RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 GOLGA6L1Q8N7Z2 621 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 ORAI2Q96SN7 254 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 GGNBP2Q9H3C7 697 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 CWC15Q9P013 229 aaKnown RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 XPCQ01831 940 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 RASSF7Q02833 373 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 SF3B2Q13435 895 aaKnown RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 RABEP1Q15276 862 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 TNPO1Q92973 898 aaKnown RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 NUDT16Q96DE0 195 aaKnown RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 DRC1Q96MC2 740 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 MYCBPQ99417 103 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 BSDC1Q9NW68 430 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 STK24Q9Y6E0 443 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 ATP7BP35670 1465 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 CDK12Q9NYV4 1490 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 NPHP4O75161 1426 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 NSD3Q9BZ95 1437 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 SND1Q7KZF4 910 aaKnown RBP eCLIP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 NME9Q86XW9 330 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 KRT222Q8N1A0 295 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 DDX41Q9UJV9 622 aaKnown RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 EID1Q9Y6B2 187 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 NALCNQ8IZF0 1738 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 CHD2O14647 1828 aaKnown RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 COL6A1P12109 1028 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 HDAC1Q13547 482 aaPredicted RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 ZC3H12AQ5D1E8 599 aaKnown RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 CCDC181Q5TID7 509 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 TXLNBQ8N3L3 684 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 MUC3BQ9H195 1237 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 MAGEC2Q9UBF1 373 aaPredicted RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 PHF8Q9UPP1 1060 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 KNSTRNQ9Y448 316 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 KIF2AO00139 706 aaPredicted RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 EPB41L2O43491 1005 aaKnown RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 PPP2R1AP30153 589 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 NUTM2GQ5VZR2 741 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 OXER1Q8TDS5 423 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 UTP14AQ9BVJ6 771 aaKnown RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 FEZ2Q9UHY8 353 aaPredicted RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 GNEQ9Y223 722 aaKnown RBP5.25□□□□□ -1.57
LRIT3-202ENST00000594814 FAN1Q9Y2M0 1017 aa5.25□□□□□ -1.57
LRIT3-202ENST00000594814 MCM6Q14566 821 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 CADPS2Q86UW7 1296 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 CPSF1Q10570 1443 aaKnown RBP5.24□□□□□ -1.57
LRIT3-202ENST00000594814 KIF3CO14782 793 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 TERF2Q15554 542 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 MIGA1Q8NAN2 632 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 NCAPGQ9BPX3 1015 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 RAI14Q9P0K7 980 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 RBM27Q9P2N5 1060 aaKnown RBP5.24□□□□□ -1.57
LRIT3-202ENST00000594814 EVC2Q86UK5 1308 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 PPIP5K1Q6PFW1 1433 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 K7ELQ4 463 aaPredicted RBP5.24□□□□□ -1.57
LRIT3-202ENST00000594814 TEX35Q5T0J7 233 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 GAS2L3Q86XJ1 694 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 SYNPO2Q9UMS6 1093 aa5.24□□□□□ -1.57
LRIT3-202ENST00000594814 XIRP1Q702N8 1843 aaKnown RBP5.23□□□□□ -1.57
LRIT3-202ENST00000594814 ACEP12821 1306 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 FAM135BQ49AJ0 1406 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 KNDC1Q76NI1 1749 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 SMTNL1A8MU46 457 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 SLFN14P0C7P3 912 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 CD151P48509 253 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 C11orf96Q7Z7L8 435 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 ZNF710Q8N1W2 664 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 NHSL1Q5SYE7 1610 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 GPR37O15354 613 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 HTATSF1O43719 755 aaKnown RBP5.23□□□□□ -1.57
LRIT3-202ENST00000594814 CYP2E1P05181 493 aaPredicted RBP5.23□□□□□ -1.57
LRIT3-202ENST00000594814 MCM2P49736 904 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 ZSCAN23Q3MJ62 389 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 HSP90AB3PQ58FF7 597 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.23□□□□□ -1.57
LRIT3-202ENST00000594814 KCND1Q9NSA2 647 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 ADAMTS8Q9UP79 889 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 HDAC5Q9UQL6 1122 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 DDX49Q9Y6V7 483 aaKnown RBP5.23□□□□□ -1.57
LRIT3-202ENST00000594814 DIP2AQ14689 1571 aa5.23□□□□□ -1.57
LRIT3-202ENST00000594814 PRR29P0C7W0 189 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 NEFHP12036 1026 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 GPS2Q13227 327 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 NOLC1Q14978 699 aaKnown RBP eCLIP5.22□□□□□ -1.57
LRIT3-202ENST00000594814 PUS10Q3MIT2 529 aaKnown RBP5.22□□□□□ -1.57
LRIT3-202ENST00000594814 IQUBQ8NA54 791 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 ZNF397Q8NF99 534 aaPredicted RBP5.22□□□□□ -1.57
LRIT3-202ENST00000594814 PSD3Q9NYI0 1048 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 SSH2Q76I76 1423 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 TMEM88BA6NKF7 163 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 NEMFO60524 1076 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 FLIIQ13045 1269 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 RRS1Q15050 365 aaKnown RBP5.22□□□□□ -1.57
LRIT3-202ENST00000594814 PLBD1Q6P4A8 553 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 MSL3Q8N5Y2 521 aaKnown RBP5.22□□□□□ -1.57
LRIT3-202ENST00000594814 FAM107BQ9H098 131 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 GOLGA6CA6NDK9 693 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 GOLGA6BA6NDN3 693 aa5.22□□□□□ -1.57
LRIT3-202ENST00000594814 A6NJY4 79 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms