RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 NRXN2Q9P2S2 1712 aa14.44□□□□□ -0.1
XRCC1-204ENST00000594511 ANXA1P04083 346 aa14.44□□□□□ -0.1
XRCC1-204ENST00000594511 BRPF1P55201 1214 aaPredicted RBP14.44□□□□□ -0.1
XRCC1-204ENST00000594511 GIGYF2Q6Y7W6 1299 aaKnown RBP14.44□□□□□ -0.1
XRCC1-204ENST00000594511 XAGE3Q8WTP9 111 aa14.44□□□□□ -0.1
XRCC1-204ENST00000594511 NECTIN2Q92692 538 aa14.44□□□□□ -0.1
XRCC1-204ENST00000594511 NUP98P52948 1817 aa14.43□□□□□ -0.1
XRCC1-204ENST00000594511 NFIXQ14938 502 aa14.43□□□□□ -0.1
XRCC1-204ENST00000594511 HLFQ16534 295 aa14.43□□□□□ -0.1
XRCC1-204ENST00000594511 NPM2Q86SE8 214 aaKnown RBP14.43□□□□□ -0.1
XRCC1-204ENST00000594511 PLBD2Q8NHP8 589 aa14.43□□□□□ -0.1
XRCC1-204ENST00000594511 ATP10DQ9P241 1426 aa14.42□□□□□ -0.1
XRCC1-204ENST00000594511 POLRMTO00411 1230 aaKnown RBP14.42□□□□□ -0.1
XRCC1-204ENST00000594511 MMP10P09238 476 aa14.42□□□□□ -0.1
XRCC1-204ENST00000594511 POLD1P28340 1107 aa14.42□□□□□ -0.1
XRCC1-204ENST00000594511 DDR1Q08345 913 aa14.42□□□□□ -0.1
XRCC1-204ENST00000594511 ALDH1L2Q3SY69 923 aa14.42□□□□□ -0.1
XRCC1-204ENST00000594511 TBC1D9BQ66K14 1250 aa14.42□□□□□ -0.1
XRCC1-204ENST00000594511 MSL1Q68DK7 614 aa14.42□□□□□ -0.1
XRCC1-204ENST00000594511 ZNF34Q8IZ26 560 aa14.42□□□□□ -0.1
XRCC1-204ENST00000594511 ARXQ96QS3 562 aa14.42□□□□□ -0.1
XRCC1-204ENST00000594511 PHAXQ9H814 394 aaKnown RBP14.42□□□□□ -0.1
XRCC1-204ENST00000594511 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
XRCC1-204ENST00000594511 TRIM28Q13263 835 aaKnown RBP14.41□□□□□ -0.1
XRCC1-204ENST00000594511 KIF6Q6ZMV9 814 aa14.41□□□□□ -0.1
XRCC1-204ENST00000594511 ANKRD13DQ6ZTN6 518 aa14.41□□□□□ -0.1
XRCC1-204ENST00000594511 STK31Q9BXU1 1019 aa14.41□□□□□ -0.1
XRCC1-204ENST00000594511 ZNF652Q9Y2D9 606 aa14.41□□□□□ -0.1
XRCC1-204ENST00000594511 ZNF330Q9Y3S2 320 aaPredicted RBP14.41□□□□□ -0.1
XRCC1-204ENST00000594511 KIF13BQ9NQT8 1826 aa14.41□□□□□ -0.1
XRCC1-204ENST00000594511 AFDNP55196 1824 aaKnown RBP14.39□□□□□ -0.11
XRCC1-204ENST00000594511 TCIRG1Q13488 830 aa14.39□□□□□ -0.11
XRCC1-204ENST00000594511 G2E3Q7L622 706 aa14.39□□□□□ -0.11
XRCC1-204ENST00000594511 MRPL50Q8N5N7 158 aaKnown RBP14.39□□□□□ -0.11
XRCC1-204ENST00000594511 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
XRCC1-204ENST00000594511 PARP3Q9Y6F1 533 aa14.39□□□□□ -0.11
XRCC1-204ENST00000594511 IBTKQ9P2D0 1353 aaPredicted RBP14.38□□□□□ -0.11
XRCC1-204ENST00000594511 SERPINB2P05120 415 aa14.38□□□□□ -0.11
XRCC1-204ENST00000594511 HSP90AB3PQ58FF7 597 aa14.38□□□□□ -0.11
XRCC1-204ENST00000594511 KSR2Q6VAB6 950 aa14.38□□□□□ -0.11
XRCC1-204ENST00000594511 SSH1Q8WYL5 1049 aa14.38□□□□□ -0.11
XRCC1-204ENST00000594511 SETDB2Q96T68 719 aa14.38□□□□□ -0.11
XRCC1-204ENST00000594511 ZBTB3Q9H5J0 574 aa14.38□□□□□ -0.11
XRCC1-204ENST00000594511 CD2APQ9Y5K6 639 aa14.38□□□□□ -0.11
XRCC1-204ENST00000594511 ANKRD36CQ5JPF3 1778 aa14.37□□□□□ -0.11
XRCC1-204ENST00000594511 ADCY9O60503 1353 aa14.37□□□□□ -0.11
XRCC1-204ENST00000594511 CARMIL3Q8ND23 1372 aa14.37□□□□□ -0.11
XRCC1-204ENST00000594511 RARSP54136 660 aaKnown RBP14.37□□□□□ -0.11
XRCC1-204ENST00000594511 AIMP1Q12904 312 aaKnown RBP14.37□□□□□ -0.11
XRCC1-204ENST00000594511 FLIIQ13045 1269 aa14.37□□□□□ -0.11
XRCC1-204ENST00000594511 PARP10Q53GL7 1025 aa14.37□□□□□ -0.11
XRCC1-204ENST00000594511 C10orf71Q711Q0 1435 aa14.37□□□□□ -0.11
XRCC1-204ENST00000594511 ARFGEF2Q9Y6D5 1785 aa14.37□□□□□ -0.11
XRCC1-204ENST00000594511 TCERG1O14776 1098 aaKnown RBP14.36□□□□□ -0.11
XRCC1-204ENST00000594511 DDX58O95786 925 aaKnown RBP14.36□□□□□ -0.11
XRCC1-204ENST00000594511 METTL22Q9BUU2 404 aaPredicted RBP14.36□□□□□ -0.11
XRCC1-204ENST00000594511 NIP7Q9Y221 180 aaKnown RBP eCLIP14.36□□□□□ -0.11
XRCC1-204ENST00000594511 SRCAPQ6ZRS2 3230 aa14.36□□□□□ -0.11
XRCC1-204ENST00000594511 UBN2Q6ZU65 1347 aa14.36□□□□□ -0.11
XRCC1-204ENST00000594511 KLRG2A4D1S0 409 aaPredicted RBP14.35□□□□□ -0.11
XRCC1-204ENST00000594511 PI4KAP2A4QPH2 592 aa14.35□□□□□ -0.11
XRCC1-204ENST00000594511 NLRP10Q86W26 655 aa14.35□□□□□ -0.11
XRCC1-204ENST00000594511 PI4KAP1Q8N8J0 262 aa14.35□□□□□ -0.11
XRCC1-204ENST00000594511 SYT17Q9BSW7 474 aa14.35□□□□□ -0.11
XRCC1-204ENST00000594511 RNF123Q5XPI4 1314 aa14.35□□□□□ -0.11
XRCC1-204ENST00000594511 KIAA1551Q9HCM1 1747 aa14.35□□□□□ -0.11
XRCC1-204ENST00000594511 RIC1Q4ADV7 1423 aa14.34□□□□□ -0.11
XRCC1-204ENST00000594511 TGFB2P61812 414 aa14.34□□□□□ -0.11
XRCC1-204ENST00000594511 SLC10A5Q5PT55 438 aa14.34□□□□□ -0.11
XRCC1-204ENST00000594511 SUSD4Q5VX71 490 aa14.34□□□□□ -0.11
XRCC1-204ENST00000594511 PRR5LQ6MZQ0 368 aa14.34□□□□□ -0.11
XRCC1-204ENST00000594511 TPTE2Q6XPS3 522 aa14.34□□□□□ -0.11
XRCC1-204ENST00000594511 RIC3Q7Z5B4 369 aa14.34□□□□□ -0.11
XRCC1-204ENST00000594511 FHDC1Q9C0D6 1143 aaPredicted RBP14.34□□□□□ -0.11
XRCC1-204ENST00000594511 PTPRCP08575 1304 aa14.34□□□□□ -0.11
XRCC1-204ENST00000594511 NTSR2O95665 410 aa14.33□□□□□ -0.12
XRCC1-204ENST00000594511 IGKV5-2P06315 115 aa14.33□□□□□ -0.12
XRCC1-204ENST00000594511 BICDL1Q6ZP65 573 aa14.33□□□□□ -0.12
XRCC1-204ENST00000594511 ARHGAP45Q92619 1136 aa14.33□□□□□ -0.12
XRCC1-204ENST00000594511 NYXQ9GZU5 481 aa14.33□□□□□ -0.12
XRCC1-204ENST00000594511 MAP3K2Q9Y2U5 619 aa14.33□□□□□ -0.12
XRCC1-204ENST00000594511 ANKRD31Q8N7Z5 1873 aa14.32□□□□□ -0.12
XRCC1-204ENST00000594511 PPP1R42Q7Z4L9 355 aa14.32□□□□□ -0.12
XRCC1-204ENST00000594511 CCDC191Q8NCU4 936 aa14.32□□□□□ -0.12
XRCC1-204ENST00000594511 DNAAF4Q8WXU2 420 aa14.32□□□□□ -0.12
XRCC1-204ENST00000594511 BRIP1Q9BX63 1249 aa14.32□□□□□ -0.12
XRCC1-204ENST00000594511 PPP1R1BQ9UD71 204 aaPredicted RBP14.32□□□□□ -0.12
XRCC1-204ENST00000594511 PDZRN3Q9UPQ7 1066 aa14.32□□□□□ -0.12
XRCC1-204ENST00000594511 KCNA3P22001 575 aa14.31□□□□□ -0.12
XRCC1-204ENST00000594511 FKBP5Q13451 457 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-204ENST00000594511 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-204ENST00000594511 GPTP24298 496 aa14.3□□□□□ -0.12
XRCC1-204ENST00000594511 BEND3Q5T5X7 828 aa14.3□□□□□ -0.12
XRCC1-204ENST00000594511 CNBD1Q8NA66 436 aa14.3□□□□□ -0.12
XRCC1-204ENST00000594511 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
XRCC1-204ENST00000594511 UTP14AQ9BVJ6 771 aaKnown RBP14.3□□□□□ -0.12
XRCC1-204ENST00000594511 SMC4Q9NTJ3 1288 aa14.3□□□□□ -0.12
XRCC1-204ENST00000594511 PXDNLA1KZ92 1463 aa14.3□□□□□ -0.12
XRCC1-204ENST00000594511 NEURL1BA8MQ27 555 aa14.29□□□□□ -0.12
XRCC1-204ENST00000594511 ATP5J2-PTCD1G3V325 749 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms