RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 KDM3BQ7LBC6 1761 aa20.77■□□□□ 0.91
USHBP1-204ENST00000594190 APLP1P51693 650 aa20.76■□□□□ 0.91
USHBP1-204ENST00000594190 TTC5Q8N0Z6 440 aa20.76■□□□□ 0.91
USHBP1-204ENST00000594190 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.75■□□□□ 0.91
USHBP1-204ENST00000594190 LAMB4A4D0S4 1761 aa20.74■□□□□ 0.91
USHBP1-204ENST00000594190 TOMM70O94826 608 aa20.74■□□□□ 0.91
USHBP1-204ENST00000594190 STARD3NLO95772 234 aa20.74■□□□□ 0.91
USHBP1-204ENST00000594190 COL11A2P13942 1736 aaPredicted RBP20.74■□□□□ 0.91
USHBP1-204ENST00000594190 CANXP27824 592 aaKnown RBP20.74■□□□□ 0.91
USHBP1-204ENST00000594190 TEX13AQ9BXU3 409 aaPredicted RBP20.74■□□□□ 0.91
USHBP1-204ENST00000594190 CHRNA5P30532 468 aa20.73■□□□□ 0.91
USHBP1-204ENST00000594190 FMNL2Q96PY5 1086 aa20.73■□□□□ 0.91
USHBP1-204ENST00000594190 PIM2Q9P1W9 311 aa20.73■□□□□ 0.91
USHBP1-204ENST00000594190 CARMIL3Q8ND23 1372 aa20.72■□□□□ 0.91
USHBP1-204ENST00000594190 BTBD11A6QL63 1104 aa20.72■□□□□ 0.91
USHBP1-204ENST00000594190 IL6STP40189 918 aaPredicted RBP20.72■□□□□ 0.91
USHBP1-204ENST00000594190 CCDC88AQ3V6T2 1871 aa20.71■□□□□ 0.91
USHBP1-204ENST00000594190 CHL1O00533 1208 aa20.71■□□□□ 0.91
USHBP1-204ENST00000594190 SERPINB2P05120 415 aa20.71■□□□□ 0.91
USHBP1-204ENST00000594190 RRP1P56182 461 aaKnown RBP20.71■□□□□ 0.91
USHBP1-204ENST00000594190 MCM10Q7L590 875 aa20.71■□□□□ 0.91
USHBP1-204ENST00000594190 PRAMEF22A3QJZ6 481 aa20.7■□□□□ 0.9
USHBP1-204ENST00000594190 A1BGP04217 495 aa20.7■□□□□ 0.9
USHBP1-204ENST00000594190 ARHGAP27Q6ZUM4 889 aa20.7■□□□□ 0.9
USHBP1-204ENST00000594190 THUMPD2Q9BTF0 503 aaKnown RBP20.7■□□□□ 0.9
USHBP1-204ENST00000594190 USP16Q9Y5T5 823 aa20.7■□□□□ 0.9
USHBP1-204ENST00000594190 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
USHBP1-204ENST00000594190 A0A087WZG4 1122 aa20.69■□□□□ 0.9
USHBP1-204ENST00000594190 DCTN1Q14203 1278 aa20.69■□□□□ 0.9
USHBP1-204ENST00000594190 TBC1D9BQ66K14 1250 aa20.69■□□□□ 0.9
USHBP1-204ENST00000594190 TSR2Q969E8 191 aaKnown RBP20.69■□□□□ 0.9
USHBP1-204ENST00000594190 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
USHBP1-204ENST00000594190 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
USHBP1-204ENST00000594190 CAMTA2O94983 1202 aa20.68■□□□□ 0.9
USHBP1-204ENST00000594190 EXOSC9Q06265 439 aaKnown RBP20.68■□□□□ 0.9
USHBP1-204ENST00000594190 TAF7Q15545 349 aaPredicted RBP20.68■□□□□ 0.9
USHBP1-204ENST00000594190 DALRD3Q5D0E6 543 aaKnown RBP20.68■□□□□ 0.9
USHBP1-204ENST00000594190 FER1L6Q2WGJ9 1857 aa20.67■□□□□ 0.9
USHBP1-204ENST00000594190 TBC1D2BQ9UPU7 963 aa20.67■□□□□ 0.9
USHBP1-204ENST00000594190 ALDH1L2Q3SY69 923 aa20.66■□□□□ 0.9
USHBP1-204ENST00000594190 DNAJC5GQ8N7S2 189 aa20.66■□□□□ 0.9
USHBP1-204ENST00000594190 DICER1Q9UPY3 1922 aaKnown RBP20.65■□□□□ 0.9
USHBP1-204ENST00000594190 CACNA1SQ13698 1873 aa20.65■□□□□ 0.9
USHBP1-204ENST00000594190 RARSP54136 660 aaKnown RBP20.65■□□□□ 0.9
USHBP1-204ENST00000594190 CHMP4AQ9BY43 222 aa20.65■□□□□ 0.9
USHBP1-204ENST00000594190 NMRK2Q9NPI5 230 aa20.65■□□□□ 0.9
USHBP1-204ENST00000594190 NBPF26B4DH59 902 aa20.64■□□□□ 0.89
USHBP1-204ENST00000594190 PRELPP51888 382 aa20.64■□□□□ 0.89
USHBP1-204ENST00000594190 NBPF10Q6P3W6 841 aaKnown RBP20.64■□□□□ 0.89
USHBP1-204ENST00000594190 C16orf71Q8IYS4 520 aaPredicted RBP20.64■□□□□ 0.89
USHBP1-204ENST00000594190 NBPF15Q8N660 670 aa20.64■□□□□ 0.89
USHBP1-204ENST00000594190 TSPYL4Q9UJ04 414 aa20.64■□□□□ 0.89
USHBP1-204ENST00000594190 NUP98P52948 1817 aa20.63■□□□□ 0.89
USHBP1-204ENST00000594190 SLX4Q8IY92 1834 aa20.63■□□□□ 0.89
USHBP1-204ENST00000594190 SNRPA1P09661 255 aaKnown RBP20.63■□□□□ 0.89
USHBP1-204ENST00000594190 C9orf131Q5VYM1 1079 aa20.63■□□□□ 0.89
USHBP1-204ENST00000594190 PRR5LQ6MZQ0 368 aa20.63■□□□□ 0.89
USHBP1-204ENST00000594190 TIAM2Q8IVF5 1701 aa20.63■□□□□ 0.89
USHBP1-204ENST00000594190 TNRC6CQ9HCJ0 1690 aaKnown RBP20.63■□□□□ 0.89
USHBP1-204ENST00000594190 WDR90Q96KV7 1748 aa20.62■□□□□ 0.89
USHBP1-204ENST00000594190 PIP4K2AP48426 406 aaPredicted RBP20.62■□□□□ 0.89
USHBP1-204ENST00000594190 BRPF1P55201 1214 aaPredicted RBP20.62■□□□□ 0.89
USHBP1-204ENST00000594190 RBM46Q8TBY0 533 aaKnown RBP20.62■□□□□ 0.89
USHBP1-204ENST00000594190 MS4A1P11836 297 aa20.61■□□□□ 0.89
USHBP1-204ENST00000594190 TWISTNBQ3B726 338 aaPredicted RBP20.61■□□□□ 0.89
USHBP1-204ENST00000594190 BICDL1Q6ZP65 573 aa20.61■□□□□ 0.89
USHBP1-204ENST00000594190 RGL2O15211 777 aa20.6■□□□□ 0.89
USHBP1-204ENST00000594190 DZIP3Q86Y13 1208 aaKnown RBP20.6■□□□□ 0.89
USHBP1-204ENST00000594190 BRIP1Q9BX63 1249 aa20.6■□□□□ 0.89
USHBP1-204ENST00000594190 KIF16BQ96L93 1317 aa20.59■□□□□ 0.89
USHBP1-204ENST00000594190 VAMP4O75379 141 aa20.59■□□□□ 0.89
USHBP1-204ENST00000594190 CLEC4GQ6UXB4 293 aa20.59■□□□□ 0.89
USHBP1-204ENST00000594190 C2CD5Q86YS7 1000 aa20.59■□□□□ 0.89
USHBP1-204ENST00000594190 MIS18AQ9NYP9 233 aa20.59■□□□□ 0.89
USHBP1-204ENST00000594190 PDE3AQ14432 1141 aa20.58■□□□□ 0.89
USHBP1-204ENST00000594190 TTLL6Q8N841 843 aa20.58■□□□□ 0.89
USHBP1-204ENST00000594190 KDM2BQ8NHM5 1336 aa20.57■□□□□ 0.88
USHBP1-204ENST00000594190 H0YIN7 160 aa20.57■□□□□ 0.88
USHBP1-204ENST00000594190 IPO8O15397 1037 aaKnown RBP20.57■□□□□ 0.88
USHBP1-204ENST00000594190 HOXB7P09629 217 aa20.57■□□□□ 0.88
USHBP1-204ENST00000594190 RASSF7Q02833 373 aa20.57■□□□□ 0.88
USHBP1-204ENST00000594190 FSTL1Q12841 308 aa20.57■□□□□ 0.88
USHBP1-204ENST00000594190 SMC4Q9NTJ3 1288 aa20.57■□□□□ 0.88
USHBP1-204ENST00000594190 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
USHBP1-204ENST00000594190 NFKBIEO00221 500 aa20.56■□□□□ 0.88
USHBP1-204ENST00000594190 BCAR3O75815 825 aa20.56■□□□□ 0.88
USHBP1-204ENST00000594190 EIF4A1P60842 406 aaKnown RBP20.56■□□□□ 0.88
USHBP1-204ENST00000594190 CCDC24Q8N4L8 307 aa20.56■□□□□ 0.88
USHBP1-204ENST00000594190 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
USHBP1-204ENST00000594190 SETDB2Q96T68 719 aa20.56■□□□□ 0.88
USHBP1-204ENST00000594190 PDZRN3Q9UPQ7 1066 aa20.56■□□□□ 0.88
USHBP1-204ENST00000594190 PDE6BP35913 854 aa20.55■□□□□ 0.88
USHBP1-204ENST00000594190 C8orf58Q8NAV2 365 aa20.55■□□□□ 0.88
USHBP1-204ENST00000594190 SSH1Q8WYL5 1049 aa20.55■□□□□ 0.88
USHBP1-204ENST00000594190 RNF181Q9P0P0 153 aa20.55■□□□□ 0.88
USHBP1-204ENST00000594190 ZC3H4Q9UPT8 1303 aaKnown RBP20.54■□□□□ 0.88
USHBP1-204ENST00000594190 CACNA1FO60840 1977 aa20.54■□□□□ 0.88
USHBP1-204ENST00000594190 KLRG2A4D1S0 409 aaPredicted RBP20.54■□□□□ 0.88
USHBP1-204ENST00000594190 SRGNP10124 158 aa20.53■□□□□ 0.88
USHBP1-204ENST00000594190 HTRA3P83110 453 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms