RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 PRAMEF22A3QJZ6 481 aa22.19■■□□□ 1.14
LTBP4-209ENST00000594116 TOMM70O94826 608 aa22.19■■□□□ 1.14
LTBP4-209ENST00000594116 NEUROD2Q15784 382 aa22.19■■□□□ 1.14
LTBP4-209ENST00000594116 PRR5LQ6MZQ0 368 aa22.19■■□□□ 1.14
LTBP4-209ENST00000594116 DZIP3Q86Y13 1208 aaKnown RBP22.19■■□□□ 1.14
LTBP4-209ENST00000594116 BRIP1Q9BX63 1249 aa22.19■■□□□ 1.14
LTBP4-209ENST00000594116 NMRK2Q9NPI5 230 aa22.19■■□□□ 1.14
LTBP4-209ENST00000594116 TNRC6CQ9HCJ0 1690 aaKnown RBP22.19■■□□□ 1.14
LTBP4-209ENST00000594116 ZC3H4Q9UPT8 1303 aaKnown RBP22.18■■□□□ 1.14
LTBP4-209ENST00000594116 PDE6BP35913 854 aa22.18■■□□□ 1.14
LTBP4-209ENST00000594116 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
LTBP4-209ENST00000594116 TAF7Q15545 349 aaPredicted RBP22.18■■□□□ 1.14
LTBP4-209ENST00000594116 SETDB2Q96T68 719 aa22.18■■□□□ 1.14
LTBP4-209ENST00000594116 KDM2BQ8NHM5 1336 aa22.17■■□□□ 1.14
LTBP4-209ENST00000594116 ZNF521Q96K83 1311 aa22.17■■□□□ 1.14
LTBP4-209ENST00000594116 CCDC88AQ3V6T2 1871 aa22.16■■□□□ 1.14
LTBP4-209ENST00000594116 PIP4K2AP48426 406 aaPredicted RBP22.16■■□□□ 1.14
LTBP4-209ENST00000594116 RASSF7Q02833 373 aa22.16■■□□□ 1.14
LTBP4-209ENST00000594116 CLEC4GQ6UXB4 293 aa22.16■■□□□ 1.14
LTBP4-209ENST00000594116 CNBD1Q8NA66 436 aa22.16■■□□□ 1.14
LTBP4-209ENST00000594116 TIAM2Q8IVF5 1701 aa22.16■■□□□ 1.14
LTBP4-209ENST00000594116 ARFGEF2Q9Y6D5 1785 aa22.15■■□□□ 1.14
LTBP4-209ENST00000594116 RGL2O15211 777 aa22.15■■□□□ 1.14
LTBP4-209ENST00000594116 WWC1Q8IX03 1113 aa22.15■■□□□ 1.14
LTBP4-209ENST00000594116 FER1L6Q2WGJ9 1857 aa22.14■■□□□ 1.13
LTBP4-209ENST00000594116 LMNB1P20700 586 aa22.14■■□□□ 1.13
LTBP4-209ENST00000594116 ZNF652Q9Y2D9 606 aa22.14■■□□□ 1.13
LTBP4-209ENST00000594116 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
LTBP4-209ENST00000594116 NBPF26B4DH59 902 aa22.13■■□□□ 1.13
LTBP4-209ENST00000594116 NBPF10Q6P3W6 841 aaKnown RBP22.13■■□□□ 1.13
LTBP4-209ENST00000594116 NBPF15Q8N660 670 aa22.13■■□□□ 1.13
LTBP4-209ENST00000594116 SALL2Q9Y467 1007 aaPredicted RBP22.13■■□□□ 1.13
LTBP4-209ENST00000594116 CACNA1SQ13698 1873 aa22.12■■□□□ 1.13
LTBP4-209ENST00000594116 ST5P78524 1137 aa22.12■■□□□ 1.13
LTBP4-209ENST00000594116 CCDC24Q8N4L8 307 aa22.12■■□□□ 1.13
LTBP4-209ENST00000594116 RBM46Q8TBY0 533 aaKnown RBP22.12■■□□□ 1.13
LTBP4-209ENST00000594116 ZNF622Q969S3 477 aaKnown RBP eCLIP22.12■■□□□ 1.13
LTBP4-209ENST00000594116 NFKBIEO00221 500 aa22.11■■□□□ 1.13
LTBP4-209ENST00000594116 NPHP1O15259 732 aa22.11■■□□□ 1.13
LTBP4-209ENST00000594116 PRELPP51888 382 aa22.11■■□□□ 1.13
LTBP4-209ENST00000594116 THUMPD2Q9BTF0 503 aaKnown RBP22.11■■□□□ 1.13
LTBP4-209ENST00000594116 MIS18AQ9NYP9 233 aa22.11■■□□□ 1.13
LTBP4-209ENST00000594116 DICER1Q9UPY3 1922 aaKnown RBP22.11■■□□□ 1.13
LTBP4-209ENST00000594116 WDR63Q8IWG1 891 aa22.1■■□□□ 1.13
LTBP4-209ENST00000594116 C16orf71Q8IYS4 520 aaPredicted RBP22.1■■□□□ 1.13
LTBP4-209ENST00000594116 SLX4Q8IY92 1834 aa22.09■■□□□ 1.13
LTBP4-209ENST00000594116 SRGNP10124 158 aa22.09■■□□□ 1.13
LTBP4-209ENST00000594116 APLP1P51693 650 aa22.09■■□□□ 1.13
LTBP4-209ENST00000594116 STYK1Q6J9G0 422 aa22.09■■□□□ 1.13
LTBP4-209ENST00000594116 IL16Q14005 1332 aa22.08■■□□□ 1.13
LTBP4-209ENST00000594116 CALD1Q05682 793 aaKnown RBP22.08■■□□□ 1.13
LTBP4-209ENST00000594116 NBPF5PQ86XG9 351 aaPredicted RBP22.08■■□□□ 1.13
LTBP4-209ENST00000594116 CNKSR1Q969H4 720 aa22.08■■□□□ 1.13
LTBP4-209ENST00000594116 C21orf2O43822 256 aa22.07■■□□□ 1.12
LTBP4-209ENST00000594116 RRAGCQ9HB90 399 aa22.07■■□□□ 1.12
LTBP4-209ENST00000594116 LTBP3Q9NS15 1303 aa22.06■■□□□ 1.12
LTBP4-209ENST00000594116 WDR90Q96KV7 1748 aa22.06■■□□□ 1.12
LTBP4-209ENST00000594116 GLTPD2A6NH11 291 aa22.06■■□□□ 1.12
LTBP4-209ENST00000594116 EIF4A1P60842 406 aaKnown RBP22.06■■□□□ 1.12
LTBP4-209ENST00000594116 FSTL1Q12841 308 aa22.06■■□□□ 1.12
LTBP4-209ENST00000594116 MASTLQ96GX5 879 aa22.06■■□□□ 1.12
LTBP4-209ENST00000594116 NUP98P52948 1817 aa22.06■■□□□ 1.12
LTBP4-209ENST00000594116 PRPF40BQ6NWY9 871 aaKnown RBP22.05■■□□□ 1.12
LTBP4-209ENST00000594116 YTHDC1Q96MU7 727 aaKnown RBP22.05■■□□□ 1.12
LTBP4-209ENST00000594116 NIP7Q9Y221 180 aaKnown RBP eCLIP22.05■■□□□ 1.12
LTBP4-209ENST00000594116 KLRG2A4D1S0 409 aaPredicted RBP22.04■■□□□ 1.12
LTBP4-209ENST00000594116 ZNF853P0CG23 659 aa22.04■■□□□ 1.12
LTBP4-209ENST00000594116 SOGA3Q5TF21 947 aa22.04■■□□□ 1.12
LTBP4-209ENST00000594116 TPTE2Q6XPS3 522 aa22.04■■□□□ 1.12
LTBP4-209ENST00000594116 IFT57Q9NWB7 429 aa22.04■■□□□ 1.12
LTBP4-209ENST00000594116 BABAM1Q9NWV8 329 aa22.04■■□□□ 1.12
LTBP4-209ENST00000594116 GOLGA2Q08379 1002 aa22.03■■□□□ 1.12
LTBP4-209ENST00000594116 CFAP44Q96MT7 982 aa22.03■■□□□ 1.12
LTBP4-209ENST00000594116 ZNF219Q9P2Y4 722 aaPredicted RBP22.03■■□□□ 1.12
LTBP4-209ENST00000594116 ERVV-1B6SEH8 477 aa22.02■■□□□ 1.12
LTBP4-209ENST00000594116 CHL1O00533 1208 aa22.02■■□□□ 1.12
LTBP4-209ENST00000594116 HLFQ16534 295 aa22.02■■□□□ 1.12
LTBP4-209ENST00000594116 TAOK3Q9H2K8 898 aa22.02■■□□□ 1.12
LTBP4-209ENST00000594116 NPR1P16066 1061 aa22.01■■□□□ 1.11
LTBP4-209ENST00000594116 GNAI1P63096 354 aa22.01■■□□□ 1.11
LTBP4-209ENST00000594116 SPINK5Q9NQ38 1064 aaPredicted RBP22.01■■□□□ 1.11
LTBP4-209ENST00000594116 ERBB4Q15303 1308 aa22.01■■□□□ 1.11
LTBP4-209ENST00000594116 MAP3K15Q6ZN16 1313 aa22.01■■□□□ 1.11
LTBP4-209ENST00000594116 VEGFAP15692 232 aaPredicted RBP22■■□□□ 1.11
LTBP4-209ENST00000594116 SLFN5Q08AF3 891 aa21.99■■□□□ 1.11
LTBP4-209ENST00000594116 ERFEQ4G0M1 354 aa21.99■■□□□ 1.11
LTBP4-209ENST00000594116 DNAJC5GQ8N7S2 189 aa21.99■■□□□ 1.11
LTBP4-209ENST00000594116 SMC1BQ8NDV3 1235 aa21.99■■□□□ 1.11
LTBP4-209ENST00000594116 C7orf43Q8WVR3 580 aa21.99■■□□□ 1.11
LTBP4-209ENST00000594116 E9PSI1 815 aa21.98■■□□□ 1.11
LTBP4-209ENST00000594116 DPY19L2Q6NUT2 758 aa21.98■■□□□ 1.11
LTBP4-209ENST00000594116 KIF6Q6ZMV9 814 aa21.98■■□□□ 1.11
LTBP4-209ENST00000594116 TRMT2AQ8IZ69 625 aaKnown RBP21.98■■□□□ 1.11
LTBP4-209ENST00000594116 CDCA7LQ96GN5 454 aa21.98■■□□□ 1.11
LTBP4-209ENST00000594116 TSPYL4Q9UJ04 414 aa21.98■■□□□ 1.11
LTBP4-209ENST00000594116 IBTKQ9P2D0 1353 aaPredicted RBP21.98■■□□□ 1.11
LTBP4-209ENST00000594116 FAM177BA6PVY3 158 aa21.97■■□□□ 1.11
LTBP4-209ENST00000594116 TTLL7Q6ZT98 887 aa21.97■■□□□ 1.11
LTBP4-209ENST00000594116 NYXQ9GZU5 481 aa21.97■■□□□ 1.11
LTBP4-209ENST00000594116 MBIPQ9NS73 344 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms