RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 NBPF10Q6P3W6 841 aaKnown RBP23.72■■□□□ 1.39
CIRBP-243ENST00000593128 NBPF15Q8N660 670 aa23.72■■□□□ 1.39
CIRBP-243ENST00000593128 TIAM2Q8IVF5 1701 aa23.72■■□□□ 1.39
CIRBP-243ENST00000593128 PLEKHF1Q96S99 279 aa23.71■■□□□ 1.39
CIRBP-243ENST00000593128 PNNQ9H307 717 aaKnown RBP23.71■■□□□ 1.39
CIRBP-243ENST00000593128 PDZRN3Q9UPQ7 1066 aa23.71■■□□□ 1.39
CIRBP-243ENST00000593128 KDM3BQ7LBC6 1761 aa23.7■■□□□ 1.39
CIRBP-243ENST00000593128 TNRC6CQ9HCJ0 1690 aaKnown RBP23.7■■□□□ 1.39
CIRBP-243ENST00000593128 PNISRQ8TF01 805 aaKnown RBP23.7■■□□□ 1.38
CIRBP-243ENST00000593128 NFKBIEO00221 500 aa23.69■■□□□ 1.38
CIRBP-243ENST00000593128 PRELPP51888 382 aa23.69■■□□□ 1.38
CIRBP-243ENST00000593128 NIP7Q9Y221 180 aaKnown RBP eCLIP23.69■■□□□ 1.38
CIRBP-243ENST00000593128 DDX10Q13206 875 aaKnown RBP23.68■■□□□ 1.38
CIRBP-243ENST00000593128 CLEC4GQ6UXB4 293 aa23.68■■□□□ 1.38
CIRBP-243ENST00000593128 APLP1P51693 650 aa23.67■■□□□ 1.38
CIRBP-243ENST00000593128 RBM46Q8TBY0 533 aaKnown RBP23.67■■□□□ 1.38
CIRBP-243ENST00000593128 CNKSR1Q969H4 720 aa23.67■■□□□ 1.38
CIRBP-243ENST00000593128 RRP7AQ9Y3A4 280 aaKnown RBP23.67■■□□□ 1.38
CIRBP-243ENST00000593128 SLX4Q8IY92 1834 aa23.66■■□□□ 1.38
CIRBP-243ENST00000593128 MYL6BP14649 208 aa23.66■■□□□ 1.38
CIRBP-243ENST00000593128 SRGNP10124 158 aa23.65■■□□□ 1.38
CIRBP-243ENST00000593128 GTF2E1P29083 439 aaPredicted RBP23.65■■□□□ 1.38
CIRBP-243ENST00000593128 RALBP1Q15311 655 aa23.65■■□□□ 1.38
CIRBP-243ENST00000593128 HLFQ16534 295 aa23.65■■□□□ 1.38
CIRBP-243ENST00000593128 STYK1Q6J9G0 422 aa23.65■■□□□ 1.38
CIRBP-243ENST00000593128 PRPF40BQ6NWY9 871 aaKnown RBP23.65■■□□□ 1.38
CIRBP-243ENST00000593128 MASTLQ96GX5 879 aa23.65■■□□□ 1.38
CIRBP-243ENST00000593128 ZC3H4Q9UPT8 1303 aaKnown RBP23.64■■□□□ 1.38
CIRBP-243ENST00000593128 TPTE2Q6XPS3 522 aa23.64■■□□□ 1.37
CIRBP-243ENST00000593128 FER1L6Q2WGJ9 1857 aa23.64■■□□□ 1.37
CIRBP-243ENST00000593128 GLTPD2A6NH11 291 aa23.63■■□□□ 1.37
CIRBP-243ENST00000593128 EIF4A1P60842 406 aaKnown RBP23.63■■□□□ 1.37
CIRBP-243ENST00000593128 ERFEQ4G0M1 354 aa23.63■■□□□ 1.37
CIRBP-243ENST00000593128 KIF6Q6ZMV9 814 aa23.63■■□□□ 1.37
CIRBP-243ENST00000593128 TSPYL4Q9UJ04 414 aa23.63■■□□□ 1.37
CIRBP-243ENST00000593128 RIPK4P57078 832 aa23.62■■□□□ 1.37
CIRBP-243ENST00000593128 TAOK3Q9H2K8 898 aa23.62■■□□□ 1.37
CIRBP-243ENST00000593128 ARFGEF2Q9Y6D5 1785 aa23.62■■□□□ 1.37
CIRBP-243ENST00000593128 WDR90Q96KV7 1748 aa23.6■■□□□ 1.37
CIRBP-243ENST00000593128 HTRA3P83110 453 aa23.6■■□□□ 1.37
CIRBP-243ENST00000593128 CCDC146Q8IYE0 955 aa23.6■■□□□ 1.37
CIRBP-243ENST00000593128 ZBTB3Q9H5J0 574 aa23.6■■□□□ 1.37
CIRBP-243ENST00000593128 NUP98P52948 1817 aa23.59■■□□□ 1.37
CIRBP-243ENST00000593128 DICER1Q9UPY3 1922 aaKnown RBP23.59■■□□□ 1.37
CIRBP-243ENST00000593128 VEGFAP15692 232 aaPredicted RBP23.59■■□□□ 1.37
CIRBP-243ENST00000593128 NPR1P16066 1061 aa23.59■■□□□ 1.37
CIRBP-243ENST00000593128 FSTL1Q12841 308 aa23.59■■□□□ 1.37
CIRBP-243ENST00000593128 NEUROD2Q15784 382 aa23.59■■□□□ 1.37
CIRBP-243ENST00000593128 DPY19L2Q6NUT2 758 aa23.59■■□□□ 1.37
CIRBP-243ENST00000593128 TTLL7Q6ZT98 887 aa23.59■■□□□ 1.37
CIRBP-243ENST00000593128 EIF2S2P20042 333 aaKnown RBP23.58■■□□□ 1.37
CIRBP-243ENST00000593128 GPTP24298 496 aa23.58■■□□□ 1.37
CIRBP-243ENST00000593128 SOGA3Q5TF21 947 aa23.58■■□□□ 1.37
CIRBP-243ENST00000593128 SMC1BQ8NDV3 1235 aa23.58■■□□□ 1.37
CIRBP-243ENST00000593128 MAP3K15Q6ZN16 1313 aa23.58■■□□□ 1.36
CIRBP-243ENST00000593128 MYBBP1AQ9BQG0 1328 aaKnown RBP23.58■■□□□ 1.36
CIRBP-243ENST00000593128 NUTM1Q86Y26 1132 aa23.57■■□□□ 1.36
CIRBP-243ENST00000593128 CCDC93Q567U6 631 aa23.56■■□□□ 1.36
CIRBP-243ENST00000593128 RGL2O15211 777 aa23.55■■□□□ 1.36
CIRBP-243ENST00000593128 TMPOP42166 694 aaKnown RBP23.55■■□□□ 1.36
CIRBP-243ENST00000593128 LMOD3Q0VAK6 560 aa23.55■■□□□ 1.36
CIRBP-243ENST00000593128 WDR43Q15061 677 aaKnown RBP eCLIP23.55■■□□□ 1.36
CIRBP-243ENST00000593128 NECTIN2Q92692 538 aa23.55■■□□□ 1.36
CIRBP-243ENST00000593128 NYXQ9GZU5 481 aa23.55■■□□□ 1.36
CIRBP-243ENST00000593128 ERVV-1B6SEH8 477 aa23.54■■□□□ 1.36
CIRBP-243ENST00000593128 OLFM4Q6UX06 510 aa23.54■■□□□ 1.36
CIRBP-243ENST00000593128 LAS1LQ9Y4W2 734 aaKnown RBP23.54■■□□□ 1.36
CIRBP-243ENST00000593128 LTBP3Q9NS15 1303 aa23.54■■□□□ 1.36
CIRBP-243ENST00000593128 ABCC12Q96J65 1359 aa23.53■■□□□ 1.36
CIRBP-243ENST00000593128 DDNO94850 711 aaPredicted RBP23.51■■□□□ 1.35
CIRBP-243ENST00000593128 ANXA1P04083 346 aa23.51■■□□□ 1.35
CIRBP-243ENST00000593128 ALDH1B1P30837 517 aa23.51■■□□□ 1.35
CIRBP-243ENST00000593128 DNAJC5GQ8N7S2 189 aa23.51■■□□□ 1.35
CIRBP-243ENST00000593128 ZNF277Q9NRM2 450 aaPredicted RBP23.51■■□□□ 1.35
CIRBP-243ENST00000593128 KLRG2A4D1S0 409 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-243ENST00000593128 SUSD4Q5VX71 490 aa23.5■■□□□ 1.35
CIRBP-243ENST00000593128 C7orf43Q8WVR3 580 aa23.5■■□□□ 1.35
CIRBP-243ENST00000593128 RPGRQ92834 1020 aaKnown RBP23.5■■□□□ 1.35
CIRBP-243ENST00000593128 UBN2Q6ZU65 1347 aa23.5■■□□□ 1.35
CIRBP-243ENST00000593128 FKBP4Q02790 459 aaKnown RBP eCLIP23.49■■□□□ 1.35
CIRBP-243ENST00000593128 ERBB4Q15303 1308 aa23.49■■□□□ 1.35
CIRBP-243ENST00000593128 POTECB2RU33 542 aa23.48■■□□□ 1.35
CIRBP-243ENST00000593128 AIMP1Q12904 312 aaKnown RBP23.48■■□□□ 1.35
CIRBP-243ENST00000593128 PROSER3Q2NL68 480 aa23.48■■□□□ 1.35
CIRBP-243ENST00000593128 RTKN2Q8IZC4 609 aa23.48■■□□□ 1.35
CIRBP-243ENST00000593128 RUNDC1Q96C34 613 aa23.48■■□□□ 1.35
CIRBP-243ENST00000593128 TCERG1O14776 1098 aaKnown RBP23.47■■□□□ 1.35
CIRBP-243ENST00000593128 GIGYF2Q6Y7W6 1299 aaKnown RBP23.47■■□□□ 1.35
CIRBP-243ENST00000593128 KRT24Q2M2I5 525 aa23.45■■□□□ 1.34
CIRBP-243ENST00000593128 PPP1R42Q7Z4L9 355 aa23.45■■□□□ 1.34
CIRBP-243ENST00000593128 ZNF34Q8IZ26 560 aa23.45■■□□□ 1.34
CIRBP-243ENST00000593128 SYNE4Q8N205 404 aa23.45■■□□□ 1.34
CIRBP-243ENST00000593128 KLRG1Q96E93 195 aa23.45■■□□□ 1.34
CIRBP-243ENST00000593128 BABAM1Q9NWV8 329 aa23.45■■□□□ 1.34
CIRBP-243ENST00000593128 ADAMTS8Q9UP79 889 aa23.45■■□□□ 1.34
CIRBP-243ENST00000593128 PDIA6Q15084 440 aa23.44■■□□□ 1.34
CIRBP-243ENST00000593128 ZNF541Q9H0D2 1346 aa23.43■■□□□ 1.34
CIRBP-243ENST00000593128 NTSR2O95665 410 aa23.43■■□□□ 1.34
CIRBP-243ENST00000593128 IARSP41252 1262 aaKnown RBP23.43■■□□□ 1.34
CIRBP-243ENST00000593128 CRY2Q49AN0 593 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms