RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 PKD1L3Q7Z443 1732 aa13.55□□□□□ -0.24
TUBD1-215ENST00000593110 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
TUBD1-215ENST00000593110 N4BP2Q86UW6 1770 aaPredicted RBP13.55□□□□□ -0.24
TUBD1-215ENST00000593110 SLC4A5Q9BY07 1137 aa13.54□□□□□ -0.24
TUBD1-215ENST00000593110 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
TUBD1-215ENST00000593110 KLRG1Q96E93 195 aa13.53□□□□□ -0.24
TUBD1-215ENST00000593110 NMRK2Q9NPI5 230 aa13.53□□□□□ -0.24
TUBD1-215ENST00000593110 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
TUBD1-215ENST00000593110 C10orf71Q711Q0 1435 aa13.53□□□□□ -0.24
TUBD1-215ENST00000593110 NSD3Q9BZ95 1437 aa13.53□□□□□ -0.24
TUBD1-215ENST00000593110 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.25
TUBD1-215ENST00000593110 FBLN1P23142 703 aa13.52□□□□□ -0.25
TUBD1-215ENST00000593110 HTRA3P83110 453 aa13.52□□□□□ -0.25
TUBD1-215ENST00000593110 NBPF6Q5VWK0 638 aa13.52□□□□□ -0.25
TUBD1-215ENST00000593110 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
TUBD1-215ENST00000593110 NBPF4Q96M43 638 aa13.52□□□□□ -0.25
TUBD1-215ENST00000593110 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
TUBD1-215ENST00000593110 SSFA2P28290 1259 aa13.51□□□□□ -0.25
TUBD1-215ENST00000593110 PROX2Q3B8N5 592 aa13.51□□□□□ -0.25
TUBD1-215ENST00000593110 GPIHBP1Q8IV16 184 aa13.51□□□□□ -0.25
TUBD1-215ENST00000593110 USHBP1Q8N6Y0 703 aa13.51□□□□□ -0.25
TUBD1-215ENST00000593110 RBM46Q8TBY0 533 aaKnown RBP13.51□□□□□ -0.25
TUBD1-215ENST00000593110 NCAPD2Q15021 1401 aa13.5□□□□□ -0.25
TUBD1-215ENST00000593110 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
TUBD1-215ENST00000593110 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
TUBD1-215ENST00000593110 CYP27B1O15528 508 aa13.5□□□□□ -0.25
TUBD1-215ENST00000593110 FCHSD2O94868 740 aa13.5□□□□□ -0.25
TUBD1-215ENST00000593110 PRELPP51888 382 aa13.5□□□□□ -0.25
TUBD1-215ENST00000593110 AK7Q96M32 723 aa13.5□□□□□ -0.25
TUBD1-215ENST00000593110 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
TUBD1-215ENST00000593110 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
TUBD1-215ENST00000593110 LINC00116Q8NCU8 138 aa13.49□□□□□ -0.25
TUBD1-215ENST00000593110 TMC1Q8TDI8 760 aa13.49□□□□□ -0.25
TUBD1-215ENST00000593110 TRIM6-TRIM34B2RNG4 842 aa13.48□□□□□ -0.25
TUBD1-215ENST00000593110 PRSS12P56730 875 aa13.48□□□□□ -0.25
TUBD1-215ENST00000593110 PTGDRQ13258 359 aa13.48□□□□□ -0.25
TUBD1-215ENST00000593110 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
TUBD1-215ENST00000593110 NPDC1Q9NQX5 325 aaPredicted RBP13.48□□□□□ -0.25
TUBD1-215ENST00000593110 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
TUBD1-215ENST00000593110 C4AP0C0L4 1744 aa13.47□□□□□ -0.25
TUBD1-215ENST00000593110 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
TUBD1-215ENST00000593110 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
TUBD1-215ENST00000593110 AMPHP49418 695 aa13.47□□□□□ -0.25
TUBD1-215ENST00000593110 MPRIPQ6WCQ1 1025 aa13.47□□□□□ -0.25
TUBD1-215ENST00000593110 KCPQ6ZWJ8 1503 aa13.47□□□□□ -0.25
TUBD1-215ENST00000593110 PLEKHG2Q9H7P9 1386 aa13.46□□□□□ -0.25
TUBD1-215ENST00000593110 MMP10P09238 476 aa13.46□□□□□ -0.25
TUBD1-215ENST00000593110 RAPGEF4Q8WZA2 1011 aa13.46□□□□□ -0.25
TUBD1-215ENST00000593110 PIGBQ92521 554 aa13.46□□□□□ -0.25
TUBD1-215ENST00000593110 SMARCC1Q92922 1105 aaPredicted RBP13.46□□□□□ -0.25
TUBD1-215ENST00000593110 COG3Q96JB2 828 aa13.46□□□□□ -0.25
TUBD1-215ENST00000593110 PUS7Q96PZ0 661 aaKnown RBP13.46□□□□□ -0.25
TUBD1-215ENST00000593110 RBM27Q9P2N5 1060 aaKnown RBP13.46□□□□□ -0.25
TUBD1-215ENST00000593110 KDRP35968 1356 aa13.45□□□□□ -0.26
TUBD1-215ENST00000593110 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
TUBD1-215ENST00000593110 FSTL1Q12841 308 aa13.45□□□□□ -0.26
TUBD1-215ENST00000593110 ITPK1Q13572 414 aa13.45□□□□□ -0.26
TUBD1-215ENST00000593110 RRS1Q15050 365 aaKnown RBP13.45□□□□□ -0.26
TUBD1-215ENST00000593110 TNS4Q8IZW8 715 aa13.45□□□□□ -0.26
TUBD1-215ENST00000593110 NBPF3Q9H094 633 aa13.45□□□□□ -0.26
TUBD1-215ENST00000593110 RABGEF1Q9UJ41 708 aa13.45□□□□□ -0.26
TUBD1-215ENST00000593110 SMG6Q86US8 1419 aaKnown RBP13.45□□□□□ -0.26
TUBD1-215ENST00000593110 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-215ENST00000593110 LOC102724428A0A0B4J2F2 783 aa13.44□□□□□ -0.26
TUBD1-215ENST00000593110 TATP17735 454 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-215ENST00000593110 SIK1P57059 783 aa13.44□□□□□ -0.26
TUBD1-215ENST00000593110 TGFB2P61812 414 aa13.44□□□□□ -0.26
TUBD1-215ENST00000593110 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
TUBD1-215ENST00000593110 SPNS2Q8IVW8 549 aa13.44□□□□□ -0.26
TUBD1-215ENST00000593110 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
TUBD1-215ENST00000593110 BCS1LQ9Y276 419 aa13.44□□□□□ -0.26
TUBD1-215ENST00000593110 INSRP06213 1382 aa13.44□□□□□ -0.26
TUBD1-215ENST00000593110 A0A0G2JLW4 131 aa13.43□□□□□ -0.26
TUBD1-215ENST00000593110 HRO43593 1189 aa13.43□□□□□ -0.26
TUBD1-215ENST00000593110 KCNA3P22001 575 aa13.43□□□□□ -0.26
TUBD1-215ENST00000593110 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
TUBD1-215ENST00000593110 KIAA1468Q9P260 1216 aa13.43□□□□□ -0.26
TUBD1-215ENST00000593110 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
TUBD1-215ENST00000593110 SBF1O95248 1867 aa13.42□□□□□ -0.26
TUBD1-215ENST00000593110 ANKRD26Q9UPS8 1709 aa13.42□□□□□ -0.26
TUBD1-215ENST00000593110 GNPATO15228 680 aa13.42□□□□□ -0.26
TUBD1-215ENST00000593110 DPEP1P16444 411 aa13.42□□□□□ -0.26
TUBD1-215ENST00000593110 HIC1Q14526 733 aa13.42□□□□□ -0.26
TUBD1-215ENST00000593110 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
TUBD1-215ENST00000593110 FLT4P35916 1363 aa13.42□□□□□ -0.26
TUBD1-215ENST00000593110 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
TUBD1-215ENST00000593110 ARHGAP27Q6ZUM4 889 aa13.41□□□□□ -0.26
TUBD1-215ENST00000593110 TESK2Q96S53 571 aa13.41□□□□□ -0.26
TUBD1-215ENST00000593110 KIF24Q5T7B8 1368 aa13.41□□□□□ -0.26
TUBD1-215ENST00000593110 KIF20BQ96Q89 1820 aa13.41□□□□□ -0.26
TUBD1-215ENST00000593110 MRPL50Q8N5N7 158 aaKnown RBP13.4□□□□□ -0.26
TUBD1-215ENST00000593110 ASAP1Q9ULH1 1129 aa13.4□□□□□ -0.26
TUBD1-215ENST00000593110 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
TUBD1-215ENST00000593110 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
TUBD1-215ENST00000593110 GPR37O15354 613 aa13.39□□□□□ -0.27
TUBD1-215ENST00000593110 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
TUBD1-215ENST00000593110 SLC4A9Q96Q91 983 aa13.39□□□□□ -0.27
TUBD1-215ENST00000593110 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
TUBD1-215ENST00000593110 MYH14Q7Z406 1995 aaKnown RBP13.39□□□□□ -0.27
TUBD1-215ENST00000593110 BHMG1C9JSJ3 638 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms