RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 CEMIPQ8WUJ3 1361 aa15.08■□□□□ 0
PRKCSH-220ENST00000593104 FAM177BA6PVY3 158 aa15.07■□□□□ 0
PRKCSH-220ENST00000593104 HSPA1AP0DMV8 641 aaKnown RBP15.07■□□□□ 0
PRKCSH-220ENST00000593104 HSPA1BP0DMV9 641 aaKnown RBP15.07■□□□□ 0
PRKCSH-220ENST00000593104 PDE6BP35913 854 aa15.07■□□□□ 0
PRKCSH-220ENST00000593104 PRPF40BQ6NWY9 871 aaKnown RBP15.06■□□□□ 0
PRKCSH-220ENST00000593104 SETDB2Q96T68 719 aa15.06■□□□□ 0
PRKCSH-220ENST00000593104 TAOK3Q9H2K8 898 aa15.06■□□□□ 0
PRKCSH-220ENST00000593104 SRGNP10124 158 aa15.05■□□□□ -0
PRKCSH-220ENST00000593104 TEX13AQ9BXU3 409 aaPredicted RBP15.05■□□□□ -0
PRKCSH-220ENST00000593104 ARFGEF2Q9Y6D5 1785 aa15.04■□□□□ -0
PRKCSH-220ENST00000593104 NPC1L1Q9UHC9 1359 aa15.04■□□□□ -0
PRKCSH-220ENST00000593104 NBPF26B4DH59 902 aa15.04■□□□□ -0
PRKCSH-220ENST00000593104 ST5P78524 1137 aa15.04■□□□□ -0
PRKCSH-220ENST00000593104 DPY19L2Q6NUT2 758 aa15.04■□□□□ -0
PRKCSH-220ENST00000593104 NBPF10Q6P3W6 841 aaKnown RBP15.04■□□□□ -0
PRKCSH-220ENST00000593104 SLC51AQ86UW1 340 aa15.04■□□□□ -0
PRKCSH-220ENST00000593104 TNS4Q8IZW8 715 aa15.04■□□□□ -0
PRKCSH-220ENST00000593104 NBPF15Q8N660 670 aa15.04■□□□□ -0
PRKCSH-220ENST00000593104 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
PRKCSH-220ENST00000593104 MKRN1Q9UHC7 482 aaKnown RBP15.04■□□□□ -0
PRKCSH-220ENST00000593104 NPM2Q86SE8 214 aaKnown RBP15.03■□□□□ -0
PRKCSH-220ENST00000593104 ZNF541Q9H0D2 1346 aa15.02■□□□□ -0
PRKCSH-220ENST00000593104 U2AF1L5P0DN76 240 aaPredicted RBP15.02■□□□□ -0
PRKCSH-220ENST00000593104 U2AF1Q01081 240 aaKnown RBP eCLIP15.02■□□□□ -0
PRKCSH-220ENST00000593104 HLFQ16534 295 aa15.02■□□□□ -0
PRKCSH-220ENST00000593104 STYK1Q6J9G0 422 aa15.02■□□□□ -0
PRKCSH-220ENST00000593104 NBPF5PQ86XG9 351 aaPredicted RBP15.02■□□□□ -0
PRKCSH-220ENST00000593104 CNKSR1Q969H4 720 aa15.02■□□□□ -0
PRKCSH-220ENST00000593104 MASTLQ96GX5 879 aa15.02■□□□□ -0
PRKCSH-220ENST00000593104 LTBP3Q9NS15 1303 aa15.01□□□□□ -0.01
PRKCSH-220ENST00000593104 NGEFQ8N5V2 710 aa15.01□□□□□ -0.01
PRKCSH-220ENST00000593104 ZNF277Q9NRM2 450 aaPredicted RBP15.01□□□□□ -0.01
PRKCSH-220ENST00000593104 PPP2R1AP30153 589 aa15□□□□□ -0.01
PRKCSH-220ENST00000593104 CHADLQ6NUI6 762 aa15□□□□□ -0.01
PRKCSH-220ENST00000593104 C7orf43Q8WVR3 580 aa15□□□□□ -0.01
PRKCSH-220ENST00000593104 NIP7Q9Y221 180 aaKnown RBP eCLIP15□□□□□ -0.01
PRKCSH-220ENST00000593104 SNRPA1P09661 255 aaKnown RBP14.99□□□□□ -0.01
PRKCSH-220ENST00000593104 CFAP53Q96M91 514 aa14.99□□□□□ -0.01
PRKCSH-220ENST00000593104 PDZRN3Q9UPQ7 1066 aa14.99□□□□□ -0.01
PRKCSH-220ENST00000593104 DLG5Q8TDM6 1919 aa14.98□□□□□ -0.01
PRKCSH-220ENST00000593104 NUTM1Q86Y26 1132 aa14.98□□□□□ -0.01
PRKCSH-220ENST00000593104 RTF1Q92541 710 aaKnown RBP14.98□□□□□ -0.01
PRKCSH-220ENST00000593104 THUMPD2Q9BTF0 503 aaKnown RBP14.98□□□□□ -0.01
PRKCSH-220ENST00000593104 ABCC12Q96J65 1359 aa14.98□□□□□ -0.01
PRKCSH-220ENST00000593104 CCDC93Q567U6 631 aa14.97□□□□□ -0.01
PRKCSH-220ENST00000593104 EAPPQ56P03 285 aaPredicted RBP14.97□□□□□ -0.01
PRKCSH-220ENST00000593104 TAF1DQ9H5J8 278 aaPredicted RBP14.97□□□□□ -0.01
PRKCSH-220ENST00000593104 PCNTO95613 3336 aa14.97□□□□□ -0.01
PRKCSH-220ENST00000593104 COL4A5P29400 1685 aa14.97□□□□□ -0.01
PRKCSH-220ENST00000593104 LAMB4A4D0S4 1761 aa14.96□□□□□ -0.01
PRKCSH-220ENST00000593104 NPR1P16066 1061 aa14.96□□□□□ -0.01
PRKCSH-220ENST00000593104 CREBZFQ9NS37 354 aa14.96□□□□□ -0.01
PRKCSH-220ENST00000593104 NUDCQ9Y266 331 aa14.96□□□□□ -0.01
PRKCSH-220ENST00000593104 RNF123Q5XPI4 1314 aa14.95□□□□□ -0.02
PRKCSH-220ENST00000593104 SCN4AP35499 1836 aa14.95□□□□□ -0.02
PRKCSH-220ENST00000593104 FKBP4Q02790 459 aaKnown RBP eCLIP14.95□□□□□ -0.02
PRKCSH-220ENST00000593104 CLEC4GQ6UXB4 293 aa14.95□□□□□ -0.02
PRKCSH-220ENST00000593104 ZNF652Q9Y2D9 606 aa14.95□□□□□ -0.02
PRKCSH-220ENST00000593104 PASKQ96RG2 1323 aa14.94□□□□□ -0.02
PRKCSH-220ENST00000593104 NUP98P52948 1817 aa14.94□□□□□ -0.02
PRKCSH-220ENST00000593104 KLRG2A4D1S0 409 aaPredicted RBP14.94□□□□□ -0.02
PRKCSH-220ENST00000593104 FOXN1O15353 648 aa14.94□□□□□ -0.02
PRKCSH-220ENST00000593104 GPTP24298 496 aa14.94□□□□□ -0.02
PRKCSH-220ENST00000593104 TPTE2Q6XPS3 522 aa14.94□□□□□ -0.02
PRKCSH-220ENST00000593104 TTLL7Q6ZT98 887 aa14.94□□□□□ -0.02
PRKCSH-220ENST00000593104 SYNE4Q8N205 404 aa14.94□□□□□ -0.02
PRKCSH-220ENST00000593104 KDM3BQ7LBC6 1761 aa14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 TCERG1O14776 1098 aaKnown RBP14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 MYL6BP14649 208 aa14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 FMR1Q06787 632 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 SOGA3Q5TF21 947 aa14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 MAP1SQ66K74 1059 aaPredicted RBP14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 LDHDQ86WU2 507 aa14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 L3MBTL3Q96JM7 780 aaPredicted RBP14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 RRP7AQ9Y3A4 280 aaKnown RBP14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 CNTNAP1P78357 1384 aa14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 ADAMTSL1Q8N6G6 1762 aa14.93□□□□□ -0.02
PRKCSH-220ENST00000593104 SNED1Q8TER0 1413 aa14.92□□□□□ -0.02
PRKCSH-220ENST00000593104 LTBP1Q14766 1721 aa14.92□□□□□ -0.02
PRKCSH-220ENST00000593104 ITGBL1O95965 494 aaPredicted RBP14.92□□□□□ -0.02
PRKCSH-220ENST00000593104 GTF2E1P29083 439 aaPredicted RBP14.92□□□□□ -0.02
PRKCSH-220ENST00000593104 IARSP41252 1262 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-220ENST00000593104 C3orf67Q6ZVT6 689 aa14.92□□□□□ -0.02
PRKCSH-220ENST00000593104 ZBTB3Q9H5J0 574 aa14.92□□□□□ -0.02
PRKCSH-220ENST00000593104 UBN2Q6ZU65 1347 aa14.92□□□□□ -0.02
PRKCSH-220ENST00000593104 IQCA1LA6NCM1 817 aa14.91□□□□□ -0.02
PRKCSH-220ENST00000593104 EPHX2P34913 555 aa14.91□□□□□ -0.02
PRKCSH-220ENST00000593104 VEGFBP49765 207 aa14.91□□□□□ -0.02
PRKCSH-220ENST00000593104 HACL1Q9UJ83 578 aa14.91□□□□□ -0.02
PRKCSH-220ENST00000593104 GJA3Q9Y6H8 435 aa14.9□□□□□ -0.02
PRKCSH-220ENST00000593104 FZD9O00144 591 aa14.89□□□□□ -0.03
PRKCSH-220ENST00000593104 EIF4A1P60842 406 aaKnown RBP14.89□□□□□ -0.03
PRKCSH-220ENST00000593104 SUSD4Q5VX71 490 aa14.89□□□□□ -0.03
PRKCSH-220ENST00000593104 RTKN2Q8IZC4 609 aa14.89□□□□□ -0.03
PRKCSH-220ENST00000593104 ZNF428Q96B54 188 aa14.89□□□□□ -0.03
PRKCSH-220ENST00000593104 MAP3K15Q6ZN16 1313 aa14.89□□□□□ -0.03
PRKCSH-220ENST00000593104 TMEM88BA6NKF7 163 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms