RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 HYPKQ9NX55 129 aa19.22■□□□□ 0.67
DDX39A-221ENST00000593026 MMP10P09238 476 aa19.21■□□□□ 0.67
DDX39A-221ENST00000593026 TTLL7Q6ZT98 887 aa19.21■□□□□ 0.67
DDX39A-221ENST00000593026 XAGE3Q8WTP9 111 aa19.21■□□□□ 0.67
DDX39A-221ENST00000593026 ZNF652Q9Y2D9 606 aa19.21■□□□□ 0.67
DDX39A-221ENST00000593026 MAP3K15Q6ZN16 1313 aa19.21■□□□□ 0.67
DDX39A-221ENST00000593026 AIMP1Q12904 312 aaKnown RBP19.2■□□□□ 0.66
DDX39A-221ENST00000593026 COPS6Q7L5N1 327 aa19.2■□□□□ 0.66
DDX39A-221ENST00000593026 ERVV-1B6SEH8 477 aa19.19■□□□□ 0.66
DDX39A-221ENST00000593026 TCERG1O14776 1098 aaKnown RBP19.19■□□□□ 0.66
DDX39A-221ENST00000593026 RGL2O15211 777 aa19.19■□□□□ 0.66
DDX39A-221ENST00000593026 CLEC4GQ6UXB4 293 aa19.19■□□□□ 0.66
DDX39A-221ENST00000593026 ZBTB3Q9H5J0 574 aa19.19■□□□□ 0.66
DDX39A-221ENST00000593026 NFIXQ14938 502 aa19.18■□□□□ 0.66
DDX39A-221ENST00000593026 PARP3Q9Y6F1 533 aa19.18■□□□□ 0.66
DDX39A-221ENST00000593026 TM4SF1P30408 202 aa19.17■□□□□ 0.66
DDX39A-221ENST00000593026 HLFQ16534 295 aa19.17■□□□□ 0.66
DDX39A-221ENST00000593026 TBC1D9BQ66K14 1250 aa19.17■□□□□ 0.66
DDX39A-221ENST00000593026 BICDL1Q6ZP65 573 aa19.17■□□□□ 0.66
DDX39A-221ENST00000593026 PHAXQ9H814 394 aaKnown RBP19.17■□□□□ 0.66
DDX39A-221ENST00000593026 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
DDX39A-221ENST00000593026 POLRMTO00411 1230 aaKnown RBP19.15■□□□□ 0.66
DDX39A-221ENST00000593026 DDR1Q08345 913 aa19.15■□□□□ 0.66
DDX39A-221ENST00000593026 GIGYF2Q6Y7W6 1299 aaKnown RBP19.15■□□□□ 0.66
DDX39A-221ENST00000593026 NUP98P52948 1817 aa19.15■□□□□ 0.66
DDX39A-221ENST00000593026 CARMIL3Q8ND23 1372 aa19.15■□□□□ 0.66
DDX39A-221ENST00000593026 PLBD2Q8NHP8 589 aa19.14■□□□□ 0.65
DDX39A-221ENST00000593026 SETDB2Q96T68 719 aa19.14■□□□□ 0.65
DDX39A-221ENST00000593026 NIP7Q9Y221 180 aaKnown RBP eCLIP19.14■□□□□ 0.65
DDX39A-221ENST00000593026 ATP10DQ9P241 1426 aa19.14■□□□□ 0.65
DDX39A-221ENST00000593026 CACNA1FO60840 1977 aa19.13■□□□□ 0.65
DDX39A-221ENST00000593026 DDX58O95786 925 aaKnown RBP19.13■□□□□ 0.65
DDX39A-221ENST00000593026 CT47B1P0C2W7 299 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-221ENST00000593026 ANKRD13DQ6ZTN6 518 aa19.13■□□□□ 0.65
DDX39A-221ENST00000593026 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
DDX39A-221ENST00000593026 ZNF428Q96B54 188 aa19.13■□□□□ 0.65
DDX39A-221ENST00000593026 DCAF8L1A6NGE4 600 aa19.12■□□□□ 0.65
DDX39A-221ENST00000593026 G2E3Q7L622 706 aa19.12■□□□□ 0.65
DDX39A-221ENST00000593026 RIC3Q7Z5B4 369 aa19.12■□□□□ 0.65
DDX39A-221ENST00000593026 ARFGEF2Q9Y6D5 1785 aa19.11■□□□□ 0.65
DDX39A-221ENST00000593026 SERPINB2P05120 415 aa19.11■□□□□ 0.65
DDX39A-221ENST00000593026 FLIIQ13045 1269 aa19.11■□□□□ 0.65
DDX39A-221ENST00000593026 HSP90AB3PQ58FF7 597 aa19.11■□□□□ 0.65
DDX39A-221ENST00000593026 YTHDC1Q96MU7 727 aaKnown RBP19.11■□□□□ 0.65
DDX39A-221ENST00000593026 FHDC1Q9C0D6 1143 aaPredicted RBP19.11■□□□□ 0.65
DDX39A-221ENST00000593026 AFDNP55196 1824 aaKnown RBP19.11■□□□□ 0.65
DDX39A-221ENST00000593026 NRXN2Q9P2S2 1712 aa19.11■□□□□ 0.65
DDX39A-221ENST00000593026 GPTP24298 496 aa19.1■□□□□ 0.65
DDX39A-221ENST00000593026 ANKRD36CQ5JPF3 1778 aa19.1■□□□□ 0.65
DDX39A-221ENST00000593026 C10orf71Q711Q0 1435 aa19.09■□□□□ 0.65
DDX39A-221ENST00000593026 NPHP1O15259 732 aa19.09■□□□□ 0.65
DDX39A-221ENST00000593026 ALDH1L2Q3SY69 923 aa19.09■□□□□ 0.65
DDX39A-221ENST00000593026 ZNF34Q8IZ26 560 aa19.09■□□□□ 0.65
DDX39A-221ENST00000593026 PI4KAP2A4QPH2 592 aa19.08■□□□□ 0.64
DDX39A-221ENST00000593026 FKBP5Q13451 457 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-221ENST00000593026 TCIRG1Q13488 830 aa19.08■□□□□ 0.64
DDX39A-221ENST00000593026 KSR2Q6VAB6 950 aa19.08■□□□□ 0.64
DDX39A-221ENST00000593026 NBPF5PQ86XG9 351 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-221ENST00000593026 PI4KAP1Q8N8J0 262 aa19.08■□□□□ 0.64
DDX39A-221ENST00000593026 CNBD1Q8NA66 436 aa19.08■□□□□ 0.64
DDX39A-221ENST00000593026 SSH1Q8WYL5 1049 aa19.08■□□□□ 0.64
DDX39A-221ENST00000593026 BCL2L13Q9BXK5 485 aa19.08■□□□□ 0.64
DDX39A-221ENST00000593026 CD2APQ9Y5K6 639 aa19.08■□□□□ 0.64
DDX39A-221ENST00000593026 KIF13BQ9NQT8 1826 aa19.07■□□□□ 0.64
DDX39A-221ENST00000593026 UBN2Q6ZU65 1347 aa19.07■□□□□ 0.64
DDX39A-221ENST00000593026 FAM177BA6PVY3 158 aa19.07■□□□□ 0.64
DDX39A-221ENST00000593026 PARP10Q53GL7 1025 aa19.07■□□□□ 0.64
DDX39A-221ENST00000593026 MRPL50Q8N5N7 158 aaKnown RBP19.07■□□□□ 0.64
DDX39A-221ENST00000593026 SMC4Q9NTJ3 1288 aa19.07■□□□□ 0.64
DDX39A-221ENST00000593026 MAP3K2Q9Y2U5 619 aa19.07■□□□□ 0.64
DDX39A-221ENST00000593026 ADCY9O60503 1353 aa19.06■□□□□ 0.64
DDX39A-221ENST00000593026 PRR5LQ6MZQ0 368 aa19.06■□□□□ 0.64
DDX39A-221ENST00000593026 SYT17Q9BSW7 474 aa19.06■□□□□ 0.64
DDX39A-221ENST00000593026 NYXQ9GZU5 481 aa19.06■□□□□ 0.64
DDX39A-221ENST00000593026 ST5P78524 1137 aa19.05■□□□□ 0.64
DDX39A-221ENST00000593026 TPTE2Q6XPS3 522 aa19.05■□□□□ 0.64
DDX39A-221ENST00000593026 PPP1R42Q7Z4L9 355 aa19.05■□□□□ 0.64
DDX39A-221ENST00000593026 MYD88Q99836 296 aa19.05■□□□□ 0.64
DDX39A-221ENST00000593026 METTL22Q9BUU2 404 aaPredicted RBP19.05■□□□□ 0.64
DDX39A-221ENST00000593026 IBTKQ9P2D0 1353 aaPredicted RBP19.05■□□□□ 0.64
DDX39A-221ENST00000593026 ATP5J2-PTCD1G3V325 749 aa19.04■□□□□ 0.64
DDX39A-221ENST00000593026 GTF2E1P29083 439 aaPredicted RBP19.04■□□□□ 0.64
DDX39A-221ENST00000593026 RARSP54136 660 aaKnown RBP19.04■□□□□ 0.64
DDX39A-221ENST00000593026 SUSD4Q5VX71 490 aa19.04■□□□□ 0.64
DDX39A-221ENST00000593026 NLRP10Q86W26 655 aa19.04■□□□□ 0.64
DDX39A-221ENST00000593026 ISCA1Q9BUE6 129 aa19.04■□□□□ 0.64
DDX39A-221ENST00000593026 NEXNQ0ZGT2 675 aa19.03■□□□□ 0.64
DDX39A-221ENST00000593026 CCDC24Q8N4L8 307 aa19.03■□□□□ 0.64
DDX39A-221ENST00000593026 NLGN2Q8NFZ4 835 aa19.03■□□□□ 0.64
DDX39A-221ENST00000593026 DNAAF4Q8WXU2 420 aa19.03■□□□□ 0.64
DDX39A-221ENST00000593026 NTSR2O95665 410 aa19.02■□□□□ 0.64
DDX39A-221ENST00000593026 TGFB2P61812 414 aa19.02■□□□□ 0.64
DDX39A-221ENST00000593026 TRIM28Q13263 835 aaKnown RBP19.02■□□□□ 0.64
DDX39A-221ENST00000593026 UTP14AQ9BVJ6 771 aaKnown RBP19.02■□□□□ 0.64
DDX39A-221ENST00000593026 PTPRCP08575 1304 aa19.01■□□□□ 0.63
DDX39A-221ENST00000593026 NUTM1Q86Y26 1132 aa19.01■□□□□ 0.63
DDX39A-221ENST00000593026 BRIP1Q9BX63 1249 aa19.01■□□□□ 0.63
DDX39A-221ENST00000593026 PXDNLA1KZ92 1463 aa19.01■□□□□ 0.63
DDX39A-221ENST00000593026 ANKRD31Q8N7Z5 1873 aa19.01■□□□□ 0.63
DDX39A-221ENST00000593026 RNF123Q5XPI4 1314 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms