RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 IFT57Q9NWB7 429 aa15.4■□□□□ 0.06
DDX39A-219ENST00000592927 VIRMAQ69YN4 1812 aaKnown RBP15.4■□□□□ 0.06
DDX39A-219ENST00000592927 CHL1O00533 1208 aa15.39■□□□□ 0.05
DDX39A-219ENST00000592927 KCNQ3O43525 872 aa15.39■□□□□ 0.05
DDX39A-219ENST00000592927 POTEIP0CG38 1075 aa15.39■□□□□ 0.05
DDX39A-219ENST00000592927 POTEJP0CG39 1038 aa15.39■□□□□ 0.05
DDX39A-219ENST00000592927 ADRA2BP18089 450 aa15.39■□□□□ 0.05
DDX39A-219ENST00000592927 GNAI1P63096 354 aa15.39■□□□□ 0.05
DDX39A-219ENST00000592927 DPY19L2Q6NUT2 758 aa15.39■□□□□ 0.05
DDX39A-219ENST00000592927 FMNL2Q96PY5 1086 aa15.39■□□□□ 0.05
DDX39A-219ENST00000592927 IL16Q14005 1332 aa15.39■□□□□ 0.05
DDX39A-219ENST00000592927 SIPA1L3O60292 1781 aaPredicted RBP15.39■□□□□ 0.05
DDX39A-219ENST00000592927 ZNF496Q96IT1 587 aaPredicted RBP15.38■□□□□ 0.05
DDX39A-219ENST00000592927 E9PSI1 815 aa15.37■□□□□ 0.05
DDX39A-219ENST00000592927 ZNF853P0CG23 659 aa15.37■□□□□ 0.05
DDX39A-219ENST00000592927 DDR1Q08345 913 aa15.37■□□□□ 0.05
DDX39A-219ENST00000592927 RPS6KA4O75676 772 aa15.36■□□□□ 0.05
DDX39A-219ENST00000592927 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
DDX39A-219ENST00000592927 RC3H1Q5TC82 1133 aaKnown RBP15.36■□□□□ 0.05
DDX39A-219ENST00000592927 VSIG10Q8N0Z9 540 aa15.36■□□□□ 0.05
DDX39A-219ENST00000592927 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
DDX39A-219ENST00000592927 MBIPQ9NS73 344 aa15.36■□□□□ 0.05
DDX39A-219ENST00000592927 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
DDX39A-219ENST00000592927 EIF4A1P60842 406 aaKnown RBP15.35■□□□□ 0.05
DDX39A-219ENST00000592927 FKBP8Q14318 412 aa15.35■□□□□ 0.05
DDX39A-219ENST00000592927 TRMT2AQ8IZ69 625 aaKnown RBP15.35■□□□□ 0.05
DDX39A-219ENST00000592927 SRP68Q9UHB9 627 aaKnown RBP15.35■□□□□ 0.05
DDX39A-219ENST00000592927 SBF1O95248 1867 aa15.35■□□□□ 0.05
DDX39A-219ENST00000592927 SNRPA1P09661 255 aaKnown RBP15.34■□□□□ 0.05
DDX39A-219ENST00000592927 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
DDX39A-219ENST00000592927 CDCA7LQ96GN5 454 aa15.34■□□□□ 0.05
DDX39A-219ENST00000592927 TEX13AQ9BXU3 409 aaPredicted RBP15.34■□□□□ 0.05
DDX39A-219ENST00000592927 MYH16Q9H6N6 1097 aa15.34■□□□□ 0.05
DDX39A-219ENST00000592927 PASKQ96RG2 1323 aa15.34■□□□□ 0.05
DDX39A-219ENST00000592927 TMEM88BA6NKF7 163 aa15.33■□□□□ 0.04
DDX39A-219ENST00000592927 TSR2Q969E8 191 aaKnown RBP15.33■□□□□ 0.04
DDX39A-219ENST00000592927 NFKBIEO00221 500 aa15.32■□□□□ 0.04
DDX39A-219ENST00000592927 STARD3NLO95772 234 aa15.32■□□□□ 0.04
DDX39A-219ENST00000592927 MAP2K1Q02750 393 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-219ENST00000592927 DUSP27Q5VZP5 1158 aa15.32■□□□□ 0.04
DDX39A-219ENST00000592927 SPINK5Q9NQ38 1064 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-219ENST00000592927 KDM3BQ7LBC6 1761 aa15.31■□□□□ 0.04
DDX39A-219ENST00000592927 UBR2Q8IWV8 1755 aa15.31■□□□□ 0.04
DDX39A-219ENST00000592927 POLRMTO00411 1230 aaKnown RBP15.31■□□□□ 0.04
DDX39A-219ENST00000592927 CNTNAP4Q9C0A0 1308 aa15.31■□□□□ 0.04
DDX39A-219ENST00000592927 FANCIQ9NVI1 1328 aa15.31■□□□□ 0.04
DDX39A-219ENST00000592927 PRAMEF22A3QJZ6 481 aa15.3■□□□□ 0.04
DDX39A-219ENST00000592927 CYP19A1P11511 503 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-219ENST00000592927 DEFB115Q30KQ5 88 aa15.3■□□□□ 0.04
DDX39A-219ENST00000592927 ERFEQ4G0M1 354 aa15.3■□□□□ 0.04
DDX39A-219ENST00000592927 TTLL6Q8N841 843 aa15.3■□□□□ 0.04
DDX39A-219ENST00000592927 ZNF831Q5JPB2 1677 aa15.29■□□□□ 0.04
DDX39A-219ENST00000592927 USP42Q9H9J4 1324 aaKnown RBP15.29■□□□□ 0.04
DDX39A-219ENST00000592927 DDNO94850 711 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-219ENST00000592927 TM4SF1P30408 202 aa15.29■□□□□ 0.04
DDX39A-219ENST00000592927 KRT24Q2M2I5 525 aa15.29■□□□□ 0.04
DDX39A-219ENST00000592927 USP16Q9Y5T5 823 aa15.29■□□□□ 0.04
DDX39A-219ENST00000592927 WDR33Q9C0J8 1336 aaKnown RBP15.28■□□□□ 0.04
DDX39A-219ENST00000592927 RASSF10A6NK89 507 aa15.28■□□□□ 0.04
DDX39A-219ENST00000592927 ITGBL1O95965 494 aaPredicted RBP15.28■□□□□ 0.04
DDX39A-219ENST00000592927 CRKLP46109 303 aaKnown RBP15.28■□□□□ 0.04
DDX39A-219ENST00000592927 LDHDQ86WU2 507 aa15.28■□□□□ 0.04
DDX39A-219ENST00000592927 C8orf58Q8NAV2 365 aa15.28■□□□□ 0.04
DDX39A-219ENST00000592927 ELL2O00472 640 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-219ENST00000592927 HOXB7P09629 217 aa15.27■□□□□ 0.04
DDX39A-219ENST00000592927 EIF2S2P20042 333 aaKnown RBP15.27■□□□□ 0.04
DDX39A-219ENST00000592927 TJP1Q07157 1748 aa15.26■□□□□ 0.03
DDX39A-219ENST00000592927 SOS1Q07889 1333 aaPredicted RBP15.26■□□□□ 0.03
DDX39A-219ENST00000592927 NEFLP07196 543 aa15.26■□□□□ 0.03
DDX39A-219ENST00000592927 EXOSC9Q06265 439 aaKnown RBP15.26■□□□□ 0.03
DDX39A-219ENST00000592927 INTS5Q6P9B9 1019 aaKnown RBP15.26■□□□□ 0.03
DDX39A-219ENST00000592927 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
DDX39A-219ENST00000592927 SUPT16HQ9Y5B9 1047 aaKnown RBP15.26■□□□□ 0.03
DDX39A-219ENST00000592927 RNF123Q5XPI4 1314 aa15.25■□□□□ 0.03
DDX39A-219ENST00000592927 A1BGP04217 495 aa15.25■□□□□ 0.03
DDX39A-219ENST00000592927 CT47B1P0C2W7 299 aaPredicted RBP15.25■□□□□ 0.03
DDX39A-219ENST00000592927 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
DDX39A-219ENST00000592927 TWISTNBQ3B726 338 aaPredicted RBP15.25■□□□□ 0.03
DDX39A-219ENST00000592927 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
DDX39A-219ENST00000592927 BEGAINQ9BUH8 593 aa15.25■□□□□ 0.03
DDX39A-219ENST00000592927 CHMP4AQ9BY43 222 aa15.25■□□□□ 0.03
DDX39A-219ENST00000592927 ZBTB1Q9Y2K1 713 aa15.25■□□□□ 0.03
DDX39A-219ENST00000592927 TIAM2Q8IVF5 1701 aa15.24■□□□□ 0.03
DDX39A-219ENST00000592927 C2CD5Q86YS7 1000 aa15.24■□□□□ 0.03
DDX39A-219ENST00000592927 TSPYL6Q8N831 410 aa15.24■□□□□ 0.03
DDX39A-219ENST00000592927 NECTIN2Q92692 538 aa15.24■□□□□ 0.03
DDX39A-219ENST00000592927 MCOLN1Q9GZU1 580 aa15.24■□□□□ 0.03
DDX39A-219ENST00000592927 TAF1DQ9H5J8 278 aaPredicted RBP15.24■□□□□ 0.03
DDX39A-219ENST00000592927 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
DDX39A-219ENST00000592927 GTF3C3Q9Y5Q9 886 aa15.24■□□□□ 0.03
DDX39A-219ENST00000592927 COL5A3P25940 1745 aaPredicted RBP15.23■□□□□ 0.03
DDX39A-219ENST00000592927 IQCA1LA6NCM1 817 aa15.23■□□□□ 0.03
DDX39A-219ENST00000592927 H0YIN7 160 aa15.23■□□□□ 0.03
DDX39A-219ENST00000592927 EAPPQ56P03 285 aaPredicted RBP15.23■□□□□ 0.03
DDX39A-219ENST00000592927 NPM2Q86SE8 214 aaKnown RBP15.23■□□□□ 0.03
DDX39A-219ENST00000592927 CLEC11AQ9Y240 323 aa15.23■□□□□ 0.03
DDX39A-219ENST00000592927 ERBB4Q15303 1308 aa15.22■□□□□ 0.03
DDX39A-219ENST00000592927 IL6STP40189 918 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-219ENST00000592927 PIP4K2AP48426 406 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-219ENST00000592927 USPL1Q5W0Q7 1092 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms