RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ZNF526Q8TF50 670 aaPredicted RBP18.2■□□□□ 0.5
APOC1-208ENST00000592535 BRIP1Q9BX63 1249 aa18.2■□□□□ 0.5
APOC1-208ENST00000592535 NPHP1O15259 732 aa18.19■□□□□ 0.5
APOC1-208ENST00000592535 MYL6BP14649 208 aa18.19■□□□□ 0.5
APOC1-208ENST00000592535 HLFQ16534 295 aa18.19■□□□□ 0.5
APOC1-208ENST00000592535 RGL2O15211 777 aa18.18■□□□□ 0.5
APOC1-208ENST00000592535 PDE6BP35913 854 aa18.18■□□□□ 0.5
APOC1-208ENST00000592535 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
APOC1-208ENST00000592535 TTLL7Q6ZT98 887 aa18.18■□□□□ 0.5
APOC1-208ENST00000592535 TTLL6Q8N841 843 aa18.18■□□□□ 0.5
APOC1-208ENST00000592535 NIP7Q9Y221 180 aaKnown RBP eCLIP18.18■□□□□ 0.5
APOC1-208ENST00000592535 CHL1O00533 1208 aa18.17■□□□□ 0.5
APOC1-208ENST00000592535 EIF2S2P20042 333 aaKnown RBP18.17■□□□□ 0.5
APOC1-208ENST00000592535 ST5P78524 1137 aa18.17■□□□□ 0.5
APOC1-208ENST00000592535 NBPF5PQ86XG9 351 aaPredicted RBP18.17■□□□□ 0.5
APOC1-208ENST00000592535 GPBP1L1Q9HC44 474 aaPredicted RBP18.17■□□□□ 0.5
APOC1-208ENST00000592535 LAS1LQ9Y4W2 734 aaKnown RBP18.17■□□□□ 0.5
APOC1-208ENST00000592535 ERBB4Q15303 1308 aa18.17■□□□□ 0.5
APOC1-208ENST00000592535 CCDC88AQ3V6T2 1871 aa18.16■□□□□ 0.5
APOC1-208ENST00000592535 C1QTNF8P60827 252 aa18.16■□□□□ 0.5
APOC1-208ENST00000592535 C9orf131Q5VYM1 1079 aa18.16■□□□□ 0.5
APOC1-208ENST00000592535 ZNF622Q969S3 477 aaKnown RBP eCLIP18.16■□□□□ 0.5
APOC1-208ENST00000592535 PDZRN3Q9UPQ7 1066 aa18.16■□□□□ 0.5
APOC1-208ENST00000592535 ARFGEF2Q9Y6D5 1785 aa18.16■□□□□ 0.5
APOC1-208ENST00000592535 MAP3K15Q6ZN16 1313 aa18.16■□□□□ 0.5
APOC1-208ENST00000592535 FAM177BA6PVY3 158 aa18.15■□□□□ 0.5
APOC1-208ENST00000592535 ERVV-1B6SEH8 477 aa18.15■□□□□ 0.5
APOC1-208ENST00000592535 APAF1O14727 1248 aa18.15■□□□□ 0.5
APOC1-208ENST00000592535 PDIA6Q15084 440 aa18.15■□□□□ 0.5
APOC1-208ENST00000592535 KRT24Q2M2I5 525 aa18.15■□□□□ 0.5
APOC1-208ENST00000592535 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
APOC1-208ENST00000592535 SLX4Q8IY92 1834 aa18.14■□□□□ 0.5
APOC1-208ENST00000592535 RASSF7Q02833 373 aa18.14■□□□□ 0.49
APOC1-208ENST00000592535 LRP10Q7Z4F1 713 aa18.14■□□□□ 0.49
APOC1-208ENST00000592535 ZBTB3Q9H5J0 574 aa18.14■□□□□ 0.49
APOC1-208ENST00000592535 ANXA1P04083 346 aa18.13■□□□□ 0.49
APOC1-208ENST00000592535 PROSER3Q2NL68 480 aa18.13■□□□□ 0.49
APOC1-208ENST00000592535 TPTE2Q6XPS3 522 aa18.13■□□□□ 0.49
APOC1-208ENST00000592535 NECTIN2Q92692 538 aa18.13■□□□□ 0.49
APOC1-208ENST00000592535 TNRC6CQ9HCJ0 1690 aaKnown RBP18.12■□□□□ 0.49
APOC1-208ENST00000592535 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
APOC1-208ENST00000592535 SRGNP10124 158 aa18.12■□□□□ 0.49
APOC1-208ENST00000592535 RNF181Q9P0P0 153 aa18.12■□□□□ 0.49
APOC1-208ENST00000592535 GPTP24298 496 aa18.11■□□□□ 0.49
APOC1-208ENST00000592535 STYK1Q6J9G0 422 aa18.11■□□□□ 0.49
APOC1-208ENST00000592535 CFAP44Q96MT7 982 aa18.11■□□□□ 0.49
APOC1-208ENST00000592535 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
APOC1-208ENST00000592535 ANKRD36CQ5JPF3 1778 aa18.11■□□□□ 0.49
APOC1-208ENST00000592535 UBN2Q6ZU65 1347 aa18.1■□□□□ 0.49
APOC1-208ENST00000592535 C21orf2O43822 256 aa18.1■□□□□ 0.49
APOC1-208ENST00000592535 PRELPP51888 382 aa18.1■□□□□ 0.49
APOC1-208ENST00000592535 GIGYF2Q6Y7W6 1299 aaKnown RBP18.1■□□□□ 0.49
APOC1-208ENST00000592535 MASTLQ96GX5 879 aa18.1■□□□□ 0.49
APOC1-208ENST00000592535 TIAM2Q8IVF5 1701 aa18.09■□□□□ 0.49
APOC1-208ENST00000592535 ABCC12Q96J65 1359 aa18.09■□□□□ 0.49
APOC1-208ENST00000592535 NFKBIEO00221 500 aa18.09■□□□□ 0.49
APOC1-208ENST00000592535 ANP32CO43423 234 aa18.09■□□□□ 0.49
APOC1-208ENST00000592535 ZNF853P0CG23 659 aa18.09■□□□□ 0.49
APOC1-208ENST00000592535 GTF2E1P29083 439 aaPredicted RBP18.09■□□□□ 0.49
APOC1-208ENST00000592535 CNKSR1Q969H4 720 aa18.09■□□□□ 0.49
APOC1-208ENST00000592535 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
APOC1-208ENST00000592535 KLRG2A4D1S0 409 aaPredicted RBP18.08■□□□□ 0.48
APOC1-208ENST00000592535 KIF3CO14782 793 aa18.08■□□□□ 0.48
APOC1-208ENST00000592535 PRPF40BQ6NWY9 871 aaKnown RBP18.08■□□□□ 0.48
APOC1-208ENST00000592535 NUTM1Q86Y26 1132 aa18.08■□□□□ 0.48
APOC1-208ENST00000592535 ZNF34Q8IZ26 560 aa18.08■□□□□ 0.48
APOC1-208ENST00000592535 NYXQ9GZU5 481 aa18.08■□□□□ 0.48
APOC1-208ENST00000592535 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
APOC1-208ENST00000592535 DICER1Q9UPY3 1922 aaKnown RBP18.08■□□□□ 0.48
APOC1-208ENST00000592535 IBTKQ9P2D0 1353 aaPredicted RBP18.07■□□□□ 0.48
APOC1-208ENST00000592535 LMNB1P20700 586 aa18.07■□□□□ 0.48
APOC1-208ENST00000592535 AIMP1Q12904 312 aaKnown RBP18.07■□□□□ 0.48
APOC1-208ENST00000592535 ERFEQ4G0M1 354 aa18.07■□□□□ 0.48
APOC1-208ENST00000592535 SUSD4Q5VX71 490 aa18.07■□□□□ 0.48
APOC1-208ENST00000592535 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
APOC1-208ENST00000592535 XAGE3Q8WTP9 111 aa18.07■□□□□ 0.48
APOC1-208ENST00000592535 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
APOC1-208ENST00000592535 IFT57Q9NWB7 429 aa18.07■□□□□ 0.48
APOC1-208ENST00000592535 CHPF2Q9P2E5 772 aa18.07■□□□□ 0.48
APOC1-208ENST00000592535 SENP3-EIF4A1A0A087X0R7 540 aa18.06■□□□□ 0.48
APOC1-208ENST00000592535 HOXB7P09629 217 aa18.06■□□□□ 0.48
APOC1-208ENST00000592535 NPR1P16066 1061 aa18.06■□□□□ 0.48
APOC1-208ENST00000592535 HDGFL1Q5TGJ6 251 aa18.06■□□□□ 0.48
APOC1-208ENST00000592535 DUSP27Q5VZP5 1158 aa18.06■□□□□ 0.48
APOC1-208ENST00000592535 NMRK2Q9NPI5 230 aa18.06■□□□□ 0.48
APOC1-208ENST00000592535 NTSR2O95665 410 aa18.05■□□□□ 0.48
APOC1-208ENST00000592535 GNAI1P63096 354 aa18.05■□□□□ 0.48
APOC1-208ENST00000592535 CALD1Q05682 793 aaKnown RBP18.05■□□□□ 0.48
APOC1-208ENST00000592535 RIC1Q4ADV7 1423 aa18.04■□□□□ 0.48
APOC1-208ENST00000592535 PARP10Q53GL7 1025 aa18.03■□□□□ 0.48
APOC1-208ENST00000592535 C7orf43Q8WVR3 580 aa18.03■□□□□ 0.48
APOC1-208ENST00000592535 LTBP3Q9NS15 1303 aa18.02■□□□□ 0.48
APOC1-208ENST00000592535 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
APOC1-208ENST00000592535 CRY2Q49AN0 593 aa18.02■□□□□ 0.48
APOC1-208ENST00000592535 PPP1R42Q7Z4L9 355 aa18.02■□□□□ 0.48
APOC1-208ENST00000592535 TAOK3Q9H2K8 898 aa18.02■□□□□ 0.48
APOC1-208ENST00000592535 DBF4Q9UBU7 674 aaPredicted RBP18.02■□□□□ 0.48
APOC1-208ENST00000592535 LAMB2P55268 1798 aa18.02■□□□□ 0.47
APOC1-208ENST00000592535 KDM2BQ8NHM5 1336 aa18.01■□□□□ 0.47
APOC1-208ENST00000592535 ELL2O00472 640 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 1798 ms