RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 RRAGCQ9HB90 399 aa24.28■■□□□ 1.48
CIRBP-237ENST00000592234 MAPK8IP3Q9UPT6 1336 aa24.28■■□□□ 1.48
CIRBP-237ENST00000592234 NBPF26B4DH59 902 aa24.27■■□□□ 1.48
CIRBP-237ENST00000592234 NFE2L2Q16236 605 aa24.27■■□□□ 1.48
CIRBP-237ENST00000592234 NBPF10Q6P3W6 841 aaKnown RBP24.27■■□□□ 1.48
CIRBP-237ENST00000592234 NBPF15Q8N660 670 aa24.27■■□□□ 1.48
CIRBP-237ENST00000592234 RBM46Q8TBY0 533 aaKnown RBP24.27■■□□□ 1.48
CIRBP-237ENST00000592234 ZNF219Q9P2Y4 722 aaPredicted RBP24.27■■□□□ 1.48
CIRBP-237ENST00000592234 DICER1Q9UPY3 1922 aaKnown RBP24.27■■□□□ 1.48
CIRBP-237ENST00000592234 ARFGEF2Q9Y6D5 1785 aa24.26■■□□□ 1.47
CIRBP-237ENST00000592234 NFKBIEO00221 500 aa24.26■■□□□ 1.47
CIRBP-237ENST00000592234 C21orf2O43822 256 aa24.26■■□□□ 1.47
CIRBP-237ENST00000592234 APLP1P51693 650 aa24.26■■□□□ 1.47
CIRBP-237ENST00000592234 PRELPP51888 382 aa24.26■■□□□ 1.47
CIRBP-237ENST00000592234 NBPF5PQ86XG9 351 aaPredicted RBP24.26■■□□□ 1.47
CIRBP-237ENST00000592234 SLX4Q8IY92 1834 aa24.26■■□□□ 1.47
CIRBP-237ENST00000592234 CNKSR1Q969H4 720 aa24.24■■□□□ 1.47
CIRBP-237ENST00000592234 NIP7Q9Y221 180 aaKnown RBP eCLIP24.24■■□□□ 1.47
CIRBP-237ENST00000592234 SRGNP10124 158 aa24.23■■□□□ 1.47
CIRBP-237ENST00000592234 RALBP1Q15311 655 aa24.23■■□□□ 1.47
CIRBP-237ENST00000592234 STYK1Q6J9G0 422 aa24.23■■□□□ 1.47
CIRBP-237ENST00000592234 MASTLQ96GX5 879 aa24.23■■□□□ 1.47
CIRBP-237ENST00000592234 THUMPD2Q9BTF0 503 aaKnown RBP24.23■■□□□ 1.47
CIRBP-237ENST00000592234 NUP98P52948 1817 aa24.22■■□□□ 1.47
CIRBP-237ENST00000592234 RGL2O15211 777 aa24.22■■□□□ 1.47
CIRBP-237ENST00000592234 WDR90Q96KV7 1748 aa24.21■■□□□ 1.47
CIRBP-237ENST00000592234 GLTPD2A6NH11 291 aa24.21■■□□□ 1.47
CIRBP-237ENST00000592234 EIF4A1P60842 406 aaKnown RBP24.21■■□□□ 1.47
CIRBP-237ENST00000592234 TPTE2Q6XPS3 522 aa24.21■■□□□ 1.47
CIRBP-237ENST00000592234 FSTL1Q12841 308 aa24.2■■□□□ 1.46
CIRBP-237ENST00000592234 DDX10Q13206 875 aaKnown RBP24.2■■□□□ 1.46
CIRBP-237ENST00000592234 PRPF40BQ6NWY9 871 aaKnown RBP24.2■■□□□ 1.46
CIRBP-237ENST00000592234 NGEFQ8N5V2 710 aa24.2■■□□□ 1.46
CIRBP-237ENST00000592234 FAM177BA6PVY3 158 aa24.19■■□□□ 1.46
CIRBP-237ENST00000592234 HLFQ16534 295 aa24.19■■□□□ 1.46
CIRBP-237ENST00000592234 SOGA3Q5TF21 947 aa24.18■■□□□ 1.46
CIRBP-237ENST00000592234 TAOK3Q9H2K8 898 aa24.18■■□□□ 1.46
CIRBP-237ENST00000592234 RRP7AQ9Y3A4 280 aaKnown RBP24.18■■□□□ 1.46
CIRBP-237ENST00000592234 ERFEQ4G0M1 354 aa24.17■■□□□ 1.46
CIRBP-237ENST00000592234 LTBP3Q9NS15 1303 aa24.16■■□□□ 1.46
CIRBP-237ENST00000592234 VEGFAP15692 232 aaPredicted RBP24.16■■□□□ 1.46
CIRBP-237ENST00000592234 NPR1P16066 1061 aa24.16■■□□□ 1.46
CIRBP-237ENST00000592234 GTF2E1P29083 439 aaPredicted RBP24.16■■□□□ 1.46
CIRBP-237ENST00000592234 DPY19L2Q6NUT2 758 aa24.16■■□□□ 1.46
CIRBP-237ENST00000592234 MYL6BP14649 208 aa24.15■■□□□ 1.46
CIRBP-237ENST00000592234 RIPK4P57078 832 aa24.15■■□□□ 1.46
CIRBP-237ENST00000592234 KIF6Q6ZMV9 814 aa24.15■■□□□ 1.46
CIRBP-237ENST00000592234 SMC1BQ8NDV3 1235 aa24.15■■□□□ 1.46
CIRBP-237ENST00000592234 TSPYL4Q9UJ04 414 aa24.15■■□□□ 1.46
CIRBP-237ENST00000592234 ERVV-1B6SEH8 477 aa24.14■■□□□ 1.45
CIRBP-237ENST00000592234 MAP3K15Q6ZN16 1313 aa24.13■■□□□ 1.45
CIRBP-237ENST00000592234 KLRG2A4D1S0 409 aaPredicted RBP24.13■■□□□ 1.45
CIRBP-237ENST00000592234 MYBBP1AQ9BQG0 1328 aaKnown RBP24.12■■□□□ 1.45
CIRBP-237ENST00000592234 CCDC93Q567U6 631 aa24.12■■□□□ 1.45
CIRBP-237ENST00000592234 TTLL7Q6ZT98 887 aa24.12■■□□□ 1.45
CIRBP-237ENST00000592234 NYXQ9GZU5 481 aa24.12■■□□□ 1.45
CIRBP-237ENST00000592234 LMOD3Q0VAK6 560 aa24.11■■□□□ 1.45
CIRBP-237ENST00000592234 DNAJC5GQ8N7S2 189 aa24.11■■□□□ 1.45
CIRBP-237ENST00000592234 ERBB4Q15303 1308 aa24.1■■□□□ 1.45
CIRBP-237ENST00000592234 TMPOP42166 694 aaKnown RBP24.1■■□□□ 1.45
CIRBP-237ENST00000592234 C7orf43Q8WVR3 580 aa24.1■■□□□ 1.45
CIRBP-237ENST00000592234 ZBTB3Q9H5J0 574 aa24.1■■□□□ 1.45
CIRBP-237ENST00000592234 HTRA3P83110 453 aa24.09■■□□□ 1.45
CIRBP-237ENST00000592234 NUTM1Q86Y26 1132 aa24.09■■□□□ 1.45
CIRBP-237ENST00000592234 POTECB2RU33 542 aa24.08■■□□□ 1.45
CIRBP-237ENST00000592234 GPTP24298 496 aa24.08■■□□□ 1.45
CIRBP-237ENST00000592234 ALDH1B1P30837 517 aa24.08■■□□□ 1.45
CIRBP-237ENST00000592234 BABAM1Q9NWV8 329 aa24.08■■□□□ 1.45
CIRBP-237ENST00000592234 ABCC12Q96J65 1359 aa24.07■■□□□ 1.44
CIRBP-237ENST00000592234 EIF2S2P20042 333 aaKnown RBP24.07■■□□□ 1.44
CIRBP-237ENST00000592234 CCDC146Q8IYE0 955 aa24.07■■□□□ 1.44
CIRBP-237ENST00000592234 ZEB1P37275 1124 aaPredicted RBP24.06■■□□□ 1.44
CIRBP-237ENST00000592234 NEUROD2Q15784 382 aa24.06■■□□□ 1.44
CIRBP-237ENST00000592234 UBN2Q6ZU65 1347 aa24.06■■□□□ 1.44
CIRBP-237ENST00000592234 DDNO94850 711 aaPredicted RBP24.05■■□□□ 1.44
CIRBP-237ENST00000592234 FKBP4Q02790 459 aaKnown RBP eCLIP24.05■■□□□ 1.44
CIRBP-237ENST00000592234 OLFM4Q6UX06 510 aa24.05■■□□□ 1.44
CIRBP-237ENST00000592234 GIGYF2Q6Y7W6 1299 aaKnown RBP24.05■■□□□ 1.44
CIRBP-237ENST00000592234 RTKN2Q8IZC4 609 aa24.05■■□□□ 1.44
CIRBP-237ENST00000592234 IBTKQ9P2D0 1353 aaPredicted RBP24.04■■□□□ 1.44
CIRBP-237ENST00000592234 WDR43Q15061 677 aaKnown RBP eCLIP24.04■■□□□ 1.44
CIRBP-237ENST00000592234 CRY2Q49AN0 593 aa24.04■■□□□ 1.44
CIRBP-237ENST00000592234 KLRG1Q96E93 195 aa24.04■■□□□ 1.44
CIRBP-237ENST00000592234 SUSD4Q5VX71 490 aa24.03■■□□□ 1.44
CIRBP-237ENST00000592234 ZNF34Q8IZ26 560 aa24.03■■□□□ 1.44
CIRBP-237ENST00000592234 ZNF277Q9NRM2 450 aaPredicted RBP24.03■■□□□ 1.44
CIRBP-237ENST00000592234 RIC1Q4ADV7 1423 aa24.02■■□□□ 1.44
CIRBP-237ENST00000592234 PDIA6Q15084 440 aa24.02■■□□□ 1.44
CIRBP-237ENST00000592234 RPGRQ92834 1020 aaKnown RBP24.02■■□□□ 1.44
CIRBP-237ENST00000592234 RUNDC1Q96C34 613 aa24.02■■□□□ 1.44
CIRBP-237ENST00000592234 SCN4AP35499 1836 aa24.02■■□□□ 1.44
CIRBP-237ENST00000592234 ANKRD36CQ5JPF3 1778 aa24.01■■□□□ 1.43
CIRBP-237ENST00000592234 ANXA1P04083 346 aa24.01■■□□□ 1.43
CIRBP-237ENST00000592234 LRP10Q7Z4F1 713 aa24.01■■□□□ 1.43
CIRBP-237ENST00000592234 PPP1R42Q7Z4L9 355 aa24.01■■□□□ 1.43
CIRBP-237ENST00000592234 NTSR2O95665 410 aa24■■□□□ 1.43
CIRBP-237ENST00000592234 PROSER3Q2NL68 480 aa24■■□□□ 1.43
CIRBP-237ENST00000592234 PARP10Q53GL7 1025 aa24■■□□□ 1.43
CIRBP-237ENST00000592234 NECTIN2Q92692 538 aa24■■□□□ 1.43
CIRBP-237ENST00000592234 IFFO2Q5TF58 517 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms