RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
SMAD4-214ENST00000592186 C4BP0C0L5 1744 aa13.57□□□□□ -0.24
SMAD4-214ENST00000592186 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
SMAD4-214ENST00000592186 CLEC4GQ6UXB4 293 aa13.57□□□□□ -0.24
SMAD4-214ENST00000592186 ATF7IPQ6VMQ6 1270 aa13.57□□□□□ -0.24
SMAD4-214ENST00000592186 G2E3Q7L622 706 aa13.57□□□□□ -0.24
SMAD4-214ENST00000592186 RIC3Q7Z5B4 369 aa13.57□□□□□ -0.24
SMAD4-214ENST00000592186 NARFQ9UHQ1 456 aa13.57□□□□□ -0.24
SMAD4-214ENST00000592186 ZNF652Q9Y2D9 606 aa13.57□□□□□ -0.24
SMAD4-214ENST00000592186 COL5A3P25940 1745 aaPredicted RBP13.56□□□□□ -0.24
SMAD4-214ENST00000592186 COL15A1P39059 1388 aa13.56□□□□□ -0.24
SMAD4-214ENST00000592186 PI4KAP2A4QPH2 592 aa13.56□□□□□ -0.24
SMAD4-214ENST00000592186 HSP90AB3PQ58FF7 597 aa13.56□□□□□ -0.24
SMAD4-214ENST00000592186 PI4KAP1Q8N8J0 262 aa13.56□□□□□ -0.24
SMAD4-214ENST00000592186 TBC1D2BQ9UPU7 963 aa13.56□□□□□ -0.24
SMAD4-214ENST00000592186 MAP3K15Q6ZN16 1313 aa13.56□□□□□ -0.24
SMAD4-214ENST00000592186 SOCS7O14512 581 aa13.55□□□□□ -0.24
SMAD4-214ENST00000592186 PHF14O94880 888 aa13.55□□□□□ -0.24
SMAD4-214ENST00000592186 NEXNQ0ZGT2 675 aa13.55□□□□□ -0.24
SMAD4-214ENST00000592186 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
SMAD4-214ENST00000592186 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
SMAD4-214ENST00000592186 RREB1Q92766 1687 aa13.54□□□□□ -0.24
SMAD4-214ENST00000592186 TAF1LQ8IZX4 1826 aa13.54□□□□□ -0.24
SMAD4-214ENST00000592186 GIGYF2Q6Y7W6 1299 aaKnown RBP13.54□□□□□ -0.24
SMAD4-214ENST00000592186 SLC16A10Q8TF71 515 aa13.54□□□□□ -0.24
SMAD4-214ENST00000592186 DNAAF4Q8WXU2 420 aa13.54□□□□□ -0.24
SMAD4-214ENST00000592186 MAP3K2Q9Y2U5 619 aa13.54□□□□□ -0.24
SMAD4-214ENST00000592186 SUPT16HQ9Y5B9 1047 aaKnown RBP13.54□□□□□ -0.24
SMAD4-214ENST00000592186 CACNA1FO60840 1977 aa13.53□□□□□ -0.24
SMAD4-214ENST00000592186 CAMTA2O94983 1202 aa13.53□□□□□ -0.24
SMAD4-214ENST00000592186 TCIRG1Q13488 830 aa13.53□□□□□ -0.24
SMAD4-214ENST00000592186 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
SMAD4-214ENST00000592186 DZIP1LQ8IYY4 767 aaKnown RBP13.53□□□□□ -0.24
SMAD4-214ENST00000592186 NLGN1Q8N2Q7 840 aa13.53□□□□□ -0.24
SMAD4-214ENST00000592186 METTL22Q9BUU2 404 aaPredicted RBP13.53□□□□□ -0.24
SMAD4-214ENST00000592186 ZBTB3Q9H5J0 574 aa13.53□□□□□ -0.24
SMAD4-214ENST00000592186 ANO8Q9HCE9 1232 aaPredicted RBP13.53□□□□□ -0.24
SMAD4-214ENST00000592186 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
SMAD4-214ENST00000592186 TRIM27P14373 513 aa13.52□□□□□ -0.25
SMAD4-214ENST00000592186 CCT4P50991 539 aaKnown RBP13.52□□□□□ -0.25
SMAD4-214ENST00000592186 RRP1P56182 461 aaKnown RBP13.52□□□□□ -0.25
SMAD4-214ENST00000592186 TRIM28Q13263 835 aaKnown RBP13.52□□□□□ -0.25
SMAD4-214ENST00000592186 USPL1Q5W0Q7 1092 aa13.52□□□□□ -0.25
SMAD4-214ENST00000592186 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.25
SMAD4-214ENST00000592186 FTSJ3Q8IY81 847 aaKnown RBP13.52□□□□□ -0.25
SMAD4-214ENST00000592186 PNPLA7Q6ZV29 1317 aa13.52□□□□□ -0.25
SMAD4-214ENST00000592186 USP42Q9H9J4 1324 aaKnown RBP13.52□□□□□ -0.25
SMAD4-214ENST00000592186 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
SMAD4-214ENST00000592186 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
SMAD4-214ENST00000592186 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
SMAD4-214ENST00000592186 LINS1Q8NG48 757 aa13.51□□□□□ -0.25
SMAD4-214ENST00000592186 CHMP4BQ9H444 224 aaKnown RBP13.51□□□□□ -0.25
SMAD4-214ENST00000592186 ADCY9O60503 1353 aa13.51□□□□□ -0.25
SMAD4-214ENST00000592186 F6X3S4 739 aa13.5□□□□□ -0.25
SMAD4-214ENST00000592186 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
SMAD4-214ENST00000592186 SMIM5Q71RC9 77 aa13.5□□□□□ -0.25
SMAD4-214ENST00000592186 SRCIN1Q9C0H9 1055 aa13.5□□□□□ -0.25
SMAD4-214ENST00000592186 NUP188Q5SRE5 1749 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 IBTKQ9P2D0 1353 aaPredicted RBP13.49□□□□□ -0.25
SMAD4-214ENST00000592186 ABCC4O15439 1325 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 PLIN1O60240 522 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 GYS1P13807 737 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 HLFQ16534 295 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 PARP10Q53GL7 1025 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 BEND3Q5T5X7 828 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 ZNF34Q8IZ26 560 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 CCDC191Q8NCU4 936 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 SETDB2Q96T68 719 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 MYD88Q99836 296 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 SRP68Q9UHB9 627 aaKnown RBP13.49□□□□□ -0.25
SMAD4-214ENST00000592186 HDAC5Q9UQL6 1122 aa13.49□□□□□ -0.25
SMAD4-214ENST00000592186 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
SMAD4-214ENST00000592186 CLUAP1Q96AJ1 413 aa13.48□□□□□ -0.25
SMAD4-214ENST00000592186 ISCA1Q9BUE6 129 aa13.48□□□□□ -0.25
SMAD4-214ENST00000592186 NIP7Q9Y221 180 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMAD4-214ENST00000592186 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
SMAD4-214ENST00000592186 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
SMAD4-214ENST00000592186 HSP90B1P14625 803 aaKnown RBP13.47□□□□□ -0.25
SMAD4-214ENST00000592186 TM4SF1P30408 202 aa13.47□□□□□ -0.25
SMAD4-214ENST00000592186 FKBP8Q14318 412 aa13.47□□□□□ -0.25
SMAD4-214ENST00000592186 PPP1R42Q7Z4L9 355 aa13.47□□□□□ -0.25
SMAD4-214ENST00000592186 BCL2L12Q9HB09 334 aa13.47□□□□□ -0.25
SMAD4-214ENST00000592186 CWC25Q9NXE8 425 aaPredicted RBP13.47□□□□□ -0.25
SMAD4-214ENST00000592186 PXDNLA1KZ92 1463 aa13.47□□□□□ -0.25
SMAD4-214ENST00000592186 NEURL1BA8MQ27 555 aa13.46□□□□□ -0.25
SMAD4-214ENST00000592186 ATP5J2-PTCD1G3V325 749 aa13.46□□□□□ -0.25
SMAD4-214ENST00000592186 IGKV5-2P06315 115 aa13.46□□□□□ -0.25
SMAD4-214ENST00000592186 GCKRQ14397 625 aa13.46□□□□□ -0.25
SMAD4-214ENST00000592186 TPTE2Q6XPS3 522 aa13.46□□□□□ -0.25
SMAD4-214ENST00000592186 NYXQ9GZU5 481 aa13.46□□□□□ -0.25
SMAD4-214ENST00000592186 DDX19BQ9UMR2 479 aa13.46□□□□□ -0.25
SMAD4-214ENST00000592186 AAMPQ13685 434 aa13.45□□□□□ -0.26
SMAD4-214ENST00000592186 TBC1D9BQ66K14 1250 aa13.45□□□□□ -0.26
SMAD4-214ENST00000592186 NLRP10Q86W26 655 aa13.45□□□□□ -0.26
SMAD4-214ENST00000592186 TMEM57Q8N5G2 664 aa13.45□□□□□ -0.26
SMAD4-214ENST00000592186 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
SMAD4-214ENST00000592186 UTP14AQ9BVJ6 771 aaKnown RBP13.45□□□□□ -0.26
SMAD4-214ENST00000592186 C9orf78Q9NZ63 289 aaPredicted RBP13.45□□□□□ -0.26
SMAD4-214ENST00000592186 GNAI3P08754 354 aa13.44□□□□□ -0.26
SMAD4-214ENST00000592186 RLBP1P12271 317 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms