RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 PDE6BP35913 854 aa18.17■□□□□ 0.5
CLIP3-205ENST00000592017 FAM9BQ8IZU0 186 aa18.17■□□□□ 0.5
CLIP3-205ENST00000592017 BABAM1Q9NWV8 329 aa18.17■□□□□ 0.5
CLIP3-205ENST00000592017 ZNF652Q9Y2D9 606 aa18.17■□□□□ 0.5
CLIP3-205ENST00000592017 SCN7AQ01118 1682 aa18.16■□□□□ 0.5
CLIP3-205ENST00000592017 TTLL7Q6ZT98 887 aa18.16■□□□□ 0.5
CLIP3-205ENST00000592017 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
CLIP3-205ENST00000592017 ZNF622Q969S3 477 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLIP3-205ENST00000592017 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLIP3-205ENST00000592017 LAMB4A4D0S4 1761 aa18.16■□□□□ 0.5
CLIP3-205ENST00000592017 AFDNP55196 1824 aaKnown RBP18.16■□□□□ 0.5
CLIP3-205ENST00000592017 BRCA1P38398 1863 aaKnown RBP18.16■□□□□ 0.5
CLIP3-205ENST00000592017 MYL6BP14649 208 aa18.15■□□□□ 0.5
CLIP3-205ENST00000592017 PDZRN3Q9UPQ7 1066 aa18.15■□□□□ 0.5
CLIP3-205ENST00000592017 CHL1O00533 1208 aa18.14■□□□□ 0.49
CLIP3-205ENST00000592017 NPHP1O15259 732 aa18.14■□□□□ 0.49
CLIP3-205ENST00000592017 PRELPP51888 382 aa18.14■□□□□ 0.49
CLIP3-205ENST00000592017 ST5P78524 1137 aa18.14■□□□□ 0.49
CLIP3-205ENST00000592017 RNF181Q9P0P0 153 aa18.14■□□□□ 0.49
CLIP3-205ENST00000592017 FAM177BA6PVY3 158 aa18.13■□□□□ 0.49
CLIP3-205ENST00000592017 ERVV-1B6SEH8 477 aa18.13■□□□□ 0.49
CLIP3-205ENST00000592017 KIF3CO14782 793 aa18.13■□□□□ 0.49
CLIP3-205ENST00000592017 SRGNP10124 158 aa18.13■□□□□ 0.49
CLIP3-205ENST00000592017 EIF2S2P20042 333 aaKnown RBP18.13■□□□□ 0.49
CLIP3-205ENST00000592017 RASSF7Q02833 373 aa18.13■□□□□ 0.49
CLIP3-205ENST00000592017 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
CLIP3-205ENST00000592017 PDIA6Q15084 440 aa18.13■□□□□ 0.49
CLIP3-205ENST00000592017 KRT24Q2M2I5 525 aa18.13■□□□□ 0.49
CLIP3-205ENST00000592017 LRP10Q7Z4F1 713 aa18.13■□□□□ 0.49
CLIP3-205ENST00000592017 MAP3K15Q6ZN16 1313 aa18.13■□□□□ 0.49
CLIP3-205ENST00000592017 PROSER3Q2NL68 480 aa18.12■□□□□ 0.49
CLIP3-205ENST00000592017 TPTE2Q6XPS3 522 aa18.12■□□□□ 0.49
CLIP3-205ENST00000592017 NECTIN2Q92692 538 aa18.12■□□□□ 0.49
CLIP3-205ENST00000592017 CFAP44Q96MT7 982 aa18.12■□□□□ 0.49
CLIP3-205ENST00000592017 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
CLIP3-205ENST00000592017 KLRG2A4D1S0 409 aaPredicted RBP18.11■□□□□ 0.49
CLIP3-205ENST00000592017 NFKBIEO00221 500 aa18.11■□□□□ 0.49
CLIP3-205ENST00000592017 C21orf2O43822 256 aa18.11■□□□□ 0.49
CLIP3-205ENST00000592017 STYK1Q6J9G0 422 aa18.11■□□□□ 0.49
CLIP3-205ENST00000592017 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
CLIP3-205ENST00000592017 MBIPQ9NS73 344 aa18.11■□□□□ 0.49
CLIP3-205ENST00000592017 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
CLIP3-205ENST00000592017 ERBB4Q15303 1308 aa18.11■□□□□ 0.49
CLIP3-205ENST00000592017 ANXA1P04083 346 aa18.1■□□□□ 0.49
CLIP3-205ENST00000592017 GNAI1P63096 354 aa18.1■□□□□ 0.49
CLIP3-205ENST00000592017 KIF6Q6ZMV9 814 aa18.1■□□□□ 0.49
CLIP3-205ENST00000592017 MASTLQ96GX5 879 aa18.1■□□□□ 0.49
CLIP3-205ENST00000592017 NMRK2Q9NPI5 230 aa18.1■□□□□ 0.49
CLIP3-205ENST00000592017 IFT57Q9NWB7 429 aa18.1■□□□□ 0.49
CLIP3-205ENST00000592017 LMNB1P20700 586 aa18.09■□□□□ 0.49
CLIP3-205ENST00000592017 CNKSR1Q969H4 720 aa18.09■□□□□ 0.49
CLIP3-205ENST00000592017 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
CLIP3-205ENST00000592017 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
CLIP3-205ENST00000592017 GPTP24298 496 aa18.08■□□□□ 0.48
CLIP3-205ENST00000592017 PRPF40BQ6NWY9 871 aaKnown RBP18.08■□□□□ 0.48
CLIP3-205ENST00000592017 ANKRD31Q8N7Z5 1873 aa18.07■□□□□ 0.48
CLIP3-205ENST00000592017 UBN2Q6ZU65 1347 aa18.07■□□□□ 0.48
CLIP3-205ENST00000592017 ZNF853P0CG23 659 aa18.07■□□□□ 0.48
CLIP3-205ENST00000592017 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
CLIP3-205ENST00000592017 SUSD4Q5VX71 490 aa18.07■□□□□ 0.48
CLIP3-205ENST00000592017 NUTM1Q86Y26 1132 aa18.07■□□□□ 0.48
CLIP3-205ENST00000592017 WWC1Q8IX03 1113 aa18.07■□□□□ 0.48
CLIP3-205ENST00000592017 ZNF34Q8IZ26 560 aa18.07■□□□□ 0.48
CLIP3-205ENST00000592017 C7orf43Q8WVR3 580 aa18.07■□□□□ 0.48
CLIP3-205ENST00000592017 NPR1P16066 1061 aa18.06■□□□□ 0.48
CLIP3-205ENST00000592017 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
CLIP3-205ENST00000592017 HDGFL1Q5TGJ6 251 aa18.06■□□□□ 0.48
CLIP3-205ENST00000592017 DUSP27Q5VZP5 1158 aa18.06■□□□□ 0.48
CLIP3-205ENST00000592017 GIGYF2Q6Y7W6 1299 aaKnown RBP18.06■□□□□ 0.48
CLIP3-205ENST00000592017 GTF2E1P29083 439 aaPredicted RBP18.05■□□□□ 0.48
CLIP3-205ENST00000592017 COPS6Q7L5N1 327 aa18.05■□□□□ 0.48
CLIP3-205ENST00000592017 TSR2Q969E8 191 aaKnown RBP18.05■□□□□ 0.48
CLIP3-205ENST00000592017 NYXQ9GZU5 481 aa18.05■□□□□ 0.48
CLIP3-205ENST00000592017 ABCC12Q96J65 1359 aa18.04■□□□□ 0.48
CLIP3-205ENST00000592017 ELL2O00472 640 aaPredicted RBP18.04■□□□□ 0.48
CLIP3-205ENST00000592017 XAGE3Q8WTP9 111 aa18.04■□□□□ 0.48
CLIP3-205ENST00000592017 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
CLIP3-205ENST00000592017 CEP350Q5VT06 3117 aa18.04■□□□□ 0.48
CLIP3-205ENST00000592017 DLEC1Q9Y238 1755 aa18.04■□□□□ 0.48
CLIP3-205ENST00000592017 COL11A2P13942 1736 aaPredicted RBP18.03■□□□□ 0.48
CLIP3-205ENST00000592017 HOXB7P09629 217 aa18.03■□□□□ 0.48
CLIP3-205ENST00000592017 AIMP1Q12904 312 aaKnown RBP18.03■□□□□ 0.48
CLIP3-205ENST00000592017 DIEXFQ68CQ4 756 aaKnown RBP18.03■□□□□ 0.48
CLIP3-205ENST00000592017 CHPF2Q9P2E5 772 aa18.03■□□□□ 0.48
CLIP3-205ENST00000592017 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.48
CLIP3-205ENST00000592017 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
CLIP3-205ENST00000592017 NTSR2O95665 410 aa18.02■□□□□ 0.48
CLIP3-205ENST00000592017 CRY2Q49AN0 593 aa18.02■□□□□ 0.48
CLIP3-205ENST00000592017 OLFM4Q6UX06 510 aa18.02■□□□□ 0.48
CLIP3-205ENST00000592017 TAOK3Q9H2K8 898 aa18.02■□□□□ 0.48
CLIP3-205ENST00000592017 RRAGCQ9HB90 399 aa18.02■□□□□ 0.48
CLIP3-205ENST00000592017 LTBP3Q9NS15 1303 aa18.01■□□□□ 0.47
CLIP3-205ENST00000592017 CCER2I3L3R5 266 aa18.01■□□□□ 0.47
CLIP3-205ENST00000592017 TOMM70O94826 608 aa18.01■□□□□ 0.47
CLIP3-205ENST00000592017 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
CLIP3-205ENST00000592017 C3orf67Q6ZVT6 689 aa18.01■□□□□ 0.47
CLIP3-205ENST00000592017 C8orf58Q8NAV2 365 aa18.01■□□□□ 0.47
CLIP3-205ENST00000592017 IBTKQ9P2D0 1353 aaPredicted RBP18.01■□□□□ 0.47
CLIP3-205ENST00000592017 GLTPD2A6NH11 291 aa18■□□□□ 0.47
CLIP3-205ENST00000592017 HSPA6P17066 643 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms