RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ST18O60284 1047 aa24.07■■□□□ 1.44
MBD3-209ENST00000592012 TNPO1Q92973 898 aaKnown RBP24.07■■□□□ 1.44
MBD3-209ENST00000592012 GCKRQ14397 625 aa24.06■■□□□ 1.44
MBD3-209ENST00000592012 CLASRPQ8N2M8 674 aaKnown RBP24.06■■□□□ 1.44
MBD3-209ENST00000592012 PIP4K2AP48426 406 aaPredicted RBP24.06■■□□□ 1.44
MBD3-209ENST00000592012 ERC1Q8IUD2 1116 aa24.06■■□□□ 1.44
MBD3-209ENST00000592012 MYD88Q99836 296 aa24.06■■□□□ 1.44
MBD3-209ENST00000592012 TTC41PQ6P2S7 1318 aa24.05■■□□□ 1.44
MBD3-209ENST00000592012 MAP4K4O95819 1239 aaPredicted RBP24.05■■□□□ 1.44
MBD3-209ENST00000592012 CARD10Q9BWT7 1032 aa24.05■■□□□ 1.44
MBD3-209ENST00000592012 ANO2Q9NQ90 1003 aa24.05■■□□□ 1.44
MBD3-209ENST00000592012 AK9Q5TCS8 1911 aa24.05■■□□□ 1.44
MBD3-209ENST00000592012 IL25Q9H293 177 aa24.04■■□□□ 1.44
MBD3-209ENST00000592012 ERVV-2B6SEH9 535 aa24.03■■□□□ 1.44
MBD3-209ENST00000592012 NKX1-1Q15270 411 aaPredicted RBP24.03■■□□□ 1.44
MBD3-209ENST00000592012 GLI3P10071 1580 aa24.03■■□□□ 1.44
MBD3-209ENST00000592012 GLRX3O76003 335 aaKnown RBP24.02■■□□□ 1.44
MBD3-209ENST00000592012 IL2RBP14784 551 aa24.02■■□□□ 1.44
MBD3-209ENST00000592012 CNTROBQ8N137 903 aa24.02■■□□□ 1.44
MBD3-209ENST00000592012 EPB41L2O43491 1005 aaKnown RBP24.02■■□□□ 1.44
MBD3-209ENST00000592012 ANAPC15P60006 121 aa24.02■■□□□ 1.44
MBD3-209ENST00000592012 ABCA3Q99758 1704 aa24.02■■□□□ 1.44
MBD3-209ENST00000592012 MCCP23508 829 aa24.01■■□□□ 1.43
MBD3-209ENST00000592012 PALD1Q9ULE6 856 aa24.01■■□□□ 1.43
MBD3-209ENST00000592012 SASH1O94885 1247 aa24.01■■□□□ 1.43
MBD3-209ENST00000592012 IL17RAQ96F46 866 aa24.01■■□□□ 1.43
MBD3-209ENST00000592012 ECHDC1Q9NTX5 307 aa24■■□□□ 1.43
MBD3-209ENST00000592012 DDX11L8A8MPP1 907 aa24■■□□□ 1.43
MBD3-209ENST00000592012 G3BP1Q13283 466 aaKnown RBP eCLIP24■■□□□ 1.43
MBD3-209ENST00000592012 EPHA10Q5JZY3 1008 aa24■■□□□ 1.43
MBD3-209ENST00000592012 NEK4P51957 841 aa23.99■■□□□ 1.43
MBD3-209ENST00000592012 STRN4Q9NRL3 753 aa23.99■■□□□ 1.43
MBD3-209ENST00000592012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.99■■□□□ 1.43
MBD3-209ENST00000592012 SGSM2O43147 1006 aa23.99■■□□□ 1.43
MBD3-209ENST00000592012 TRAK2O60296 914 aa23.99■■□□□ 1.43
MBD3-209ENST00000592012 IFIT2P09913 472 aaKnown RBP23.99■■□□□ 1.43
MBD3-209ENST00000592012 LAMB4A4D0S4 1761 aa23.98■■□□□ 1.43
MBD3-209ENST00000592012 NBPF26B4DH59 902 aa23.98■■□□□ 1.43
MBD3-209ENST00000592012 EVA1CP58658 441 aa23.98■■□□□ 1.43
MBD3-209ENST00000592012 NBPF14Q5TI25 921 aa23.98■■□□□ 1.43
MBD3-209ENST00000592012 NBPF10Q6P3W6 841 aaKnown RBP23.98■■□□□ 1.43
MBD3-209ENST00000592012 NBPF15Q8N660 670 aa23.98■■□□□ 1.43
MBD3-209ENST00000592012 PLBD2Q8NHP8 589 aa23.98■■□□□ 1.43
MBD3-209ENST00000592012 DDX54Q8TDD1 881 aaKnown RBP23.98■■□□□ 1.43
MBD3-209ENST00000592012 GBP4Q96PP9 640 aa23.98■■□□□ 1.43
MBD3-209ENST00000592012 ERBB4Q15303 1308 aa23.97■■□□□ 1.43
MBD3-209ENST00000592012 AACSQ86V21 672 aa23.97■■□□□ 1.43
MBD3-209ENST00000592012 EAF2Q96CJ1 260 aaPredicted RBP23.96■■□□□ 1.43
MBD3-209ENST00000592012 GPATCH3Q96I76 525 aa23.96■■□□□ 1.43
MBD3-209ENST00000592012 NHSL1Q5SYE7 1610 aa23.96■■□□□ 1.43
MBD3-209ENST00000592012 UBR2Q8IWV8 1755 aa23.95■■□□□ 1.43
MBD3-209ENST00000592012 ARFGEF2Q9Y6D5 1785 aa23.95■■□□□ 1.43
MBD3-209ENST00000592012 SSFA2P28290 1259 aa23.95■■□□□ 1.43
MBD3-209ENST00000592012 HSPA4P34932 840 aa23.95■■□□□ 1.43
MBD3-209ENST00000592012 CWC22Q9HCG8 908 aaKnown RBP23.95■■□□□ 1.43
MBD3-209ENST00000592012 CLEC17AQ6ZS10 378 aa23.95■■□□□ 1.42
MBD3-209ENST00000592012 KLHDC4Q8TBB5 520 aa23.95■■□□□ 1.42
MBD3-209ENST00000592012 SIL1Q9H173 461 aa23.95■■□□□ 1.42
MBD3-209ENST00000592012 SHANK3Q9BYB0 1731 aa23.95■■□□□ 1.42
MBD3-209ENST00000592012 ATP5J2-PTCD1G3V325 749 aa23.94■■□□□ 1.42
MBD3-209ENST00000592012 PTCD1O75127 700 aaKnown RBP23.94■■□□□ 1.42
MBD3-209ENST00000592012 JARID2Q92833 1246 aaPredicted RBP23.94■■□□□ 1.42
MBD3-209ENST00000592012 AFDNP55196 1824 aaKnown RBP23.94■■□□□ 1.42
MBD3-209ENST00000592012 COL15A1P39059 1388 aa23.94■■□□□ 1.42
MBD3-209ENST00000592012 MCM2P49736 904 aa23.94■■□□□ 1.42
MBD3-209ENST00000592012 RABL6Q3YEC7 729 aaPredicted RBP23.93■■□□□ 1.42
MBD3-209ENST00000592012 CWC27Q6UX04 472 aaKnown RBP23.93■■□□□ 1.42
MBD3-209ENST00000592012 UBE3BQ7Z3V4 1068 aa23.93■■□□□ 1.42
MBD3-209ENST00000592012 KCPQ6ZWJ8 1503 aa23.93■■□□□ 1.42
MBD3-209ENST00000592012 RAD50Q92878 1312 aa23.93■■□□□ 1.42
MBD3-209ENST00000592012 ZGPATQ8N5A5 531 aaKnown RBP23.93■■□□□ 1.42
MBD3-209ENST00000592012 LSG1Q9H089 658 aaKnown RBP23.93■■□□□ 1.42
MBD3-209ENST00000592012 COPRSQ9NQ92 184 aa23.93■■□□□ 1.42
MBD3-209ENST00000592012 A0A087WZG4 1122 aa23.92■■□□□ 1.42
MBD3-209ENST00000592012 NUCB2P80303 420 aa23.92■■□□□ 1.42
MBD3-209ENST00000592012 CYP2E1P05181 493 aaPredicted RBP23.92■■□□□ 1.42
MBD3-209ENST00000592012 RFX5P48382 616 aaPredicted RBP23.92■■□□□ 1.42
MBD3-209ENST00000592012 CASP7P55210 303 aa23.92■■□□□ 1.42
MBD3-209ENST00000592012 TMX3Q96JJ7 454 aa23.92■■□□□ 1.42
MBD3-209ENST00000592012 CCDC8Q9H0W5 538 aaPredicted RBP23.92■■□□□ 1.42
MBD3-209ENST00000592012 A1BGP04217 495 aa23.91■■□□□ 1.42
MBD3-209ENST00000592012 EVI5LQ96CN4 794 aa23.91■■□□□ 1.42
MBD3-209ENST00000592012 PAPPAQ13219 1627 aa23.9■■□□□ 1.42
MBD3-209ENST00000592012 PTPN12Q05209 780 aaKnown RBP23.9■■□□□ 1.42
MBD3-209ENST00000592012 TTLL7Q6ZT98 887 aa23.9■■□□□ 1.42
MBD3-209ENST00000592012 DIAPH3Q9NSV4 1193 aa23.89■■□□□ 1.42
MBD3-209ENST00000592012 TLR7Q9NYK1 1049 aaKnown RBP23.89■■□□□ 1.42
MBD3-209ENST00000592012 TNS2Q63HR2 1409 aa23.89■■□□□ 1.42
MBD3-209ENST00000592012 GZF1Q9H116 711 aaPredicted RBP23.89■■□□□ 1.41
MBD3-209ENST00000592012 PKP1Q13835 747 aa23.88■■□□□ 1.41
MBD3-209ENST00000592012 KIAA1211Q6ZU35 1233 aa23.88■■□□□ 1.41
MBD3-209ENST00000592012 RUFY2Q8WXA3 655 aa23.88■■□□□ 1.41
MBD3-209ENST00000592012 UPF3BQ9BZI7 483 aaKnown RBP23.88■■□□□ 1.41
MBD3-209ENST00000592012 IL27Q8NEV9 243 aa23.87■■□□□ 1.41
MBD3-209ENST00000592012 H7C1W4 665 aa23.87■■□□□ 1.41
MBD3-209ENST00000592012 BAG4O95429 457 aaKnown RBP23.87■■□□□ 1.41
MBD3-209ENST00000592012 CUL4AQ13619 759 aa23.87■■□□□ 1.41
MBD3-209ENST00000592012 BTG4Q9NY30 223 aa23.87■■□□□ 1.41
MBD3-209ENST00000592012 PTMSP20962 102 aa23.86■■□□□ 1.41
MBD3-209ENST00000592012 SNX14Q9Y5W7 946 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms