RNA–Protein interactions for RNA: ENST00000591745.1

LSM7-207, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 543 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-207ENST00000591745 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
LSM7-207ENST00000591745 RASSF7Q02833 373 aa17.73■□□□□ 0.43
LSM7-207ENST00000591745 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
LSM7-207ENST00000591745 CCDC87Q9NVE4 849 aa17.73■□□□□ 0.43
LSM7-207ENST00000591745 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
LSM7-207ENST00000591745 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
LSM7-207ENST00000591745 CHRNA5P30532 468 aa17.72■□□□□ 0.43
LSM7-207ENST00000591745 DDR1Q08345 913 aa17.72■□□□□ 0.43
LSM7-207ENST00000591745 TAF7Q15545 349 aaPredicted RBP17.72■□□□□ 0.43
LSM7-207ENST00000591745 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
LSM7-207ENST00000591745 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
LSM7-207ENST00000591745 KDM6AO15550 1401 aaPredicted RBP17.72■□□□□ 0.43
LSM7-207ENST00000591745 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
LSM7-207ENST00000591745 CEMIPQ8WUJ3 1361 aa17.71■□□□□ 0.43
LSM7-207ENST00000591745 TRAPPC3LQ5T215 181 aa17.71■□□□□ 0.43
LSM7-207ENST00000591745 NLGN1Q8N2Q7 840 aa17.71■□□□□ 0.43
LSM7-207ENST00000591745 SMC1BQ8NDV3 1235 aa17.71■□□□□ 0.43
LSM7-207ENST00000591745 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.43
LSM7-207ENST00000591745 SRP68Q9UHB9 627 aaKnown RBP17.71■□□□□ 0.43
LSM7-207ENST00000591745 VAMP4O75379 141 aa17.7■□□□□ 0.42
LSM7-207ENST00000591745 PHKG2P15735 406 aa17.7■□□□□ 0.42
LSM7-207ENST00000591745 HMGB2P26583 209 aaKnown RBP17.7■□□□□ 0.42
LSM7-207ENST00000591745 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
LSM7-207ENST00000591745 TWISTNBQ3B726 338 aaPredicted RBP17.7■□□□□ 0.42
LSM7-207ENST00000591745 RTCBQ9Y3I0 505 aaKnown RBP17.7■□□□□ 0.42
LSM7-207ENST00000591745 BCAR3O75815 825 aa17.69■□□□□ 0.42
LSM7-207ENST00000591745 SLC34A2O95436 690 aa17.69■□□□□ 0.42
LSM7-207ENST00000591745 HOXB7P09629 217 aa17.69■□□□□ 0.42
LSM7-207ENST00000591745 PIM2Q9P1W9 311 aa17.69■□□□□ 0.42
LSM7-207ENST00000591745 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
LSM7-207ENST00000591745 ZNF530Q6P9A1 599 aaPredicted RBP17.68■□□□□ 0.42
LSM7-207ENST00000591745 MCM10Q7L590 875 aa17.68■□□□□ 0.42
LSM7-207ENST00000591745 NRXN2Q9P2S2 1712 aa17.68■□□□□ 0.42
LSM7-207ENST00000591745 PARP3Q9Y6F1 533 aa17.68■□□□□ 0.42
LSM7-207ENST00000591745 CNTNAP4Q9C0A0 1308 aa17.68■□□□□ 0.42
LSM7-207ENST00000591745 TEFQ10587 303 aa17.67■□□□□ 0.42
LSM7-207ENST00000591745 DALRD3Q5D0E6 543 aaKnown RBP17.67■□□□□ 0.42
LSM7-207ENST00000591745 FTSJ3Q8IY81 847 aaKnown RBP17.67■□□□□ 0.42
LSM7-207ENST00000591745 POTECB2RU33 542 aa17.66■□□□□ 0.42
LSM7-207ENST00000591745 RPS6KA4O75676 772 aa17.66■□□□□ 0.42
LSM7-207ENST00000591745 ATF7IPQ6VMQ6 1270 aa17.66■□□□□ 0.42
LSM7-207ENST00000591745 IFNL2Q8IZJ0 200 aa17.66■□□□□ 0.42
LSM7-207ENST00000591745 SSH1Q8WYL5 1049 aa17.66■□□□□ 0.42
LSM7-207ENST00000591745 DICER1Q9UPY3 1922 aaKnown RBP17.65■□□□□ 0.42
LSM7-207ENST00000591745 PLIN1O60240 522 aa17.65■□□□□ 0.42
LSM7-207ENST00000591745 RC3H1Q5TC82 1133 aaKnown RBP17.65■□□□□ 0.42
LSM7-207ENST00000591745 DZIP1LQ8IYY4 767 aaKnown RBP17.65■□□□□ 0.42
LSM7-207ENST00000591745 IL17REQ8NFR9 667 aa17.65■□□□□ 0.42
LSM7-207ENST00000591745 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
LSM7-207ENST00000591745 THUMPD2Q9BTF0 503 aaKnown RBP17.65■□□□□ 0.42
LSM7-207ENST00000591745 API5Q9BZZ5 524 aaKnown RBP17.65■□□□□ 0.42
LSM7-207ENST00000591745 PTPRCP08575 1304 aa17.65■□□□□ 0.42
LSM7-207ENST00000591745 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
LSM7-207ENST00000591745 RFC4P35249 363 aa17.64■□□□□ 0.41
LSM7-207ENST00000591745 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
LSM7-207ENST00000591745 EXOC6Q8TAG9 804 aa17.64■□□□□ 0.41
LSM7-207ENST00000591745 FRAT1Q92837 279 aaPredicted RBP17.64■□□□□ 0.41
LSM7-207ENST00000591745 CRBNQ96SW2 442 aa17.64■□□□□ 0.41
LSM7-207ENST00000591745 DDX19BQ9UMR2 479 aa17.64■□□□□ 0.41
LSM7-207ENST00000591745 USP42Q9H9J4 1324 aaKnown RBP17.63■□□□□ 0.41
LSM7-207ENST00000591745 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
LSM7-207ENST00000591745 ANKRD31Q8N7Z5 1873 aa17.63■□□□□ 0.41
LSM7-207ENST00000591745 POLRMTO00411 1230 aaKnown RBP17.62■□□□□ 0.41
LSM7-207ENST00000591745 CCDC30Q5VVM6 783 aa17.62■□□□□ 0.41
LSM7-207ENST00000591745 STK31Q9BXU1 1019 aa17.62■□□□□ 0.41
LSM7-207ENST00000591745 COL11A2P13942 1736 aaPredicted RBP17.61■□□□□ 0.41
LSM7-207ENST00000591745 GLTPD2A6NH11 291 aa17.61■□□□□ 0.41
LSM7-207ENST00000591745 FOXN1O15353 648 aa17.61■□□□□ 0.41
LSM7-207ENST00000591745 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
LSM7-207ENST00000591745 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
LSM7-207ENST00000591745 MRPL50Q8N5N7 158 aaKnown RBP17.61■□□□□ 0.41
LSM7-207ENST00000591745 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
LSM7-207ENST00000591745 CENPQQ7L2Z9 268 aaPredicted RBP17.6■□□□□ 0.41
LSM7-207ENST00000591745 MKRN1Q9UHC7 482 aaKnown RBP17.6■□□□□ 0.41
LSM7-207ENST00000591745 CACNA1SQ13698 1873 aa17.6■□□□□ 0.41
LSM7-207ENST00000591745 CARMIL3Q8ND23 1372 aa17.59■□□□□ 0.41
LSM7-207ENST00000591745 NFKBIEO00221 500 aa17.59■□□□□ 0.41
LSM7-207ENST00000591745 POTEIP0CG38 1075 aa17.59■□□□□ 0.41
LSM7-207ENST00000591745 POTEJP0CG39 1038 aa17.59■□□□□ 0.41
LSM7-207ENST00000591745 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
LSM7-207ENST00000591745 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
LSM7-207ENST00000591745 C8orf58Q8NAV2 365 aa17.59■□□□□ 0.41
LSM7-207ENST00000591745 NOB1Q9ULX3 412 aaKnown RBP17.59■□□□□ 0.41
LSM7-207ENST00000591745 BTBD11A6QL63 1104 aa17.58■□□□□ 0.4
LSM7-207ENST00000591745 TRIM27P14373 513 aa17.58■□□□□ 0.4
LSM7-207ENST00000591745 TM4SF1P30408 202 aa17.58■□□□□ 0.4
LSM7-207ENST00000591745 CLUAP1Q96AJ1 413 aa17.58■□□□□ 0.4
LSM7-207ENST00000591745 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.4
LSM7-207ENST00000591745 ZC3H4Q9UPT8 1303 aaKnown RBP17.57■□□□□ 0.4
LSM7-207ENST00000591745 B4GALNT3Q6L9W6 998 aa17.57■□□□□ 0.4
LSM7-207ENST00000591745 ERVV-2B6SEH9 535 aa17.56■□□□□ 0.4
LSM7-207ENST00000591745 PTCD1O75127 700 aaKnown RBP17.56■□□□□ 0.4
LSM7-207ENST00000591745 LMNB1P20700 586 aa17.56■□□□□ 0.4
LSM7-207ENST00000591745 C20orf194Q5TEA3 1177 aa17.56■□□□□ 0.4
LSM7-207ENST00000591745 TSPYL6Q8N831 410 aa17.56■□□□□ 0.4
LSM7-207ENST00000591745 RNF39Q9H2S5 420 aa17.56■□□□□ 0.4
LSM7-207ENST00000591745 INTS5Q6P9B9 1019 aaKnown RBP17.55■□□□□ 0.4
LSM7-207ENST00000591745 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
LSM7-207ENST00000591745 SLC52A2Q9HAB3 445 aa17.55■□□□□ 0.4
LSM7-207ENST00000591745 COG6Q9Y2V7 657 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms