RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 MKRN1Q9UHC7 482 aaKnown RBP21.45■■□□□ 1.02
DDX39A-216ENST00000591275 LTBP3Q9NS15 1303 aa21.45■■□□□ 1.02
DDX39A-216ENST00000591275 KCNQ3O43525 872 aa21.44■■□□□ 1.02
DDX39A-216ENST00000591275 PIP4K2AP48426 406 aaPredicted RBP21.44■■□□□ 1.02
DDX39A-216ENST00000591275 SRGNP10124 158 aa21.43■■□□□ 1.02
DDX39A-216ENST00000591275 ST5P78524 1137 aa21.43■■□□□ 1.02
DDX39A-216ENST00000591275 STYK1Q6J9G0 422 aa21.43■■□□□ 1.02
DDX39A-216ENST00000591275 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
DDX39A-216ENST00000591275 CREBZFQ9NS37 354 aa21.43■■□□□ 1.02
DDX39A-216ENST00000591275 DZIP3Q86Y13 1208 aaKnown RBP21.42■■□□□ 1.02
DDX39A-216ENST00000591275 BCORQ6W2J9 1755 aa21.41■■□□□ 1.02
DDX39A-216ENST00000591275 MASTLQ96GX5 879 aa21.41■■□□□ 1.02
DDX39A-216ENST00000591275 BTBD11A6QL63 1104 aa21.4■■□□□ 1.02
DDX39A-216ENST00000591275 ARFGEF2Q9Y6D5 1785 aa21.4■■□□□ 1.02
DDX39A-216ENST00000591275 CEMIPQ8WUJ3 1361 aa21.39■■□□□ 1.02
DDX39A-216ENST00000591275 SOGA3Q5TF21 947 aa21.39■■□□□ 1.01
DDX39A-216ENST00000591275 NBPF5PQ86XG9 351 aaPredicted RBP21.39■■□□□ 1.01
DDX39A-216ENST00000591275 PHACTR3Q96KR7 559 aa21.39■■□□□ 1.01
DDX39A-216ENST00000591275 USP16Q9Y5T5 823 aa21.39■■□□□ 1.01
DDX39A-216ENST00000591275 PRAMEF22A3QJZ6 481 aa21.38■■□□□ 1.01
DDX39A-216ENST00000591275 IQCA1LA6NCM1 817 aa21.36■■□□□ 1.01
DDX39A-216ENST00000591275 PRKAR2BP31323 418 aa21.36■■□□□ 1.01
DDX39A-216ENST00000591275 CCDC93Q567U6 631 aa21.36■■□□□ 1.01
DDX39A-216ENST00000591275 LDHDQ86WU2 507 aa21.36■■□□□ 1.01
DDX39A-216ENST00000591275 C7orf43Q8WVR3 580 aa21.36■■□□□ 1.01
DDX39A-216ENST00000591275 TAF1DQ9H5J8 278 aaPredicted RBP21.36■■□□□ 1.01
DDX39A-216ENST00000591275 CNTNAP1P78357 1384 aa21.36■■□□□ 1.01
DDX39A-216ENST00000591275 FOXN1O15353 648 aa21.35■■□□□ 1.01
DDX39A-216ENST00000591275 OLFM4Q6UX06 510 aa21.35■■□□□ 1.01
DDX39A-216ENST00000591275 L3MBTL3Q96JM7 780 aaPredicted RBP21.35■■□□□ 1.01
DDX39A-216ENST00000591275 ZNF277Q9NRM2 450 aaPredicted RBP21.35■■□□□ 1.01
DDX39A-216ENST00000591275 SCN4AP35499 1836 aa21.34■■□□□ 1.01
DDX39A-216ENST00000591275 PASKQ96RG2 1323 aa21.34■■□□□ 1.01
DDX39A-216ENST00000591275 ZNF541Q9H0D2 1346 aa21.34■■□□□ 1.01
DDX39A-216ENST00000591275 FAM177BA6PVY3 158 aa21.34■■□□□ 1.01
DDX39A-216ENST00000591275 EAPPQ56P03 285 aaPredicted RBP21.34■■□□□ 1.01
DDX39A-216ENST00000591275 NPR1P16066 1061 aa21.33■■□□□ 1.01
DDX39A-216ENST00000591275 FKBP4Q02790 459 aaKnown RBP eCLIP21.33■■□□□ 1.01
DDX39A-216ENST00000591275 CLEC4GQ6UXB4 293 aa21.33■■□□□ 1.01
DDX39A-216ENST00000591275 RSPH6AQ9H0K4 717 aa21.33■■□□□ 1.01
DDX39A-216ENST00000591275 ZNF652Q9Y2D9 606 aa21.33■■□□□ 1.01
DDX39A-216ENST00000591275 NPC1L1Q9UHC9 1359 aa21.33■■□□□ 1
DDX39A-216ENST00000591275 MCM10Q7L590 875 aa21.32■■□□□ 1
DDX39A-216ENST00000591275 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
DDX39A-216ENST00000591275 SNRPA1P09661 255 aaKnown RBP21.31■■□□□ 1
DDX39A-216ENST00000591275 CLEC11AQ9Y240 323 aa21.31■■□□□ 1
DDX39A-216ENST00000591275 TMEM88BA6NKF7 163 aa21.3■■□□□ 1
DDX39A-216ENST00000591275 NBPF26B4DH59 902 aa21.3■■□□□ 1
DDX39A-216ENST00000591275 ITGBL1O95965 494 aaPredicted RBP21.3■■□□□ 1
DDX39A-216ENST00000591275 VEGFBP49765 207 aa21.3■■□□□ 1
DDX39A-216ENST00000591275 NBPF10Q6P3W6 841 aaKnown RBP21.3■■□□□ 1
DDX39A-216ENST00000591275 TPTE2Q6XPS3 522 aa21.3■■□□□ 1
DDX39A-216ENST00000591275 NBPF15Q8N660 670 aa21.3■■□□□ 1
DDX39A-216ENST00000591275 KLRG2A4D1S0 409 aaPredicted RBP21.29■■□□□ 1
DDX39A-216ENST00000591275 HACL1Q9UJ83 578 aa21.29■■□□□ 1
DDX39A-216ENST00000591275 DCTN1Q14203 1278 aa21.28■■□□□ 1
DDX39A-216ENST00000591275 RTKN2Q8IZC4 609 aa21.28■■□□□ 1
DDX39A-216ENST00000591275 RTF1Q92541 710 aaKnown RBP21.28■■□□□ 1
DDX39A-216ENST00000591275 AIDAQ96BJ3 306 aa21.28■■□□□ 1
DDX39A-216ENST00000591275 CFAP53Q96M91 514 aa21.28■■□□□ 1
DDX39A-216ENST00000591275 RNF123Q5XPI4 1314 aa21.28■■□□□ 1
DDX39A-216ENST00000591275 EPHX2P34913 555 aa21.27■■□□□ 1
DDX39A-216ENST00000591275 U2AF1L5P0DN76 240 aaPredicted RBP21.26■□□□□ 0.99
DDX39A-216ENST00000591275 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
DDX39A-216ENST00000591275 U2AF1Q01081 240 aaKnown RBP eCLIP21.26■□□□□ 0.99
DDX39A-216ENST00000591275 HLFQ16534 295 aa21.26■□□□□ 0.99
DDX39A-216ENST00000591275 MAP1SQ66K74 1059 aaPredicted RBP21.26■□□□□ 0.99
DDX39A-216ENST00000591275 SYNE4Q8N205 404 aa21.26■□□□□ 0.99
DDX39A-216ENST00000591275 PRDM10Q9NQV6 1147 aa21.26■□□□□ 0.99
DDX39A-216ENST00000591275 ADAMTSL1Q8N6G6 1762 aa21.25■□□□□ 0.99
DDX39A-216ENST00000591275 GTF2E1P29083 439 aaPredicted RBP21.25■□□□□ 0.99
DDX39A-216ENST00000591275 CTCFP49711 727 aaPredicted RBP21.25■□□□□ 0.99
DDX39A-216ENST00000591275 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
DDX39A-216ENST00000591275 FZD9O00144 591 aa21.24■□□□□ 0.99
DDX39A-216ENST00000591275 ALDH1B1P30837 517 aa21.24■□□□□ 0.99
DDX39A-216ENST00000591275 CNTROBQ8N137 903 aa21.24■□□□□ 0.99
DDX39A-216ENST00000591275 NGEFQ8N5V2 710 aa21.23■□□□□ 0.99
DDX39A-216ENST00000591275 MIS18AQ9NYP9 233 aa21.23■□□□□ 0.99
DDX39A-216ENST00000591275 RGL2O15211 777 aa21.22■□□□□ 0.99
DDX39A-216ENST00000591275 LBX1P52954 281 aa21.22■□□□□ 0.99
DDX39A-216ENST00000591275 PNMA8AQ86V59 439 aaPredicted RBP21.22■□□□□ 0.99
DDX39A-216ENST00000591275 NUTM1Q86Y26 1132 aa21.22■□□□□ 0.99
DDX39A-216ENST00000591275 WBP1LQ9NX94 342 aa21.22■□□□□ 0.99
DDX39A-216ENST00000591275 ABCC12Q96J65 1359 aa21.22■□□□□ 0.99
DDX39A-216ENST00000591275 DEFB115Q30KQ5 88 aa21.21■□□□□ 0.99
DDX39A-216ENST00000591275 GPC2Q8N158 579 aa21.21■□□□□ 0.99
DDX39A-216ENST00000591275 GJA3Q9Y6H8 435 aa21.21■□□□□ 0.99
DDX39A-216ENST00000591275 RASSF10A6NK89 507 aa21.2■□□□□ 0.98
DDX39A-216ENST00000591275 JDP2Q8WYK2 163 aa21.2■□□□□ 0.98
DDX39A-216ENST00000591275 SNED1Q8TER0 1413 aa21.2■□□□□ 0.98
DDX39A-216ENST00000591275 COL4A5P29400 1685 aa21.19■□□□□ 0.98
DDX39A-216ENST00000591275 TAF7Q15545 349 aaPredicted RBP21.19■□□□□ 0.98
DDX39A-216ENST00000591275 PSMD1Q99460 953 aa21.19■□□□□ 0.98
DDX39A-216ENST00000591275 ABT1Q9ULW3 272 aaKnown RBP21.19■□□□□ 0.98
DDX39A-216ENST00000591275 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
DDX39A-216ENST00000591275 PPP2R1AP30153 589 aa21.18■□□□□ 0.98
DDX39A-216ENST00000591275 CRY2Q49AN0 593 aa21.18■□□□□ 0.98
DDX39A-216ENST00000591275 SLC51AQ86UW1 340 aa21.18■□□□□ 0.98
DDX39A-216ENST00000591275 NUP98P52948 1817 aa21.18■□□□□ 0.98
DDX39A-216ENST00000591275 HTATSF1O43719 755 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms