RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 ADCY9O60503 1353 aa18.04■□□□□ 0.48
NEDD4L-228ENST00000590248 COL11A2P13942 1736 aaPredicted RBP18.03■□□□□ 0.48
NEDD4L-228ENST00000590248 ZNF316A6NFI3 1004 aaPredicted RBP18.03■□□□□ 0.48
NEDD4L-228ENST00000590248 H0YIN7 160 aa18.03■□□□□ 0.48
NEDD4L-228ENST00000590248 NPHP1O15259 732 aa18.03■□□□□ 0.48
NEDD4L-228ENST00000590248 TTLL7Q6ZT98 887 aa18.03■□□□□ 0.48
NEDD4L-228ENST00000590248 NIP7Q9Y221 180 aaKnown RBP eCLIP18.03■□□□□ 0.48
NEDD4L-228ENST00000590248 SENP3-EIF4A1A0A087X0R7 540 aa18.02■□□□□ 0.48
NEDD4L-228ENST00000590248 KRT24Q2M2I5 525 aa18.02■□□□□ 0.48
NEDD4L-228ENST00000590248 CLEC4GQ6UXB4 293 aa18.02■□□□□ 0.48
NEDD4L-228ENST00000590248 CNBD1Q8NA66 436 aa18.02■□□□□ 0.48
NEDD4L-228ENST00000590248 ZNF622Q969S3 477 aaKnown RBP eCLIP18.02■□□□□ 0.48
NEDD4L-228ENST00000590248 BRIP1Q9BX63 1249 aa18.02■□□□□ 0.48
NEDD4L-228ENST00000590248 GPBP1L1Q9HC44 474 aaPredicted RBP18.02■□□□□ 0.48
NEDD4L-228ENST00000590248 ZNF652Q9Y2D9 606 aa18.02■□□□□ 0.48
NEDD4L-228ENST00000590248 APAF1O14727 1248 aa18.01■□□□□ 0.47
NEDD4L-228ENST00000590248 ANXA1P04083 346 aa18.01■□□□□ 0.47
NEDD4L-228ENST00000590248 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
NEDD4L-228ENST00000590248 ZNF219Q9P2Y4 722 aaPredicted RBP18.01■□□□□ 0.47
NEDD4L-228ENST00000590248 C1QTNF8P60827 252 aa18■□□□□ 0.47
NEDD4L-228ENST00000590248 C9orf131Q5VYM1 1079 aa18■□□□□ 0.47
NEDD4L-228ENST00000590248 NBPF5PQ86XG9 351 aaPredicted RBP18■□□□□ 0.47
NEDD4L-228ENST00000590248 TTLL6Q8N841 843 aa18■□□□□ 0.47
NEDD4L-228ENST00000590248 SLX4Q8IY92 1834 aa18■□□□□ 0.47
NEDD4L-228ENST00000590248 CHL1O00533 1208 aa17.99■□□□□ 0.47
NEDD4L-228ENST00000590248 PDE6BP35913 854 aa17.99■□□□□ 0.47
NEDD4L-228ENST00000590248 ST5P78524 1137 aa17.99■□□□□ 0.47
NEDD4L-228ENST00000590248 ZBTB3Q9H5J0 574 aa17.99■□□□□ 0.47
NEDD4L-228ENST00000590248 BABAM1Q9NWV8 329 aa17.99■□□□□ 0.47
NEDD4L-228ENST00000590248 RASSF7Q02833 373 aa17.98■□□□□ 0.47
NEDD4L-228ENST00000590248 PDIA6Q15084 440 aa17.98■□□□□ 0.47
NEDD4L-228ENST00000590248 PROSER3Q2NL68 480 aa17.98■□□□□ 0.47
NEDD4L-228ENST00000590248 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
NEDD4L-228ENST00000590248 GPTP24298 496 aa17.97■□□□□ 0.47
NEDD4L-228ENST00000590248 PRELPP51888 382 aa17.96■□□□□ 0.47
NEDD4L-228ENST00000590248 TPTE2Q6XPS3 522 aa17.96■□□□□ 0.47
NEDD4L-228ENST00000590248 KIF6Q6ZMV9 814 aa17.96■□□□□ 0.47
NEDD4L-228ENST00000590248 RNF181Q9P0P0 153 aa17.96■□□□□ 0.47
NEDD4L-228ENST00000590248 ERVV-1B6SEH8 477 aa17.95■□□□□ 0.46
NEDD4L-228ENST00000590248 C21orf2O43822 256 aa17.95■□□□□ 0.46
NEDD4L-228ENST00000590248 SRGNP10124 158 aa17.95■□□□□ 0.46
NEDD4L-228ENST00000590248 LRP10Q7Z4F1 713 aa17.95■□□□□ 0.46
NEDD4L-228ENST00000590248 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
NEDD4L-228ENST00000590248 GTF2E1P29083 439 aaPredicted RBP17.94■□□□□ 0.46
NEDD4L-228ENST00000590248 AIMP1Q12904 312 aaKnown RBP17.94■□□□□ 0.46
NEDD4L-228ENST00000590248 FER1L6Q2WGJ9 1857 aa17.94■□□□□ 0.46
NEDD4L-228ENST00000590248 ERBB4Q15303 1308 aa17.94■□□□□ 0.46
NEDD4L-228ENST00000590248 RGL2O15211 777 aa17.93■□□□□ 0.46
NEDD4L-228ENST00000590248 MASTLQ96GX5 879 aa17.93■□□□□ 0.46
NEDD4L-228ENST00000590248 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
NEDD4L-228ENST00000590248 MBIPQ9NS73 344 aa17.93■□□□□ 0.46
NEDD4L-228ENST00000590248 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
NEDD4L-228ENST00000590248 UBN2Q6ZU65 1347 aa17.93■□□□□ 0.46
NEDD4L-228ENST00000590248 ARFGEF2Q9Y6D5 1785 aa17.92■□□□□ 0.46
NEDD4L-228ENST00000590248 NFKBIEO00221 500 aa17.92■□□□□ 0.46
NEDD4L-228ENST00000590248 KIF3CO14782 793 aa17.92■□□□□ 0.46
NEDD4L-228ENST00000590248 ERFEQ4G0M1 354 aa17.92■□□□□ 0.46
NEDD4L-228ENST00000590248 SUSD4Q5VX71 490 aa17.92■□□□□ 0.46
NEDD4L-228ENST00000590248 STYK1Q6J9G0 422 aa17.92■□□□□ 0.46
NEDD4L-228ENST00000590248 COPS6Q7L5N1 327 aa17.92■□□□□ 0.46
NEDD4L-228ENST00000590248 TNRC6CQ9HCJ0 1690 aaKnown RBP17.92■□□□□ 0.46
NEDD4L-228ENST00000590248 ANP32CO43423 234 aa17.91■□□□□ 0.46
NEDD4L-228ENST00000590248 PRPF40BQ6NWY9 871 aaKnown RBP17.91■□□□□ 0.46
NEDD4L-228ENST00000590248 GIGYF2Q6Y7W6 1299 aaKnown RBP17.91■□□□□ 0.46
NEDD4L-228ENST00000590248 ZNF34Q8IZ26 560 aa17.91■□□□□ 0.46
NEDD4L-228ENST00000590248 XAGE3Q8WTP9 111 aa17.91■□□□□ 0.46
NEDD4L-228ENST00000590248 CNKSR1Q969H4 720 aa17.91■□□□□ 0.46
NEDD4L-228ENST00000590248 NMRK2Q9NPI5 230 aa17.91■□□□□ 0.46
NEDD4L-228ENST00000590248 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
NEDD4L-228ENST00000590248 DICER1Q9UPY3 1922 aaKnown RBP17.9■□□□□ 0.46
NEDD4L-228ENST00000590248 ELL2O00472 640 aaPredicted RBP17.9■□□□□ 0.46
NEDD4L-228ENST00000590248 ZNF853P0CG23 659 aa17.9■□□□□ 0.46
NEDD4L-228ENST00000590248 ZNF428Q96B54 188 aa17.9■□□□□ 0.46
NEDD4L-228ENST00000590248 MRS2Q9HD23 443 aa17.9■□□□□ 0.46
NEDD4L-228ENST00000590248 ABCC12Q96J65 1359 aa17.9■□□□□ 0.46
NEDD4L-228ENST00000590248 KLRG2A4D1S0 409 aaPredicted RBP17.89■□□□□ 0.45
NEDD4L-228ENST00000590248 LMNB1P20700 586 aa17.89■□□□□ 0.45
NEDD4L-228ENST00000590248 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.45
NEDD4L-228ENST00000590248 DUSP27Q5VZP5 1158 aa17.89■□□□□ 0.45
NEDD4L-228ENST00000590248 DDX21Q9NR30 783 aaKnown RBP eCLIP17.89■□□□□ 0.45
NEDD4L-228ENST00000590248 ANKRD36CQ5JPF3 1778 aa17.89■□□□□ 0.45
NEDD4L-228ENST00000590248 NPR1P16066 1061 aa17.88■□□□□ 0.45
NEDD4L-228ENST00000590248 OLFM4Q6UX06 510 aa17.88■□□□□ 0.45
NEDD4L-228ENST00000590248 NYXQ9GZU5 481 aa17.88■□□□□ 0.45
NEDD4L-228ENST00000590248 TIAM2Q8IVF5 1701 aa17.87■□□□□ 0.45
NEDD4L-228ENST00000590248 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
NEDD4L-228ENST00000590248 NTSR2O95665 410 aa17.86■□□□□ 0.45
NEDD4L-228ENST00000590248 GNAI1P63096 354 aa17.86■□□□□ 0.45
NEDD4L-228ENST00000590248 C3orf67Q6ZVT6 689 aa17.86■□□□□ 0.45
NEDD4L-228ENST00000590248 C7orf43Q8WVR3 580 aa17.86■□□□□ 0.45
NEDD4L-228ENST00000590248 RRAGCQ9HB90 399 aa17.86■□□□□ 0.45
NEDD4L-228ENST00000590248 PPP1R42Q7Z4L9 355 aa17.85■□□□□ 0.45
NEDD4L-228ENST00000590248 C8orf58Q8NAV2 365 aa17.85■□□□□ 0.45
NEDD4L-228ENST00000590248 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
NEDD4L-228ENST00000590248 TAF1P21675 1872 aa17.84■□□□□ 0.45
NEDD4L-228ENST00000590248 HOXB7P09629 217 aa17.84■□□□□ 0.45
NEDD4L-228ENST00000590248 SYNE4Q8N205 404 aa17.84■□□□□ 0.45
NEDD4L-228ENST00000590248 TAOK3Q9H2K8 898 aa17.84■□□□□ 0.45
NEDD4L-228ENST00000590248 DBF4Q9UBU7 674 aaPredicted RBP17.84■□□□□ 0.45
NEDD4L-228ENST00000590248 LAMB2P55268 1798 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms