RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-222	ENST00000590208	DACT1	Q9NYF0	836 aa		18.77	■□□□□ 0.59
MBD1-222	ENST00000590208	SOS1	Q07889	1333 aa	Predicted RBP	18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	PTH1R	Q03431	593 aa		18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	COL9A3	Q14050	684 aa	Predicted RBP	18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	ME3	Q16798	604 aa		18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	MTHFSD	Q2M296	383 aa	Known RBP	18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	CCDC112	Q8NEF3	446 aa		18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	PDRG1	Q9NUG6	133 aa		18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
MBD1-222	ENST00000590208		V9GYY5	206 aa	Predicted RBP	18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	TPD52L1	Q16890	204 aa	Predicted RBP	18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	CDC37L1	Q7L3B6	337 aa		18.76	■□□□□ 0.59
MBD1-222	ENST00000590208	EPB41L2	O43491	1005 aa	Known RBP	18.75	■□□□□ 0.59
MBD1-222	ENST00000590208	CCDC144B	Q3MJ40	725 aa		18.75	■□□□□ 0.59
MBD1-222	ENST00000590208	PRPF40B	Q6NWY9	871 aa	Known RBP	18.75	■□□□□ 0.59
MBD1-222	ENST00000590208	CCDC144CP	Q8IYA2	1237 aa		18.75	■□□□□ 0.59
MBD1-222	ENST00000590208	TFIP11	Q9UBB9	837 aa	Known RBP	18.75	■□□□□ 0.59
MBD1-222	ENST00000590208	ZNF75D	P51815	510 aa		18.75	■□□□□ 0.59
MBD1-222	ENST00000590208	TNMD	Q9H2S6	317 aa		18.75	■□□□□ 0.59
MBD1-222	ENST00000590208	AOX1	Q06278	1338 aa		18.75	■□□□□ 0.59
MBD1-222	ENST00000590208	CEBPA	P49715	358 aa	Predicted RBP	18.74	■□□□□ 0.59
MBD1-222	ENST00000590208	PPP1R42	Q7Z4L9	355 aa		18.74	■□□□□ 0.59
MBD1-222	ENST00000590208	RHPN1	Q8TCX5	695 aa		18.74	■□□□□ 0.59
MBD1-222	ENST00000590208	UBTFL1	P0CB47	393 aa	Predicted RBP	18.74	■□□□□ 0.59
MBD1-222	ENST00000590208	LARP1B	Q659C4	914 aa	Known RBP	18.74	■□□□□ 0.59
MBD1-222	ENST00000590208	TXNDC2	Q86VQ3	553 aa		18.74	■□□□□ 0.59
MBD1-222	ENST00000590208	KIF18A	Q8NI77	898 aa		18.74	■□□□□ 0.59
MBD1-222	ENST00000590208	ARID5B	Q14865	1188 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	TMEM51	Q9NW97	253 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	PREX1	Q8TCU6	1659 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	USP27X	A6NNY8	438 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	KRT85	P78386	507 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	PLA2G4D	Q86XP0	818 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	SYCP1	Q15431	976 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	CNTROB	Q8N137	903 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	SSH3	Q8TE77	659 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	CCDC61	Q9Y6R9	512 aa		18.73	■□□□□ 0.59
MBD1-222	ENST00000590208	GABPB1	Q06547	395 aa	Predicted RBP	18.72	■□□□□ 0.59
MBD1-222	ENST00000590208	DNAJC25	Q9H1X3	360 aa		18.72	■□□□□ 0.59
MBD1-222	ENST00000590208	CLIP2	Q9UDT6	1046 aa		18.72	■□□□□ 0.59
MBD1-222	ENST00000590208	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.72	■□□□□ 0.59
MBD1-222	ENST00000590208	VPS53	Q5VIR6	699 aa		18.71	■□□□□ 0.59
MBD1-222	ENST00000590208	TPCN1	Q9ULQ1	816 aa		18.71	■□□□□ 0.59
MBD1-222	ENST00000590208	PAXBP1	Q9Y5B6	917 aa		18.71	■□□□□ 0.59
MBD1-222	ENST00000590208	MAP3K19	Q56UN5	1328 aa		18.71	■□□□□ 0.59
MBD1-222	ENST00000590208	KMT5B	Q4FZB7	885 aa		18.71	■□□□□ 0.59
MBD1-222	ENST00000590208	TCEANC2	Q96MN5	208 aa		18.71	■□□□□ 0.59
MBD1-222	ENST00000590208	CYP46A1	Q9Y6A2	500 aa		18.71	■□□□□ 0.59
MBD1-222	ENST00000590208	CEP135	Q66GS9	1140 aa		18.7	■□□□□ 0.58
MBD1-222	ENST00000590208	ZNF215	Q9UL58	517 aa	Predicted RBP	18.7	■□□□□ 0.58
MBD1-222	ENST00000590208	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	18.7	■□□□□ 0.58
MBD1-222	ENST00000590208	SRGAP3	O43295	1099 aa		18.7	■□□□□ 0.58
MBD1-222	ENST00000590208	ZNF165	P49910	485 aa		18.7	■□□□□ 0.58
MBD1-222	ENST00000590208	GOLGA6L4	A6NEF3	574 aa		18.7	■□□□□ 0.58
MBD1-222	ENST00000590208	TERF2	Q15554	542 aa		18.7	■□□□□ 0.58
MBD1-222	ENST00000590208	CCDC30	Q5VVM6	783 aa		18.7	■□□□□ 0.58
MBD1-222	ENST00000590208	ZSWIM6	Q9HCJ5	1215 aa		18.7	■□□□□ 0.58
MBD1-222	ENST00000590208	NUTM2F	A1L443	756 aa		18.69	■□□□□ 0.58
MBD1-222	ENST00000590208	NR1I2	O75469	434 aa		18.69	■□□□□ 0.58
MBD1-222	ENST00000590208	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.69	■□□□□ 0.58
MBD1-222	ENST00000590208	KLHL34	Q8N239	644 aa		18.69	■□□□□ 0.58
MBD1-222	ENST00000590208	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.69	■□□□□ 0.58
MBD1-222	ENST00000590208	ST7	Q9NRC1	585 aa		18.69	■□□□□ 0.58
MBD1-222	ENST00000590208	TAF3	Q5VWG9	929 aa		18.68	■□□□□ 0.58
MBD1-222	ENST00000590208	TDRD7	Q8NHU6	1098 aa	Known RBP	18.68	■□□□□ 0.58
MBD1-222	ENST00000590208	SPATA32	Q96LK8	384 aa		18.68	■□□□□ 0.58
MBD1-222	ENST00000590208	PHAX	Q9H814	394 aa	Known RBP	18.68	■□□□□ 0.58
MBD1-222	ENST00000590208	NPHP1	O15259	732 aa		18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	RAB11FIP3	O75154	756 aa		18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	DLC1	Q96QB1	1528 aa		18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	PRR36	Q9H6K5	1346 aa		18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	KIF1BP	Q96EK5	621 aa		18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	TRMT1	Q9NXH9	659 aa	Known RBP	18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	ARHGEF10	O15013	1369 aa		18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	TTC21A	Q8NDW8	1320 aa		18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	KRT222	Q8N1A0	295 aa		18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	ESF1	Q9H501	851 aa	Known RBP	18.67	■□□□□ 0.58
MBD1-222	ENST00000590208	RIMS1	Q86UR5	1692 aa	Known RBP	18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	ELP1	O95163	1332 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	ERICH4	A6NGS2	130 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	VGLL3	A8MV65	326 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	KCNJ4	P48050	445 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	POLA2	Q14181	598 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	LEO1	Q8WVC0	666 aa	Predicted RBP	18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	CLSTN2	Q9H4D0	955 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	ELF2	Q15723	593 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	FBXO38	Q6PIJ6	1188 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	LARP1	Q6PKG0	1096 aa	Known RBP	18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	LRRC8A	Q8IWT6	810 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	PGBD1	Q96JS3	809 aa		18.66	■□□□□ 0.58
MBD1-222	ENST00000590208	BICD2	Q8TD16	824 aa		18.65	■□□□□ 0.58
MBD1-222	ENST00000590208	NRK	Q7Z2Y5	1582 aa		18.65	■□□□□ 0.58
MBD1-222	ENST00000590208		A0A087WWV3	80 aa		18.65	■□□□□ 0.58
MBD1-222	ENST00000590208	ZNF397	Q8NF99	534 aa	Predicted RBP	18.65	■□□□□ 0.58
MBD1-222	ENST00000590208	XRN1	Q8IZH2	1706 aa	Known RBP	18.64	■□□□□ 0.58
MBD1-222	ENST00000590208	RBM6	P78332	1123 aa	Known RBP	18.64	■□□□□ 0.58
MBD1-222	ENST00000590208	STK3	Q13188	491 aa		18.64	■□□□□ 0.58
MBD1-222	ENST00000590208	NECTIN1	Q15223	517 aa		18.64	■□□□□ 0.58

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