RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 RAPGEF4Q8WZA2 1011 aa13.37□□□□□ -0.27
GFAP-216ENST00000589701 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
GFAP-216ENST00000589701 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
GFAP-216ENST00000589701 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
GFAP-216ENST00000589701 CPA1P15085 419 aa13.37□□□□□ -0.27
GFAP-216ENST00000589701 CWC27Q6UX04 472 aaKnown RBP13.37□□□□□ -0.27
GFAP-216ENST00000589701 OSBPL3Q9H4L5 887 aa13.37□□□□□ -0.27
GFAP-216ENST00000589701 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
GFAP-216ENST00000589701 TEX2Q8IWB9 1127 aa13.36□□□□□ -0.27
GFAP-216ENST00000589701 ZNF496Q96IT1 587 aaPredicted RBP13.36□□□□□ -0.27
GFAP-216ENST00000589701 PDCL3Q9H2J4 239 aa13.36□□□□□ -0.27
GFAP-216ENST00000589701 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
GFAP-216ENST00000589701 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
GFAP-216ENST00000589701 MCTP1Q6DN14 999 aa13.36□□□□□ -0.27
GFAP-216ENST00000589701 GAS2L3Q86XJ1 694 aa13.36□□□□□ -0.27
GFAP-216ENST00000589701 TMEM51Q9NW97 253 aa13.36□□□□□ -0.27
GFAP-216ENST00000589701 LRP6O75581 1613 aa13.36□□□□□ -0.27
GFAP-216ENST00000589701 CHRM1P11229 460 aaPredicted RBP13.36□□□□□ -0.27
GFAP-216ENST00000589701 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
GFAP-216ENST00000589701 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
GFAP-216ENST00000589701 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
GFAP-216ENST00000589701 NDUFB9Q9Y6M9 179 aa13.35□□□□□ -0.27
GFAP-216ENST00000589701 PDIA6Q15084 440 aa13.35□□□□□ -0.27
GFAP-216ENST00000589701 ZNF790Q6PG37 636 aa13.35□□□□□ -0.27
GFAP-216ENST00000589701 KAZALD1Q96I82 304 aa13.35□□□□□ -0.27
GFAP-216ENST00000589701 SUCLG2Q96I99 432 aa13.35□□□□□ -0.27
GFAP-216ENST00000589701 BICC1Q9H694 974 aaKnown RBP13.35□□□□□ -0.27
GFAP-216ENST00000589701 CACNA1FO60840 1977 aa13.34□□□□□ -0.27
GFAP-216ENST00000589701 GOLGA6L3A6NEY3 463 aa13.34□□□□□ -0.27
GFAP-216ENST00000589701 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
GFAP-216ENST00000589701 CYP27B1O15528 508 aa13.34□□□□□ -0.27
GFAP-216ENST00000589701 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
GFAP-216ENST00000589701 POLA2Q14181 598 aa13.34□□□□□ -0.27
GFAP-216ENST00000589701 CCDC8Q9H0W5 538 aaPredicted RBP13.34□□□□□ -0.27
GFAP-216ENST00000589701 TLR7Q9NYK1 1049 aaKnown RBP13.34□□□□□ -0.27
GFAP-216ENST00000589701 ST18O60284 1047 aa13.34□□□□□ -0.27
GFAP-216ENST00000589701 COL9A3Q14050 684 aaPredicted RBP13.34□□□□□ -0.27
GFAP-216ENST00000589701 COPS6Q7L5N1 327 aa13.34□□□□□ -0.27
GFAP-216ENST00000589701 KAT6BQ8WYB5 2073 aa13.33□□□□□ -0.27
GFAP-216ENST00000589701 BAG4O95429 457 aaKnown RBP13.33□□□□□ -0.28
GFAP-216ENST00000589701 CHGBP05060 677 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 IGKV5-2P06315 115 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 EPHA10Q5JZY3 1008 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 KSR2Q6VAB6 950 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 RIC3Q7Z5B4 369 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 XAGE3Q8WTP9 111 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 ZDHHC9Q9Y397 364 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 MEGF6O75095 1541 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 GOLGB1Q14789 3259 aaKnown RBP13.33□□□□□ -0.28
GFAP-216ENST00000589701 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.28
GFAP-216ENST00000589701 EDC3Q96F86 508 aaKnown RBP13.32□□□□□ -0.28
GFAP-216ENST00000589701 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
GFAP-216ENST00000589701 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
GFAP-216ENST00000589701 KDM6AO15550 1401 aaPredicted RBP13.32□□□□□ -0.28
GFAP-216ENST00000589701 PHKG2P15735 406 aa13.32□□□□□ -0.28
GFAP-216ENST00000589701 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
GFAP-216ENST00000589701 KIF1BPQ96EK5 621 aa13.32□□□□□ -0.28
GFAP-216ENST00000589701 MYD88Q99836 296 aa13.32□□□□□ -0.28
GFAP-216ENST00000589701 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
GFAP-216ENST00000589701 STAP2Q9UGK3 403 aa13.32□□□□□ -0.28
GFAP-216ENST00000589701 TRPM3Q9HCF6 1732 aaPredicted RBP13.31□□□□□ -0.28
GFAP-216ENST00000589701 AACSQ86V21 672 aa13.31□□□□□ -0.28
GFAP-216ENST00000589701 KCNG1Q9UIX4 513 aa13.31□□□□□ -0.28
GFAP-216ENST00000589701 GRM8O00222 908 aa13.3□□□□□ -0.28
GFAP-216ENST00000589701 TATP17735 454 aaPredicted RBP13.3□□□□□ -0.28
GFAP-216ENST00000589701 ZNF330Q9Y3S2 320 aaPredicted RBP13.3□□□□□ -0.28
GFAP-216ENST00000589701 DDX49Q9Y6V7 483 aaKnown RBP13.3□□□□□ -0.28
GFAP-216ENST00000589701 SLIT3O75094 1523 aa13.3□□□□□ -0.28
GFAP-216ENST00000589701 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
GFAP-216ENST00000589701 NUTM2EB1AL46 878 aaPredicted RBP13.3□□□□□ -0.28
GFAP-216ENST00000589701 PRPF40AO75400 957 aaKnown RBP13.3□□□□□ -0.28
GFAP-216ENST00000589701 NUTM2AQ8IVF1 878 aaPredicted RBP13.3□□□□□ -0.28
GFAP-216ENST00000589701 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
GFAP-216ENST00000589701 RBM27Q9P2N5 1060 aaKnown RBP13.3□□□□□ -0.28
GFAP-216ENST00000589701 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
GFAP-216ENST00000589701 LMO7Q8WWI1 1683 aa13.29□□□□□ -0.28
GFAP-216ENST00000589701 SASH1O94885 1247 aa13.29□□□□□ -0.28
GFAP-216ENST00000589701 EAF2Q96CJ1 260 aaPredicted RBP13.29□□□□□ -0.28
GFAP-216ENST00000589701 STRN4Q9NRL3 753 aa13.29□□□□□ -0.28
GFAP-216ENST00000589701 NSFL1CQ9UNZ2 370 aaKnown RBP13.29□□□□□ -0.28
GFAP-216ENST00000589701 FSD2A1L4K1 749 aa13.29□□□□□ -0.28
GFAP-216ENST00000589701 PTH1RQ03431 593 aa13.29□□□□□ -0.28
GFAP-216ENST00000589701 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
GFAP-216ENST00000589701 DDX21Q9NR30 783 aaKnown RBP eCLIP13.29□□□□□ -0.28
GFAP-216ENST00000589701 HOXB7P09629 217 aa13.28□□□□□ -0.28
GFAP-216ENST00000589701 CAVIN1Q6NZI2 390 aaKnown RBP13.28□□□□□ -0.28
GFAP-216ENST00000589701 UBE3BQ7Z3V4 1068 aa13.28□□□□□ -0.28
GFAP-216ENST00000589701 CLASRPQ8N2M8 674 aaKnown RBP13.28□□□□□ -0.28
GFAP-216ENST00000589701 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
GFAP-216ENST00000589701 TUBGCP6Q96RT7 1819 aa13.28□□□□□ -0.28
GFAP-216ENST00000589701 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
GFAP-216ENST00000589701 TCEANC2Q96MN5 208 aa13.28□□□□□ -0.28
GFAP-216ENST00000589701 HYPKQ9NX55 129 aa13.28□□□□□ -0.28
GFAP-216ENST00000589701 PHRF1Q9P1Y6 1649 aaKnown RBP13.28□□□□□ -0.28
GFAP-216ENST00000589701 RAB11FIP3O75154 756 aa13.27□□□□□ -0.28
GFAP-216ENST00000589701 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.28
GFAP-216ENST00000589701 CLCN1P35523 988 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms