RNA–Protein interactions for RNA: ENST00000589648.1

CHAF1A-207, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-207ENST00000589648 SLX4Q8IY92 1834 aa20■□□□□ 0.79
CHAF1A-207ENST00000589648 CC2D1BQ5T0F9 858 aaKnown RBP20■□□□□ 0.79
CHAF1A-207ENST00000589648 NPM2Q86SE8 214 aaKnown RBP20■□□□□ 0.79
CHAF1A-207ENST00000589648 LDHDQ86WU2 507 aa20■□□□□ 0.79
CHAF1A-207ENST00000589648 IQCA1LA6NCM1 817 aa19.99■□□□□ 0.79
CHAF1A-207ENST00000589648 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
CHAF1A-207ENST00000589648 DZIP3Q86Y13 1208 aaKnown RBP19.99■□□□□ 0.79
CHAF1A-207ENST00000589648 GAS2L2Q8NHY3 880 aa19.99■□□□□ 0.79
CHAF1A-207ENST00000589648 C7orf43Q8WVR3 580 aa19.99■□□□□ 0.79
CHAF1A-207ENST00000589648 L3MBTL3Q96JM7 780 aaPredicted RBP19.99■□□□□ 0.79
CHAF1A-207ENST00000589648 TAF1DQ9H5J8 278 aaPredicted RBP19.99■□□□□ 0.79
CHAF1A-207ENST00000589648 KIF7Q2M1P5 1343 aa19.99■□□□□ 0.79
CHAF1A-207ENST00000589648 U2SURPO15042 1029 aaKnown RBP19.98■□□□□ 0.79
CHAF1A-207ENST00000589648 KCNQ3O43525 872 aa19.98■□□□□ 0.79
CHAF1A-207ENST00000589648 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
CHAF1A-207ENST00000589648 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
CHAF1A-207ENST00000589648 CEMIPQ8WUJ3 1361 aa19.96■□□□□ 0.79
CHAF1A-207ENST00000589648 ITGBL1O95965 494 aaPredicted RBP19.96■□□□□ 0.79
CHAF1A-207ENST00000589648 VEGFBP49765 207 aa19.96■□□□□ 0.79
CHAF1A-207ENST00000589648 CCDC93Q567U6 631 aa19.96■□□□□ 0.79
CHAF1A-207ENST00000589648 NBPF5PQ86XG9 351 aaPredicted RBP19.96■□□□□ 0.79
CHAF1A-207ENST00000589648 PRDM10Q9NQV6 1147 aa19.96■□□□□ 0.79
CHAF1A-207ENST00000589648 SIPA1L3O60292 1781 aaPredicted RBP19.95■□□□□ 0.78
CHAF1A-207ENST00000589648 TMEM88BA6NKF7 163 aa19.95■□□□□ 0.78
CHAF1A-207ENST00000589648 BTBD11A6QL63 1104 aa19.95■□□□□ 0.78
CHAF1A-207ENST00000589648 ZNF277Q9NRM2 450 aaPredicted RBP19.95■□□□□ 0.78
CHAF1A-207ENST00000589648 USP16Q9Y5T5 823 aa19.95■□□□□ 0.78
CHAF1A-207ENST00000589648 ZNF541Q9H0D2 1346 aa19.95■□□□□ 0.78
CHAF1A-207ENST00000589648 NPR1P16066 1061 aa19.94■□□□□ 0.78
CHAF1A-207ENST00000589648 FKBP4Q02790 459 aaKnown RBP eCLIP19.94■□□□□ 0.78
CHAF1A-207ENST00000589648 EAPPQ56P03 285 aaPredicted RBP19.94■□□□□ 0.78
CHAF1A-207ENST00000589648 CLEC4GQ6UXB4 293 aa19.94■□□□□ 0.78
CHAF1A-207ENST00000589648 AIDAQ96BJ3 306 aa19.94■□□□□ 0.78
CHAF1A-207ENST00000589648 BCORQ6W2J9 1755 aa19.93■□□□□ 0.78
CHAF1A-207ENST00000589648 ARFGEF2Q9Y6D5 1785 aa19.93■□□□□ 0.78
CHAF1A-207ENST00000589648 CACNA1SQ13698 1873 aa19.93■□□□□ 0.78
CHAF1A-207ENST00000589648 PRAMEF22A3QJZ6 481 aa19.93■□□□□ 0.78
CHAF1A-207ENST00000589648 CTCFP49711 727 aaPredicted RBP19.93■□□□□ 0.78
CHAF1A-207ENST00000589648 OLFM4Q6UX06 510 aa19.93■□□□□ 0.78
CHAF1A-207ENST00000589648 KLRG2A4D1S0 409 aaPredicted RBP19.92■□□□□ 0.78
CHAF1A-207ENST00000589648 PHACTR3Q96KR7 559 aa19.92■□□□□ 0.78
CHAF1A-207ENST00000589648 HACL1Q9UJ83 578 aa19.92■□□□□ 0.78
CHAF1A-207ENST00000589648 SCN4AP35499 1836 aa19.91■□□□□ 0.78
CHAF1A-207ENST00000589648 EPHX2P34913 555 aa19.91■□□□□ 0.78
CHAF1A-207ENST00000589648 CNGB1Q14028 1251 aaPredicted RBP19.91■□□□□ 0.78
CHAF1A-207ENST00000589648 WBP1LQ9NX94 342 aa19.91■□□□□ 0.78
CHAF1A-207ENST00000589648 CLEC11AQ9Y240 323 aa19.91■□□□□ 0.78
CHAF1A-207ENST00000589648 ZNF652Q9Y2D9 606 aa19.91■□□□□ 0.78
CHAF1A-207ENST00000589648 TPTE2Q6XPS3 522 aa19.9■□□□□ 0.78
CHAF1A-207ENST00000589648 LBX1P52954 281 aa19.89■□□□□ 0.77
CHAF1A-207ENST00000589648 RTKN2Q8IZC4 609 aa19.89■□□□□ 0.77
CHAF1A-207ENST00000589648 NIP7Q9Y221 180 aaKnown RBP eCLIP19.89■□□□□ 0.77
CHAF1A-207ENST00000589648 RNF123Q5XPI4 1314 aa19.88■□□□□ 0.77
CHAF1A-207ENST00000589648 SNRPA1P09661 255 aaKnown RBP19.88■□□□□ 0.77
CHAF1A-207ENST00000589648 PRKAR2BP31323 418 aa19.88■□□□□ 0.77
CHAF1A-207ENST00000589648 PNMA8AQ86V59 439 aaPredicted RBP19.88■□□□□ 0.77
CHAF1A-207ENST00000589648 CNTROBQ8N137 903 aa19.88■□□□□ 0.77
CHAF1A-207ENST00000589648 ADAMTSL1Q8N6G6 1762 aa19.88■□□□□ 0.77
CHAF1A-207ENST00000589648 RASSF10A6NK89 507 aa19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 FAM177BA6PVY3 158 aa19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 NBPF26B4DH59 902 aa19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 FZD9O00144 591 aa19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 IARSP41252 1262 aaKnown RBP19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 MAP1SQ66K74 1059 aaPredicted RBP19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 NBPF10Q6P3W6 841 aaKnown RBP19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 SYNE4Q8N205 404 aa19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 NBPF15Q8N660 670 aa19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 RSPH6AQ9H0K4 717 aa19.87■□□□□ 0.77
CHAF1A-207ENST00000589648 NPC1L1Q9UHC9 1359 aa19.86■□□□□ 0.77
CHAF1A-207ENST00000589648 DEFB115Q30KQ5 88 aa19.86■□□□□ 0.77
CHAF1A-207ENST00000589648 RGL2O15211 777 aa19.85■□□□□ 0.77
CHAF1A-207ENST00000589648 ALDH1B1P30837 517 aa19.85■□□□□ 0.77
CHAF1A-207ENST00000589648 MCM10Q7L590 875 aa19.85■□□□□ 0.77
CHAF1A-207ENST00000589648 GPC2Q8N158 579 aa19.85■□□□□ 0.77
CHAF1A-207ENST00000589648 HSPA8P11142 646 aaKnown RBP19.84■□□□□ 0.77
CHAF1A-207ENST00000589648 HLFQ16534 295 aa19.84■□□□□ 0.77
CHAF1A-207ENST00000589648 WDR33Q9C0J8 1336 aaKnown RBP19.83■□□□□ 0.77
CHAF1A-207ENST00000589648 RTF1Q92541 710 aaKnown RBP19.83■□□□□ 0.77
CHAF1A-207ENST00000589648 ABT1Q9ULW3 272 aaKnown RBP19.83■□□□□ 0.77
CHAF1A-207ENST00000589648 SNED1Q8TER0 1413 aa19.83■□□□□ 0.76
CHAF1A-207ENST00000589648 GTF2E1P29083 439 aaPredicted RBP19.82■□□□□ 0.76
CHAF1A-207ENST00000589648 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
CHAF1A-207ENST00000589648 PSMD1Q99460 953 aa19.82■□□□□ 0.76
CHAF1A-207ENST00000589648 MAP2K1Q02750 393 aaPredicted RBP19.81■□□□□ 0.76
CHAF1A-207ENST00000589648 DCTN1Q14203 1278 aa19.81■□□□□ 0.76
CHAF1A-207ENST00000589648 CRY2Q49AN0 593 aa19.81■□□□□ 0.76
CHAF1A-207ENST00000589648 JDP2Q8WYK2 163 aa19.81■□□□□ 0.76
CHAF1A-207ENST00000589648 ABHD8Q96I13 439 aa19.81■□□□□ 0.76
CHAF1A-207ENST00000589648 CFAP53Q96M91 514 aa19.8■□□□□ 0.76
CHAF1A-207ENST00000589648 DDX21Q9NR30 783 aaKnown RBP eCLIP19.8■□□□□ 0.76
CHAF1A-207ENST00000589648 GJA3Q9Y6H8 435 aa19.8■□□□□ 0.76
CHAF1A-207ENST00000589648 COL4A5P29400 1685 aa19.8■□□□□ 0.76
CHAF1A-207ENST00000589648 ABCC12Q96J65 1359 aa19.8■□□□□ 0.76
CHAF1A-207ENST00000589648 NUTM1Q86Y26 1132 aa19.79■□□□□ 0.76
CHAF1A-207ENST00000589648 EIF6P56537 245 aaKnown RBP19.78■□□□□ 0.76
CHAF1A-207ENST00000589648 FMR1Q06787 632 aaKnown RBP eCLIP19.78■□□□□ 0.76
CHAF1A-207ENST00000589648 U2AF1L5P0DN76 240 aaPredicted RBP19.77■□□□□ 0.76
CHAF1A-207ENST00000589648 LMOD1P29536 600 aaPredicted RBP19.77■□□□□ 0.76
CHAF1A-207ENST00000589648 EPS15P42566 896 aa19.77■□□□□ 0.76
CHAF1A-207ENST00000589648 U2AF1Q01081 240 aaKnown RBP eCLIP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms