RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 TRPM7Q96QT4 1865 aa13.2□□□□□ -0.3
TREM1-204ENST00000589614 SLX4Q8IY92 1834 aa13.19□□□□□ -0.3
TREM1-204ENST00000589614 EAPPQ56P03 285 aaPredicted RBP13.19□□□□□ -0.3
TREM1-204ENST00000589614 CNTROBQ8N137 903 aa13.19□□□□□ -0.3
TREM1-204ENST00000589614 HACL1Q9UJ83 578 aa13.19□□□□□ -0.3
TREM1-204ENST00000589614 ABT1Q9ULW3 272 aaKnown RBP13.19□□□□□ -0.3
TREM1-204ENST00000589614 CA12O43570 354 aa13.18□□□□□ -0.3
TREM1-204ENST00000589614 PDE6BP35913 854 aa13.18□□□□□ -0.3
TREM1-204ENST00000589614 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
TREM1-204ENST00000589614 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
TREM1-204ENST00000589614 CAPNS2Q96L46 248 aa13.18□□□□□ -0.3
TREM1-204ENST00000589614 GPR101Q96P66 508 aaPredicted RBP13.18□□□□□ -0.3
TREM1-204ENST00000589614 SIN3AQ96ST3 1273 aa13.18□□□□□ -0.3
TREM1-204ENST00000589614 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
TREM1-204ENST00000589614 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
TREM1-204ENST00000589614 COL15A1P39059 1388 aa13.18□□□□□ -0.3
TREM1-204ENST00000589614 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
TREM1-204ENST00000589614 EPHX2P34913 555 aa13.17□□□□□ -0.3
TREM1-204ENST00000589614 MAP2K2P36507 400 aa13.17□□□□□ -0.3
TREM1-204ENST00000589614 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.3
TREM1-204ENST00000589614 BRIP1Q9BX63 1249 aa13.17□□□□□ -0.3
TREM1-204ENST00000589614 SCN11AQ9UI33 1791 aa13.17□□□□□ -0.3
TREM1-204ENST00000589614 MAP1SQ66K74 1059 aaPredicted RBP13.16□□□□□ -0.3
TREM1-204ENST00000589614 PAXIP1Q6ZW49 1069 aaPredicted RBP13.16□□□□□ -0.3
TREM1-204ENST00000589614 NFATC2IPQ8NCF5 419 aa13.16□□□□□ -0.3
TREM1-204ENST00000589614 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
TREM1-204ENST00000589614 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
TREM1-204ENST00000589614 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
TREM1-204ENST00000589614 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
TREM1-204ENST00000589614 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
TREM1-204ENST00000589614 MTHFSP49914 203 aa13.14□□□□□ -0.31
TREM1-204ENST00000589614 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
TREM1-204ENST00000589614 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
TREM1-204ENST00000589614 DGKZQ13574 1117 aa13.13□□□□□ -0.31
TREM1-204ENST00000589614 CYP4F22Q6NT55 531 aa13.13□□□□□ -0.31
TREM1-204ENST00000589614 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
TREM1-204ENST00000589614 TSKSQ9UJT2 592 aa13.13□□□□□ -0.31
TREM1-204ENST00000589614 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
TREM1-204ENST00000589614 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
TREM1-204ENST00000589614 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
TREM1-204ENST00000589614 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
TREM1-204ENST00000589614 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
TREM1-204ENST00000589614 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
TREM1-204ENST00000589614 ZNF541Q9H0D2 1346 aa13.12□□□□□ -0.31
TREM1-204ENST00000589614 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
TREM1-204ENST00000589614 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
TREM1-204ENST00000589614 TLL2Q9Y6L7 1015 aa13.11□□□□□ -0.31
TREM1-204ENST00000589614 SCN7AQ01118 1682 aa13.11□□□□□ -0.31
TREM1-204ENST00000589614 RNF123Q5XPI4 1314 aa13.11□□□□□ -0.31
TREM1-204ENST00000589614 SRGNP10124 158 aa13.1□□□□□ -0.31
TREM1-204ENST00000589614 BRPF1P55201 1214 aaPredicted RBP13.1□□□□□ -0.31
TREM1-204ENST00000589614 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
TREM1-204ENST00000589614 GPC2Q8N158 579 aa13.1□□□□□ -0.31
TREM1-204ENST00000589614 C7orf43Q8WVR3 580 aa13.1□□□□□ -0.31
TREM1-204ENST00000589614 FZD9O00144 591 aa13.09□□□□□ -0.31
TREM1-204ENST00000589614 FKBP4Q02790 459 aaKnown RBP eCLIP13.09□□□□□ -0.31
TREM1-204ENST00000589614 GRM1Q13255 1194 aa13.09□□□□□ -0.31
TREM1-204ENST00000589614 BICDL1Q6ZP65 573 aa13.09□□□□□ -0.31
TREM1-204ENST00000589614 MASTLQ96GX5 879 aa13.09□□□□□ -0.31
TREM1-204ENST00000589614 HHIPL1Q96JK4 782 aa13.09□□□□□ -0.31
TREM1-204ENST00000589614 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
TREM1-204ENST00000589614 A0A087WZG4 1122 aa13.08□□□□□ -0.32
TREM1-204ENST00000589614 AOC2O75106 756 aa13.08□□□□□ -0.32
TREM1-204ENST00000589614 CST9Q5W186 159 aa13.08□□□□□ -0.32
TREM1-204ENST00000589614 TBC1D9BQ66K14 1250 aa13.08□□□□□ -0.32
TREM1-204ENST00000589614 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
TREM1-204ENST00000589614 UBR2Q8IWV8 1755 aa13.07□□□□□ -0.32
TREM1-204ENST00000589614 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
TREM1-204ENST00000589614 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
TREM1-204ENST00000589614 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
TREM1-204ENST00000589614 MRC1P22897 1456 aa13.06□□□□□ -0.32
TREM1-204ENST00000589614 SOX10P56693 466 aa13.06□□□□□ -0.32
TREM1-204ENST00000589614 CDCA8Q53HL2 280 aa13.06□□□□□ -0.32
TREM1-204ENST00000589614 SAPCD2Q86UD0 394 aa13.06□□□□□ -0.32
TREM1-204ENST00000589614 CNBD1Q8NA66 436 aa13.06□□□□□ -0.32
TREM1-204ENST00000589614 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
TREM1-204ENST00000589614 SLC52A2Q9HAB3 445 aa13.06□□□□□ -0.32
TREM1-204ENST00000589614 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
TREM1-204ENST00000589614 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
TREM1-204ENST00000589614 ST5P78524 1137 aa13.05□□□□□ -0.32
TREM1-204ENST00000589614 FMR1Q06787 632 aaKnown RBP eCLIP13.05□□□□□ -0.32
TREM1-204ENST00000589614 RTKN2Q8IZC4 609 aa13.05□□□□□ -0.32
TREM1-204ENST00000589614 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
TREM1-204ENST00000589614 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
TREM1-204ENST00000589614 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
TREM1-204ENST00000589614 CANXP27824 592 aaKnown RBP13.04□□□□□ -0.32
TREM1-204ENST00000589614 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
TREM1-204ENST00000589614 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
TREM1-204ENST00000589614 USP50Q70EL3 339 aaPredicted RBP13.04□□□□□ -0.32
TREM1-204ENST00000589614 SETDB2Q96T68 719 aa13.03□□□□□ -0.32
TREM1-204ENST00000589614 MKI67P46013 3256 aaKnown RBP13.02□□□□□ -0.32
TREM1-204ENST00000589614 TRAF5O00463 557 aa13.02□□□□□ -0.33
TREM1-204ENST00000589614 NPHP1O15259 732 aa13.02□□□□□ -0.33
TREM1-204ENST00000589614 STARD3NLO95772 234 aa13.02□□□□□ -0.33
TREM1-204ENST00000589614 NPR1P16066 1061 aa13.02□□□□□ -0.33
TREM1-204ENST00000589614 NOGQ13253 232 aa13.02□□□□□ -0.33
TREM1-204ENST00000589614 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
TREM1-204ENST00000589614 CIAPIN1Q6FI81 312 aa13.02□□□□□ -0.33
TREM1-204ENST00000589614 JDP2Q8WYK2 163 aa13.02□□□□□ -0.33
TREM1-204ENST00000589614 AKAP11Q9UKA4 1901 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms