RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 CLEC4GQ6UXB4 293 aa31.55■■■□□ 2.64
LSM7-205ENST00000589532 NPM2Q86SE8 214 aaKnown RBP31.55■■■□□ 2.64
LSM7-205ENST00000589532 RBM46Q8TBY0 533 aaKnown RBP31.55■■■□□ 2.64
LSM7-205ENST00000589532 MIS18AQ9NYP9 233 aa31.53■■■□□ 2.64
LSM7-205ENST00000589532 NFE2L2Q16236 605 aa31.52■■■□□ 2.64
LSM7-205ENST00000589532 SRGNP10124 158 aa31.5■■■□□ 2.63
LSM7-205ENST00000589532 ST5P78524 1137 aa31.5■■■□□ 2.63
LSM7-205ENST00000589532 ZNF622Q969S3 477 aaKnown RBP eCLIP31.5■■■□□ 2.63
LSM7-205ENST00000589532 ZNF652Q9Y2D9 606 aa31.5■■■□□ 2.63
LSM7-205ENST00000589532 APLP1P51693 650 aa31.49■■■□□ 2.63
LSM7-205ENST00000589532 STYK1Q6J9G0 422 aa31.48■■■□□ 2.63
LSM7-205ENST00000589532 PNISRQ8TF01 805 aaKnown RBP31.48■■■□□ 2.63
LSM7-205ENST00000589532 THUMPD2Q9BTF0 503 aaKnown RBP31.48■■■□□ 2.63
LSM7-205ENST00000589532 LTBP3Q9NS15 1303 aa31.48■■■□□ 2.63
LSM7-205ENST00000589532 C21orf2O43822 256 aa31.47■■■□□ 2.63
LSM7-205ENST00000589532 NEFMP07197 916 aa31.47■■■□□ 2.63
LSM7-205ENST00000589532 EIF4A1P60842 406 aaKnown RBP31.47■■■□□ 2.63
LSM7-205ENST00000589532 RRAGCQ9HB90 399 aa31.47■■■□□ 2.63
LSM7-205ENST00000589532 KLRG2A4D1S0 409 aaPredicted RBP31.46■■■□□ 2.63
LSM7-205ENST00000589532 GLTPD2A6NH11 291 aa31.46■■■□□ 2.63
LSM7-205ENST00000589532 NUP98P52948 1817 aa31.46■■■□□ 2.63
LSM7-205ENST00000589532 PRPF40BQ6NWY9 871 aaKnown RBP31.45■■■□□ 2.63
LSM7-205ENST00000589532 NBPF5PQ86XG9 351 aaPredicted RBP31.45■■■□□ 2.63
LSM7-205ENST00000589532 FSTL1Q12841 308 aa31.44■■■□□ 2.62
LSM7-205ENST00000589532 HLFQ16534 295 aa31.44■■■□□ 2.62
LSM7-205ENST00000589532 CNKSR1Q969H4 720 aa31.44■■■□□ 2.62
LSM7-205ENST00000589532 MASTLQ96GX5 879 aa31.44■■■□□ 2.62
LSM7-205ENST00000589532 C16orf71Q8IYS4 520 aaPredicted RBP31.43■■■□□ 2.62
LSM7-205ENST00000589532 NIP7Q9Y221 180 aaKnown RBP eCLIP31.43■■■□□ 2.62
LSM7-205ENST00000589532 MAPK8IP3Q9UPT6 1336 aa31.43■■■□□ 2.62
LSM7-205ENST00000589532 RALBP1Q15311 655 aa31.42■■■□□ 2.62
LSM7-205ENST00000589532 DNAJC5GQ8N7S2 189 aa31.42■■■□□ 2.62
LSM7-205ENST00000589532 NPHP1O15259 732 aa31.41■■■□□ 2.62
LSM7-205ENST00000589532 C7orf43Q8WVR3 580 aa31.41■■■□□ 2.62
LSM7-205ENST00000589532 ZNF219Q9P2Y4 722 aaPredicted RBP31.41■■■□□ 2.62
LSM7-205ENST00000589532 PNNQ9H307 717 aaKnown RBP31.4■■■□□ 2.62
LSM7-205ENST00000589532 TAOK3Q9H2K8 898 aa31.39■■■□□ 2.62
LSM7-205ENST00000589532 ABCC12Q96J65 1359 aa31.39■■■□□ 2.62
LSM7-205ENST00000589532 RIC1Q4ADV7 1423 aa31.38■■■□□ 2.61
LSM7-205ENST00000589532 ZNF316A6NFI3 1004 aaPredicted RBP31.37■■■□□ 2.61
LSM7-205ENST00000589532 POTECB2RU33 542 aa31.37■■■□□ 2.61
LSM7-205ENST00000589532 SNED1Q8TER0 1413 aa31.37■■■□□ 2.61
LSM7-205ENST00000589532 IBTKQ9P2D0 1353 aaPredicted RBP31.36■■■□□ 2.61
LSM7-205ENST00000589532 MAP3K15Q6ZN16 1313 aa31.36■■■□□ 2.61
LSM7-205ENST00000589532 ERVV-1B6SEH8 477 aa31.36■■■□□ 2.61
LSM7-205ENST00000589532 NPR1P16066 1061 aa31.36■■■□□ 2.61
LSM7-205ENST00000589532 TPTE2Q6XPS3 522 aa31.36■■■□□ 2.61
LSM7-205ENST00000589532 PCNTO95613 3336 aa31.36■■■□□ 2.61
LSM7-205ENST00000589532 ERBB4Q15303 1308 aa31.35■■■□□ 2.61
LSM7-205ENST00000589532 VEGFAP15692 232 aaPredicted RBP31.35■■■□□ 2.61
LSM7-205ENST00000589532 SOGA3Q5TF21 947 aa31.35■■■□□ 2.61
LSM7-205ENST00000589532 TTLL7Q6ZT98 887 aa31.35■■■□□ 2.61
LSM7-205ENST00000589532 ERFEQ4G0M1 354 aa31.34■■■□□ 2.61
LSM7-205ENST00000589532 LRP10Q7Z4F1 713 aa31.34■■■□□ 2.61
LSM7-205ENST00000589532 SMC1BQ8NDV3 1235 aa31.34■■■□□ 2.61
LSM7-205ENST00000589532 UBN2Q6ZU65 1347 aa31.32■■■□□ 2.6
LSM7-205ENST00000589532 MYBBP1AQ9BQG0 1328 aaKnown RBP31.32■■■□□ 2.6
LSM7-205ENST00000589532 HTRA3P83110 453 aa31.32■■■□□ 2.6
LSM7-205ENST00000589532 FAM177BA6PVY3 158 aa31.31■■■□□ 2.6
LSM7-205ENST00000589532 CRY2Q49AN0 593 aa31.31■■■□□ 2.6
LSM7-205ENST00000589532 CCDC93Q567U6 631 aa31.31■■■□□ 2.6
LSM7-205ENST00000589532 RRP7AQ9Y3A4 280 aaKnown RBP31.31■■■□□ 2.6
LSM7-205ENST00000589532 TMPOP42166 694 aaKnown RBP31.3■■■□□ 2.6
LSM7-205ENST00000589532 RIPK4P57078 832 aa31.3■■■□□ 2.6
LSM7-205ENST00000589532 NGEFQ8N5V2 710 aa31.3■■■□□ 2.6
LSM7-205ENST00000589532 TSPYL4Q9UJ04 414 aa31.3■■■□□ 2.6
LSM7-205ENST00000589532 MYL6BP14649 208 aa31.29■■■□□ 2.6
LSM7-205ENST00000589532 DDX10Q13206 875 aaKnown RBP31.29■■■□□ 2.6
LSM7-205ENST00000589532 BABAM1Q9NWV8 329 aa31.29■■■□□ 2.6
LSM7-205ENST00000589532 ANKRD36CQ5JPF3 1778 aa31.28■■■□□ 2.6
LSM7-205ENST00000589532 PDIA6Q15084 440 aa31.28■■■□□ 2.6
LSM7-205ENST00000589532 IFFO2Q5TF58 517 aa31.28■■■□□ 2.6
LSM7-205ENST00000589532 OLFM4Q6UX06 510 aa31.28■■■□□ 2.6
LSM7-205ENST00000589532 KIF6Q6ZMV9 814 aa31.28■■■□□ 2.6
LSM7-205ENST00000589532 DPY19L2Q6NUT2 758 aa31.27■■■□□ 2.6
LSM7-205ENST00000589532 NUTM1Q86Y26 1132 aa31.26■■■□□ 2.59
LSM7-205ENST00000589532 ZNF34Q8IZ26 560 aa31.26■■■□□ 2.59
LSM7-205ENST00000589532 NYXQ9GZU5 481 aa31.26■■■□□ 2.59
LSM7-205ENST00000589532 ZBTB3Q9H5J0 574 aa31.26■■■□□ 2.59
LSM7-205ENST00000589532 FKBP4Q02790 459 aaKnown RBP eCLIP31.25■■■□□ 2.59
LSM7-205ENST00000589532 KLRG1Q96E93 195 aa31.25■■■□□ 2.59
LSM7-205ENST00000589532 NTSR2O95665 410 aa31.24■■■□□ 2.59
LSM7-205ENST00000589532 LMOD3Q0VAK6 560 aa31.24■■■□□ 2.59
LSM7-205ENST00000589532 GIGYF2Q6Y7W6 1299 aaKnown RBP31.24■■■□□ 2.59
LSM7-205ENST00000589532 SCN4AP35499 1836 aa31.24■■■□□ 2.59
LSM7-205ENST00000589532 GPTP24298 496 aa31.23■■■□□ 2.59
LSM7-205ENST00000589532 PROSER3Q2NL68 480 aa31.23■■■□□ 2.59
LSM7-205ENST00000589532 DDNO94850 711 aaPredicted RBP31.22■■■□□ 2.59
LSM7-205ENST00000589532 SUSD4Q5VX71 490 aa31.22■■■□□ 2.59
LSM7-205ENST00000589532 JMYQ8N9B5 988 aa31.22■■■□□ 2.59
LSM7-205ENST00000589532 GTF2E1P29083 439 aaPredicted RBP31.21■■■□□ 2.59
LSM7-205ENST00000589532 ALDH1B1P30837 517 aa31.21■■■□□ 2.59
LSM7-205ENST00000589532 COL4A5P29400 1685 aa31.21■■■□□ 2.59
LSM7-205ENST00000589532 HOXA10P31260 410 aaPredicted RBP31.2■■■□□ 2.59
LSM7-205ENST00000589532 CCDC146Q8IYE0 955 aa31.2■■■□□ 2.59
LSM7-205ENST00000589532 L3MBTL3Q96JM7 780 aaPredicted RBP31.2■■■□□ 2.59
LSM7-205ENST00000589532 RTKN2Q8IZC4 609 aa31.19■■■□□ 2.58
LSM7-205ENST00000589532 ZNF277Q9NRM2 450 aaPredicted RBP31.19■■■□□ 2.58
LSM7-205ENST00000589532 TRIM35Q9UPQ4 493 aa31.19■■■□□ 2.58
LSM7-205ENST00000589532 ADAMTSL1Q8N6G6 1762 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms