RNA–Protein interactions for RNA: ENST00000589493.1

BECN1-210, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-210ENST00000589493 SMC4Q9NTJ3 1288 aa10.77□□□□□ -0.69
BECN1-210ENST00000589493 RGS17Q9UGC6 210 aaPredicted RBP10.77□□□□□ -0.69
BECN1-210ENST00000589493 BCL9O00512 1426 aa10.76□□□□□ -0.69
BECN1-210ENST00000589493 PARP4Q9UKK3 1724 aaKnown RBP10.76□□□□□ -0.69
BECN1-210ENST00000589493 IPO8O15397 1037 aaKnown RBP10.76□□□□□ -0.69
BECN1-210ENST00000589493 MS4A1P11836 297 aa10.76□□□□□ -0.69
BECN1-210ENST00000589493 FAM98CQ17RN3 349 aaKnown RBP10.76□□□□□ -0.69
BECN1-210ENST00000589493 ARSIQ5FYB1 569 aa10.76□□□□□ -0.69
BECN1-210ENST00000589493 CCDC30Q5VVM6 783 aa10.76□□□□□ -0.69
BECN1-210ENST00000589493 ZKSCAN2Q63HK3 967 aa10.76□□□□□ -0.69
BECN1-210ENST00000589493 ATF7IPQ6VMQ6 1270 aa10.76□□□□□ -0.69
BECN1-210ENST00000589493 PIGBQ92521 554 aa10.76□□□□□ -0.69
BECN1-210ENST00000589493 NOB1Q9ULX3 412 aaKnown RBP10.76□□□□□ -0.69
BECN1-210ENST00000589493 KIF16BQ96L93 1317 aa10.76□□□□□ -0.69
BECN1-210ENST00000589493 GLI3P10071 1580 aa10.75□□□□□ -0.69
BECN1-210ENST00000589493 SLC39A6Q13433 755 aa10.75□□□□□ -0.69
BECN1-210ENST00000589493 ZNF496Q96IT1 587 aaPredicted RBP10.75□□□□□ -0.69
BECN1-210ENST00000589493 BCL2L13Q9BXK5 485 aa10.75□□□□□ -0.69
BECN1-210ENST00000589493 SNRPA1P09661 255 aaKnown RBP10.74□□□□□ -0.69
BECN1-210ENST00000589493 TRIM27P14373 513 aa10.74□□□□□ -0.69
BECN1-210ENST00000589493 IRX6P78412 446 aaPredicted RBP10.74□□□□□ -0.69
BECN1-210ENST00000589493 POTEAQ6S8J7 498 aa10.74□□□□□ -0.69
BECN1-210ENST00000589493 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
BECN1-210ENST00000589493 KHSRPQ92945 711 aaKnown RBP eCLIP10.74□□□□□ -0.69
BECN1-210ENST00000589493 FMNL2Q96PY5 1086 aa10.74□□□□□ -0.69
BECN1-210ENST00000589493 ATG3Q9NT62 314 aa10.74□□□□□ -0.69
BECN1-210ENST00000589493 THSD7AQ9UPZ6 1657 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 RLBP1P12271 317 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 PRIM1P49642 420 aaKnown RBP10.73□□□□□ -0.69
BECN1-210ENST00000589493 AAMPQ13685 434 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 PDIA6Q15084 440 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 DZIP1LQ8IYY4 767 aaKnown RBP10.73□□□□□ -0.69
BECN1-210ENST00000589493 EXOC6Q8TAG9 804 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 FRAT1Q92837 279 aaPredicted RBP10.73□□□□□ -0.69
BECN1-210ENST00000589493 KRTAP3-3Q9BYR6 98 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 KRTAP3-2Q9BYR7 98 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 PPP4R2Q9NY27 417 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 TMOD3Q9NYL9 352 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 PTPRCP08575 1304 aa10.73□□□□□ -0.69
BECN1-210ENST00000589493 HDGFL1Q5TGJ6 251 aa10.72□□□□□ -0.69
BECN1-210ENST00000589493 SEPT12Q8IYM1 358 aa10.72□□□□□ -0.69
BECN1-210ENST00000589493 TTC5Q8N0Z6 440 aa10.72□□□□□ -0.69
BECN1-210ENST00000589493 CRBNQ96SW2 442 aa10.72□□□□□ -0.69
BECN1-210ENST00000589493 API5Q9BZZ5 524 aaKnown RBP10.72□□□□□ -0.69
BECN1-210ENST00000589493 RYDENQ9NUL5 291 aaKnown RBP10.72□□□□□ -0.69
BECN1-210ENST00000589493 TNNQ9UQP3 1299 aa10.72□□□□□ -0.69
BECN1-210ENST00000589493 USP16Q9Y5T5 823 aa10.72□□□□□ -0.69
BECN1-210ENST00000589493 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
BECN1-210ENST00000589493 SCN11AQ9UI33 1791 aa10.72□□□□□ -0.69
BECN1-210ENST00000589493 A0A0G2JS52 829 aa10.71□□□□□ -0.69
BECN1-210ENST00000589493 PRAMEF22A3QJZ6 481 aa10.71□□□□□ -0.69
BECN1-210ENST00000589493 TCERG1O14776 1098 aaKnown RBP10.71□□□□□ -0.69
BECN1-210ENST00000589493 SIPA1L3O60292 1781 aaPredicted RBP10.71□□□□□ -0.69
BECN1-210ENST00000589493 MYT1Q01538 1121 aa10.71□□□□□ -0.69
BECN1-210ENST00000589493 VARS2Q5ST30 1063 aaKnown RBP10.71□□□□□ -0.69
BECN1-210ENST00000589493 INTS3Q68E01 1043 aaKnown RBP10.71□□□□□ -0.69
BECN1-210ENST00000589493 G2E3Q7L622 706 aa10.71□□□□□ -0.69
BECN1-210ENST00000589493 LRP10Q7Z4F1 713 aa10.71□□□□□ -0.69
BECN1-210ENST00000589493 PANK1Q8TE04 598 aa10.71□□□□□ -0.69
BECN1-210ENST00000589493 STK31Q9BXU1 1019 aa10.71□□□□□ -0.69
BECN1-210ENST00000589493 TEX13AQ9BXU3 409 aaPredicted RBP10.71□□□□□ -0.69
BECN1-210ENST00000589493 DDX21Q9NR30 783 aaKnown RBP eCLIP10.71□□□□□ -0.69
BECN1-210ENST00000589493 DBF4Q9UBU7 674 aaPredicted RBP10.71□□□□□ -0.69
BECN1-210ENST00000589493 ASAP1Q9ULH1 1129 aa10.71□□□□□ -0.69
BECN1-210ENST00000589493 BRWD3Q6RI45 1802 aa10.7□□□□□ -0.7
BECN1-210ENST00000589493 KDM3BQ7LBC6 1761 aa10.7□□□□□ -0.7
BECN1-210ENST00000589493 RGS12O14924 1447 aa10.7□□□□□ -0.7
BECN1-210ENST00000589493 ABCC4O15439 1325 aa10.7□□□□□ -0.7
BECN1-210ENST00000589493 ERBB4Q15303 1308 aa10.7□□□□□ -0.7
BECN1-210ENST00000589493 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
BECN1-210ENST00000589493 MVPQ14764 893 aaKnown RBP10.7□□□□□ -0.7
BECN1-210ENST00000589493 ZBTB7BO15156 539 aaPredicted RBP10.69□□□□□ -0.7
BECN1-210ENST00000589493 SLC34A2O95436 690 aa10.69□□□□□ -0.7
BECN1-210ENST00000589493 EIF2S2P20042 333 aaKnown RBP10.69□□□□□ -0.7
BECN1-210ENST00000589493 FLIIQ13045 1269 aa10.69□□□□□ -0.7
BECN1-210ENST00000589493 SPNS2Q8IVW8 549 aa10.69□□□□□ -0.7
BECN1-210ENST00000589493 SLC4A9Q96Q91 983 aa10.69□□□□□ -0.7
BECN1-210ENST00000589493 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
BECN1-210ENST00000589493 HYPKQ9NX55 129 aa10.69□□□□□ -0.7
BECN1-210ENST00000589493 KCPQ6ZWJ8 1503 aa10.68□□□□□ -0.7
BECN1-210ENST00000589493 KCNQ2O43526 872 aa10.68□□□□□ -0.7
BECN1-210ENST00000589493 CANXP27824 592 aaKnown RBP10.68□□□□□ -0.7
BECN1-210ENST00000589493 TMEM57Q8N5G2 664 aa10.68□□□□□ -0.7
BECN1-210ENST00000589493 SMARCC1Q92922 1105 aaPredicted RBP10.68□□□□□ -0.7
BECN1-210ENST00000589493 CLUAP1Q96AJ1 413 aa10.68□□□□□ -0.7
BECN1-210ENST00000589493 PHAXQ9H814 394 aaKnown RBP10.68□□□□□ -0.7
BECN1-210ENST00000589493 CHPF2Q9P2E5 772 aa10.68□□□□□ -0.7
BECN1-210ENST00000589493 DDX19BQ9UMR2 479 aa10.68□□□□□ -0.7
BECN1-210ENST00000589493 COG6Q9Y2V7 657 aa10.68□□□□□ -0.7
BECN1-210ENST00000589493 FOXK1P85037 733 aa10.67□□□□□ -0.7
BECN1-210ENST00000589493 PROSER3Q2NL68 480 aa10.67□□□□□ -0.7
BECN1-210ENST00000589493 KRT27Q7Z3Y8 459 aa10.67□□□□□ -0.7
BECN1-210ENST00000589493 CCDC125Q86Z20 511 aa10.67□□□□□ -0.7
BECN1-210ENST00000589493 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
BECN1-210ENST00000589493 ZBTB40Q9NUA8 1239 aa10.67□□□□□ -0.7
BECN1-210ENST00000589493 IBTKQ9P2D0 1353 aaPredicted RBP10.66□□□□□ -0.7
BECN1-210ENST00000589493 NBPF26B4DH59 902 aa10.66□□□□□ -0.7
BECN1-210ENST00000589493 PTCD1O75127 700 aaKnown RBP10.66□□□□□ -0.7
BECN1-210ENST00000589493 CYP19A1P11511 503 aaPredicted RBP10.66□□□□□ -0.7
BECN1-210ENST00000589493 NBPF14Q5TI25 921 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms