RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 CAMTA2O94983 1202 aa27.26■■□□□ 1.95
R3HDM4-204ENST00000589428 ZNF652Q9Y2D9 606 aa27.25■■□□□ 1.95
R3HDM4-204ENST00000589428 MMP10P09238 476 aa27.24■■□□□ 1.95
R3HDM4-204ENST00000589428 LRP10Q7Z4F1 713 aa27.24■■□□□ 1.95
R3HDM4-204ENST00000589428 BCL2L12Q9HB09 334 aa27.24■■□□□ 1.95
R3HDM4-204ENST00000589428 VAMP4O75379 141 aa27.24■■□□□ 1.95
R3HDM4-204ENST00000589428 STK31Q9BXU1 1019 aa27.24■■□□□ 1.95
R3HDM4-204ENST00000589428 HYPKQ9NX55 129 aa27.24■■□□□ 1.95
R3HDM4-204ENST00000589428 RARSP54136 660 aaKnown RBP27.23■■□□□ 1.95
R3HDM4-204ENST00000589428 TTLL7Q6ZT98 887 aa27.23■■□□□ 1.95
R3HDM4-204ENST00000589428 MAP3K15Q6ZN16 1313 aa27.22■■□□□ 1.95
R3HDM4-204ENST00000589428 XAGE3Q8WTP9 111 aa27.21■■□□□ 1.95
R3HDM4-204ENST00000589428 RNF123Q5XPI4 1314 aa27.21■■□□□ 1.95
R3HDM4-204ENST00000589428 RGL2O15211 777 aa27.21■■□□□ 1.95
R3HDM4-204ENST00000589428 AIMP1Q12904 312 aaKnown RBP27.21■■□□□ 1.95
R3HDM4-204ENST00000589428 COPS6Q7L5N1 327 aa27.21■■□□□ 1.95
R3HDM4-204ENST00000589428 PARP3Q9Y6F1 533 aa27.21■■□□□ 1.95
R3HDM4-204ENST00000589428 ERVV-1B6SEH8 477 aa27.2■■□□□ 1.94
R3HDM4-204ENST00000589428 CLEC4GQ6UXB4 293 aa27.2■■□□□ 1.94
R3HDM4-204ENST00000589428 BCAR3O75815 825 aa27.19■■□□□ 1.94
R3HDM4-204ENST00000589428 ZNF428Q96B54 188 aa27.19■■□□□ 1.94
R3HDM4-204ENST00000589428 ZBTB3Q9H5J0 574 aa27.19■■□□□ 1.94
R3HDM4-204ENST00000589428 NFIXQ14938 502 aa27.19■■□□□ 1.94
R3HDM4-204ENST00000589428 BICDL1Q6ZP65 573 aa27.19■■□□□ 1.94
R3HDM4-204ENST00000589428 TCERG1O14776 1098 aaKnown RBP27.18■■□□□ 1.94
R3HDM4-204ENST00000589428 TBC1D9BQ66K14 1250 aa27.18■■□□□ 1.94
R3HDM4-204ENST00000589428 SSH1Q8WYL5 1049 aa27.18■■□□□ 1.94
R3HDM4-204ENST00000589428 BCL2L13Q9BXK5 485 aa27.18■■□□□ 1.94
R3HDM4-204ENST00000589428 TM4SF1P30408 202 aa27.17■■□□□ 1.94
R3HDM4-204ENST00000589428 KLHL34Q8N239 644 aa27.17■■□□□ 1.94
R3HDM4-204ENST00000589428 DDR1Q08345 913 aa27.16■■□□□ 1.94
R3HDM4-204ENST00000589428 RRP1P56182 461 aaKnown RBP27.16■■□□□ 1.94
R3HDM4-204ENST00000589428 HLFQ16534 295 aa27.16■■□□□ 1.94
R3HDM4-204ENST00000589428 CARMIL3Q8ND23 1372 aa27.15■■□□□ 1.94
R3HDM4-204ENST00000589428 POLRMTO00411 1230 aaKnown RBP27.15■■□□□ 1.94
R3HDM4-204ENST00000589428 ALDH1L2Q3SY69 923 aa27.15■■□□□ 1.94
R3HDM4-204ENST00000589428 SETDB2Q96T68 719 aa27.15■■□□□ 1.94
R3HDM4-204ENST00000589428 SMC4Q9NTJ3 1288 aa27.15■■□□□ 1.94
R3HDM4-204ENST00000589428 SLC4A2P04920 1241 aa27.14■■□□□ 1.94
R3HDM4-204ENST00000589428 PHAXQ9H814 394 aaKnown RBP27.14■■□□□ 1.94
R3HDM4-204ENST00000589428 NUP98P52948 1817 aa27.14■■□□□ 1.93
R3HDM4-204ENST00000589428 FHDC1Q9C0D6 1143 aaPredicted RBP27.13■■□□□ 1.93
R3HDM4-204ENST00000589428 NIP7Q9Y221 180 aaKnown RBP eCLIP27.13■■□□□ 1.93
R3HDM4-204ENST00000589428 ATP10DQ9P241 1426 aa27.13■■□□□ 1.93
R3HDM4-204ENST00000589428 GIGYF2Q6Y7W6 1299 aaKnown RBP27.13■■□□□ 1.93
R3HDM4-204ENST00000589428 DDX58O95786 925 aaKnown RBP27.12■■□□□ 1.93
R3HDM4-204ENST00000589428 ANKRD13DQ6ZTN6 518 aa27.12■■□□□ 1.93
R3HDM4-204ENST00000589428 PLBD2Q8NHP8 589 aa27.12■■□□□ 1.93
R3HDM4-204ENST00000589428 HSP90AB3PQ58FF7 597 aa27.11■■□□□ 1.93
R3HDM4-204ENST00000589428 CACNA1FO60840 1977 aa27.11■■□□□ 1.93
R3HDM4-204ENST00000589428 SERPINB2P05120 415 aa27.1■■□□□ 1.93
R3HDM4-204ENST00000589428 PLIN1O60240 522 aa27.1■■□□□ 1.93
R3HDM4-204ENST00000589428 NPHP1O15259 732 aa27.09■■□□□ 1.93
R3HDM4-204ENST00000589428 RIC3Q7Z5B4 369 aa27.09■■□□□ 1.93
R3HDM4-204ENST00000589428 C10orf71Q711Q0 1435 aa27.09■■□□□ 1.93
R3HDM4-204ENST00000589428 AFDNP55196 1824 aaKnown RBP27.08■■□□□ 1.93
R3HDM4-204ENST00000589428 ANKRD36CQ5JPF3 1778 aa27.08■■□□□ 1.93
R3HDM4-204ENST00000589428 ARFGEF2Q9Y6D5 1785 aa27.08■■□□□ 1.93
R3HDM4-204ENST00000589428 MRPL50Q8N5N7 158 aaKnown RBP27.08■■□□□ 1.93
R3HDM4-204ENST00000589428 CD2APQ9Y5K6 639 aa27.08■■□□□ 1.93
R3HDM4-204ENST00000589428 NRXN2Q9P2S2 1712 aa27.08■■□□□ 1.93
R3HDM4-204ENST00000589428 GPTP24298 496 aa27.07■■□□□ 1.92
R3HDM4-204ENST00000589428 BRPF1P55201 1214 aaPredicted RBP27.07■■□□□ 1.92
R3HDM4-204ENST00000589428 FLIIQ13045 1269 aa27.07■■□□□ 1.92
R3HDM4-204ENST00000589428 G2E3Q7L622 706 aa27.07■■□□□ 1.92
R3HDM4-204ENST00000589428 NBPF5PQ86XG9 351 aaPredicted RBP27.07■■□□□ 1.92
R3HDM4-204ENST00000589428 SYT17Q9BSW7 474 aa27.07■■□□□ 1.92
R3HDM4-204ENST00000589428 CNBD1Q8NA66 436 aa27.06■■□□□ 1.92
R3HDM4-204ENST00000589428 KIF16BQ96L93 1317 aa27.06■■□□□ 1.92
R3HDM4-204ENST00000589428 ZNF34Q8IZ26 560 aa27.05■■□□□ 1.92
R3HDM4-204ENST00000589428 FRAT1Q92837 279 aaPredicted RBP27.05■■□□□ 1.92
R3HDM4-204ENST00000589428 FKBP5Q13451 457 aaPredicted RBP27.04■■□□□ 1.92
R3HDM4-204ENST00000589428 TCIRG1Q13488 830 aa27.04■■□□□ 1.92
R3HDM4-204ENST00000589428 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.04■■□□□ 1.92
R3HDM4-204ENST00000589428 UBN2Q6ZU65 1347 aa27.04■■□□□ 1.92
R3HDM4-204ENST00000589428 KIF13BQ9NQT8 1826 aa27.04■■□□□ 1.92
R3HDM4-204ENST00000589428 FAM177BA6PVY3 158 aa27.04■■□□□ 1.92
R3HDM4-204ENST00000589428 IRX6P78412 446 aaPredicted RBP27.04■■□□□ 1.92
R3HDM4-204ENST00000589428 PARP10Q53GL7 1025 aa27.04■■□□□ 1.92
R3HDM4-204ENST00000589428 ST5P78524 1137 aa27.03■■□□□ 1.92
R3HDM4-204ENST00000589428 PRR5LQ6MZQ0 368 aa27.03■■□□□ 1.92
R3HDM4-204ENST00000589428 KSR2Q6VAB6 950 aa27.03■■□□□ 1.92
R3HDM4-204ENST00000589428 NYXQ9GZU5 481 aa27.03■■□□□ 1.92
R3HDM4-204ENST00000589428 IBTKQ9P2D0 1353 aaPredicted RBP27.02■■□□□ 1.92
R3HDM4-204ENST00000589428 TPTE2Q6XPS3 522 aa27.02■■□□□ 1.92
R3HDM4-204ENST00000589428 NOB1Q9ULX3 412 aaKnown RBP27.02■■□□□ 1.92
R3HDM4-204ENST00000589428 MAP3K2Q9Y2U5 619 aa27.02■■□□□ 1.92
R3HDM4-204ENST00000589428 PI4KAP2A4QPH2 592 aa27.02■■□□□ 1.92
R3HDM4-204ENST00000589428 NEFLP07196 543 aa27.02■■□□□ 1.92
R3HDM4-204ENST00000589428 PI4KAP1Q8N8J0 262 aa27.02■■□□□ 1.92
R3HDM4-204ENST00000589428 PPP1R42Q7Z4L9 355 aa27.01■■□□□ 1.91
R3HDM4-204ENST00000589428 ADCY9O60503 1353 aa27■■□□□ 1.91
R3HDM4-204ENST00000589428 GTF2E1P29083 439 aaPredicted RBP27■■□□□ 1.91
R3HDM4-204ENST00000589428 NLGN2Q8NFZ4 835 aa27■■□□□ 1.91
R3HDM4-204ENST00000589428 C20orf194Q5TEA3 1177 aa26.99■■□□□ 1.91
R3HDM4-204ENST00000589428 ZKSCAN2Q63HK3 967 aa26.99■■□□□ 1.91
R3HDM4-204ENST00000589428 MYD88Q99836 296 aa26.99■■□□□ 1.91
R3HDM4-204ENST00000589428 METTL22Q9BUU2 404 aaPredicted RBP26.99■■□□□ 1.91
R3HDM4-204ENST00000589428 SUSD4Q5VX71 490 aa26.99■■□□□ 1.91
R3HDM4-204ENST00000589428 NLRP10Q86W26 655 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms