RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SLC4A10Q6U841 1118 aa12.34□□□□□ -0.43
VPS25-202ENST00000589219 SLC16A10Q8TF71 515 aa12.34□□□□□ -0.43
VPS25-202ENST00000589219 PCDH11XQ9BZA7 1347 aa12.34□□□□□ -0.43
VPS25-202ENST00000589219 PCDH11YQ9BZA8 1340 aa12.34□□□□□ -0.43
VPS25-202ENST00000589219 PKD1L3Q7Z443 1732 aa12.34□□□□□ -0.43
VPS25-202ENST00000589219 RBM25P49756 843 aaKnown RBP12.33□□□□□ -0.44
VPS25-202ENST00000589219 ZNF827Q17R98 1081 aa12.33□□□□□ -0.44
VPS25-202ENST00000589219 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
VPS25-202ENST00000589219 ARXQ96QS3 562 aa12.33□□□□□ -0.44
VPS25-202ENST00000589219 TFCP2L1Q9NZI6 479 aa12.33□□□□□ -0.44
VPS25-202ENST00000589219 BTBD11A6QL63 1104 aa12.32□□□□□ -0.44
VPS25-202ENST00000589219 F6X3S4 739 aa12.32□□□□□ -0.44
VPS25-202ENST00000589219 TTC22Q5TAA0 569 aa12.32□□□□□ -0.44
VPS25-202ENST00000589219 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
VPS25-202ENST00000589219 SYT17Q9BSW7 474 aa12.32□□□□□ -0.44
VPS25-202ENST00000589219 FHDC1Q9C0D6 1143 aaPredicted RBP12.32□□□□□ -0.44
VPS25-202ENST00000589219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS25-202ENST00000589219 HEG1Q9ULI3 1381 aa12.31□□□□□ -0.44
VPS25-202ENST00000589219 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
VPS25-202ENST00000589219 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
VPS25-202ENST00000589219 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
VPS25-202ENST00000589219 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
VPS25-202ENST00000589219 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
VPS25-202ENST00000589219 POLD1P28340 1107 aa12.3□□□□□ -0.44
VPS25-202ENST00000589219 SPG7Q9UQ90 795 aa12.3□□□□□ -0.44
VPS25-202ENST00000589219 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
VPS25-202ENST00000589219 TUBGCP6Q96RT7 1819 aa12.3□□□□□ -0.44
VPS25-202ENST00000589219 UBTFL1P0CB47 393 aaPredicted RBP12.29□□□□□ -0.44
VPS25-202ENST00000589219 GSPT1P15170 499 aaKnown RBP12.29□□□□□ -0.44
VPS25-202ENST00000589219 CASC1Q6TDU7 716 aa12.29□□□□□ -0.44
VPS25-202ENST00000589219 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
VPS25-202ENST00000589219 TBC1D9Q6ZT07 1266 aa12.29□□□□□ -0.44
VPS25-202ENST00000589219 HSCBQ8IWL3 235 aa12.29□□□□□ -0.44
VPS25-202ENST00000589219 TBC1D2Q9BYX2 928 aa12.29□□□□□ -0.44
VPS25-202ENST00000589219 SRCIN1Q9C0H9 1055 aa12.29□□□□□ -0.44
VPS25-202ENST00000589219 DBF4Q9UBU7 674 aaPredicted RBP12.29□□□□□ -0.44
VPS25-202ENST00000589219 CHD4Q14839 1912 aa12.29□□□□□ -0.44
VPS25-202ENST00000589219 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
VPS25-202ENST00000589219 COL24A1Q17RW2 1714 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 ITGB4P16144 1822 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 KCNQ4P56696 695 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 ATP8B2P98198 1209 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 DNAAF4Q8WXU2 420 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 SNX21Q969T3 373 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 OSBPL3Q9H4L5 887 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 AOX1Q06278 1338 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 PNPLA7Q6ZV29 1317 aa12.28□□□□□ -0.44
VPS25-202ENST00000589219 C5P01031 1676 aa12.27□□□□□ -0.45
VPS25-202ENST00000589219 CYP27B1O15528 508 aa12.27□□□□□ -0.45
VPS25-202ENST00000589219 HSP90AB1P08238 724 aaKnown RBP12.27□□□□□ -0.45
VPS25-202ENST00000589219 NFKBIBQ15653 356 aa12.27□□□□□ -0.45
VPS25-202ENST00000589219 SMARCC1Q92922 1105 aaPredicted RBP12.27□□□□□ -0.45
VPS25-202ENST00000589219 HDAC5Q9UQL6 1122 aa12.27□□□□□ -0.45
VPS25-202ENST00000589219 TAF1LQ8IZX4 1826 aa12.26□□□□□ -0.45
VPS25-202ENST00000589219 GIGYF1O75420 1035 aaPredicted RBP12.26□□□□□ -0.45
VPS25-202ENST00000589219 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
VPS25-202ENST00000589219 PHKG2P15735 406 aa12.26□□□□□ -0.45
VPS25-202ENST00000589219 EIF2S2P20042 333 aaKnown RBP12.26□□□□□ -0.45
VPS25-202ENST00000589219 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
VPS25-202ENST00000589219 LRRCC1Q9C099 1032 aa12.26□□□□□ -0.45
VPS25-202ENST00000589219 LRRFIP2Q9Y608 721 aaKnown RBP12.26□□□□□ -0.45
VPS25-202ENST00000589219 ADCY9O60503 1353 aa12.26□□□□□ -0.45
VPS25-202ENST00000589219 KCNQ3O43525 872 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 RAB11FIP3O75154 756 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
VPS25-202ENST00000589219 BEND3Q5T5X7 828 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 IFNL2Q8IZJ0 200 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 SSH3Q8TE77 659 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 USP44Q9H0E7 712 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 PHAXQ9H814 394 aaKnown RBP12.25□□□□□ -0.45
VPS25-202ENST00000589219 SLC52A2Q9HAB3 445 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 SALL3Q9BXA9 1300 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 LAMB4A4D0S4 1761 aa12.25□□□□□ -0.45
VPS25-202ENST00000589219 DDX58O95786 925 aaKnown RBP12.24□□□□□ -0.45
VPS25-202ENST00000589219 POLA2Q14181 598 aa12.24□□□□□ -0.45
VPS25-202ENST00000589219 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
VPS25-202ENST00000589219 ANTXR1Q9H6X2 564 aa12.24□□□□□ -0.45
VPS25-202ENST00000589219 TOGARAM1Q9Y4F4 1720 aa12.24□□□□□ -0.45
VPS25-202ENST00000589219 SMARCA5O60264 1052 aaPredicted RBP12.23□□□□□ -0.45
VPS25-202ENST00000589219 DEKP35659 375 aaKnown RBP12.23□□□□□ -0.45
VPS25-202ENST00000589219 PDE1AP54750 535 aa12.23□□□□□ -0.45
VPS25-202ENST00000589219 GPR162Q16538 588 aa12.23□□□□□ -0.45
VPS25-202ENST00000589219 HSP90AB4PQ58FF6 505 aa12.23□□□□□ -0.45
VPS25-202ENST00000589219 DCAF5Q96JK2 942 aa12.23□□□□□ -0.45
VPS25-202ENST00000589219 DDX21Q9NR30 783 aaKnown RBP eCLIP12.23□□□□□ -0.45
VPS25-202ENST00000589219 UTRNP46939 3433 aa12.23□□□□□ -0.45
VPS25-202ENST00000589219 PNMA6EA0A0J9YXQ4 647 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 PI4KAP2A4QPH2 592 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 REC8O95072 547 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 SDSP20132 328 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 MX1P20591 662 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 MTX1Q13505 466 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 ZNF790Q6PG37 636 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 KSR2Q6VAB6 950 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 COL23A1Q86Y22 540 aaPredicted RBP12.22□□□□□ -0.45
VPS25-202ENST00000589219 PI4KAP1Q8N8J0 262 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms