RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 DDX21Q9NR30 783 aaKnown RBP eCLIP11.66□□□□□ -0.54
RETREG3-207ENST00000589007 SZT2Q5T011 3432 aa11.65□□□□□ -0.54
RETREG3-207ENST00000589007 FZD9O00144 591 aa11.65□□□□□ -0.54
RETREG3-207ENST00000589007 AOC2O75106 756 aa11.65□□□□□ -0.54
RETREG3-207ENST00000589007 MTHFSP49914 203 aa11.65□□□□□ -0.54
RETREG3-207ENST00000589007 PLEKHO1Q53GL0 409 aaPredicted RBP11.65□□□□□ -0.54
RETREG3-207ENST00000589007 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
RETREG3-207ENST00000589007 ZNF622Q969S3 477 aaKnown RBP eCLIP11.65□□□□□ -0.54
RETREG3-207ENST00000589007 LGR6Q9HBX8 967 aa11.65□□□□□ -0.54
RETREG3-207ENST00000589007 HACL1Q9UJ83 578 aa11.65□□□□□ -0.54
RETREG3-207ENST00000589007 AMOTQ4VCS5 1084 aa11.64□□□□□ -0.55
RETREG3-207ENST00000589007 EAPPQ56P03 285 aaPredicted RBP11.64□□□□□ -0.55
RETREG3-207ENST00000589007 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
RETREG3-207ENST00000589007 KLRG2A4D1S0 409 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-207ENST00000589007 SCNN1DP51172 638 aa11.63□□□□□ -0.55
RETREG3-207ENST00000589007 BICDL1Q6ZP65 573 aa11.63□□□□□ -0.55
RETREG3-207ENST00000589007 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
RETREG3-207ENST00000589007 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
RETREG3-207ENST00000589007 LAMB2P55268 1798 aa11.62□□□□□ -0.55
RETREG3-207ENST00000589007 TRAF5O00463 557 aa11.62□□□□□ -0.55
RETREG3-207ENST00000589007 CAMTA2O94983 1202 aa11.62□□□□□ -0.55
RETREG3-207ENST00000589007 PDE6BP35913 854 aa11.62□□□□□ -0.55
RETREG3-207ENST00000589007 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
RETREG3-207ENST00000589007 VSIG10Q8N0Z9 540 aa11.62□□□□□ -0.55
RETREG3-207ENST00000589007 ZIC5Q96T25 663 aa11.62□□□□□ -0.55
RETREG3-207ENST00000589007 ZNF277Q9NRM2 450 aaPredicted RBP11.62□□□□□ -0.55
RETREG3-207ENST00000589007 NUP98P52948 1817 aa11.62□□□□□ -0.55
RETREG3-207ENST00000589007 AKAP11Q9UKA4 1901 aa11.61□□□□□ -0.55
RETREG3-207ENST00000589007 GPR101Q96P66 508 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-207ENST00000589007 ABT1Q9ULW3 272 aaKnown RBP11.61□□□□□ -0.55
RETREG3-207ENST00000589007 RBBP6Q7Z6E9 1792 aaKnown RBP11.61□□□□□ -0.55
RETREG3-207ENST00000589007 COL3A1P02461 1466 aaPredicted RBP11.6□□□□□ -0.55
RETREG3-207ENST00000589007 RNMTO43148 476 aaKnown RBP11.6□□□□□ -0.55
RETREG3-207ENST00000589007 CANXP27824 592 aaKnown RBP11.6□□□□□ -0.55
RETREG3-207ENST00000589007 CCDC93Q567U6 631 aa11.6□□□□□ -0.55
RETREG3-207ENST00000589007 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
RETREG3-207ENST00000589007 CNKSR1Q969H4 720 aa11.6□□□□□ -0.55
RETREG3-207ENST00000589007 MASTLQ96GX5 879 aa11.6□□□□□ -0.55
RETREG3-207ENST00000589007 CENPFP49454 3210 aa11.6□□□□□ -0.55
RETREG3-207ENST00000589007 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
RETREG3-207ENST00000589007 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
RETREG3-207ENST00000589007 HEG1Q9ULI3 1381 aa11.59□□□□□ -0.55
RETREG3-207ENST00000589007 SLC24A1O60721 1099 aa11.59□□□□□ -0.55
RETREG3-207ENST00000589007 IL13P35225 146 aa11.59□□□□□ -0.55
RETREG3-207ENST00000589007 AKAP4Q5JQC9 854 aa11.59□□□□□ -0.55
RETREG3-207ENST00000589007 C1orf141Q5JVX7 400 aa11.59□□□□□ -0.55
RETREG3-207ENST00000589007 SAPCD2Q86UD0 394 aa11.59□□□□□ -0.55
RETREG3-207ENST00000589007 PNMA8AQ86V59 439 aaPredicted RBP11.59□□□□□ -0.55
RETREG3-207ENST00000589007 GPC2Q8N158 579 aa11.59□□□□□ -0.55
RETREG3-207ENST00000589007 LRRC37AA6NMS7 1700 aa11.58□□□□□ -0.56
RETREG3-207ENST00000589007 ABCC12Q96J65 1359 aa11.58□□□□□ -0.56
RETREG3-207ENST00000589007 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
RETREG3-207ENST00000589007 MAP2K2P36507 400 aa11.58□□□□□ -0.56
RETREG3-207ENST00000589007 IARSP41252 1262 aaKnown RBP11.58□□□□□ -0.56
RETREG3-207ENST00000589007 EPS15P42566 896 aa11.58□□□□□ -0.56
RETREG3-207ENST00000589007 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-207ENST00000589007 SOX10P56693 466 aa11.58□□□□□ -0.56
RETREG3-207ENST00000589007 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
RETREG3-207ENST00000589007 SULT6B1Q6IMI4 303 aa11.58□□□□□ -0.56
RETREG3-207ENST00000589007 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
RETREG3-207ENST00000589007 TNNT2P45379 298 aaPredicted RBP11.57□□□□□ -0.56
RETREG3-207ENST00000589007 DGKZQ13574 1117 aa11.57□□□□□ -0.56
RETREG3-207ENST00000589007 ZNF496Q96IT1 587 aaPredicted RBP11.57□□□□□ -0.56
RETREG3-207ENST00000589007 TBC1D2BQ9UPU7 963 aa11.57□□□□□ -0.56
RETREG3-207ENST00000589007 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
RETREG3-207ENST00000589007 KDM3BQ7LBC6 1761 aa11.56□□□□□ -0.56
RETREG3-207ENST00000589007 ECE1P42892 770 aa11.56□□□□□ -0.56
RETREG3-207ENST00000589007 HHIPL1Q96JK4 782 aa11.56□□□□□ -0.56
RETREG3-207ENST00000589007 LAMB1P07942 1786 aa11.56□□□□□ -0.56
RETREG3-207ENST00000589007 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
RETREG3-207ENST00000589007 PSMD1Q99460 953 aa11.55□□□□□ -0.56
RETREG3-207ENST00000589007 ZNF646O15015 1829 aaPredicted RBP11.55□□□□□ -0.56
RETREG3-207ENST00000589007 FAM155AB1AL88 458 aaPredicted RBP11.54□□□□□ -0.56
RETREG3-207ENST00000589007 CA12O43570 354 aa11.54□□□□□ -0.56
RETREG3-207ENST00000589007 NPR1P16066 1061 aa11.54□□□□□ -0.56
RETREG3-207ENST00000589007 GRM1Q13255 1194 aa11.54□□□□□ -0.56
RETREG3-207ENST00000589007 CIAPIN1Q6FI81 312 aa11.54□□□□□ -0.56
RETREG3-207ENST00000589007 SYNE4Q8N205 404 aa11.54□□□□□ -0.56
RETREG3-207ENST00000589007 COL4A1P02462 1669 aa11.54□□□□□ -0.56
RETREG3-207ENST00000589007 TAF1P21675 1872 aa11.54□□□□□ -0.56
RETREG3-207ENST00000589007 ANKRD36CQ5JPF3 1778 aa11.54□□□□□ -0.56
RETREG3-207ENST00000589007 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
RETREG3-207ENST00000589007 A0A087WZG4 1122 aa11.53□□□□□ -0.56
RETREG3-207ENST00000589007 A1BGP04217 495 aa11.53□□□□□ -0.56
RETREG3-207ENST00000589007 MTHFSDQ2M296 383 aaKnown RBP11.53□□□□□ -0.56
RETREG3-207ENST00000589007 CRY2Q49AN0 593 aa11.53□□□□□ -0.56
RETREG3-207ENST00000589007 PGAP2Q9UHJ9 254 aa11.53□□□□□ -0.56
RETREG3-207ENST00000589007 PAPPA2Q9BXP8 1791 aa11.53□□□□□ -0.56
RETREG3-207ENST00000589007 PSME4Q14997 1843 aa11.52□□□□□ -0.57
RETREG3-207ENST00000589007 ST5P78524 1137 aa11.52□□□□□ -0.57
RETREG3-207ENST00000589007 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
RETREG3-207ENST00000589007 SCN9AQ15858 1988 aa11.51□□□□□ -0.57
RETREG3-207ENST00000589007 PRAMEF22A3QJZ6 481 aa11.51□□□□□ -0.57
RETREG3-207ENST00000589007 PIP4K2AP48426 406 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-207ENST00000589007 HIRAP54198 1017 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-207ENST00000589007 CDCA8Q53HL2 280 aa11.51□□□□□ -0.57
RETREG3-207ENST00000589007 DLK2Q6UY11 383 aa11.51□□□□□ -0.57
RETREG3-207ENST00000589007 PAXIP1Q6ZW49 1069 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-207ENST00000589007 USP50Q70EL3 339 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-207ENST00000589007 SETDB2Q96T68 719 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms