RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 SIRT1Q96EB6 747 aa11.55□□□□□ -0.56
ATG4D-210ENST00000588972 ERVK-7P63135 1459 aa11.55□□□□□ -0.56
ATG4D-210ENST00000588972 IGSF3O75054 1194 aa11.54□□□□□ -0.56
ATG4D-210ENST00000588972 USP4Q13107 963 aa11.54□□□□□ -0.56
ATG4D-210ENST00000588972 TJAP1Q5JTD0 557 aa11.54□□□□□ -0.56
ATG4D-210ENST00000588972 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
ATG4D-210ENST00000588972 UBR1Q8IWV7 1749 aa11.53□□□□□ -0.56
ATG4D-210ENST00000588972 ABL1P00519 1130 aa11.53□□□□□ -0.56
ATG4D-210ENST00000588972 IL21Q9HBE4 155 aa11.53□□□□□ -0.56
ATG4D-210ENST00000588972 PCDH10Q9P2E7 1040 aa11.53□□□□□ -0.56
ATG4D-210ENST00000588972 MAST1Q9Y2H9 1570 aa11.53□□□□□ -0.56
ATG4D-210ENST00000588972 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.56
ATG4D-210ENST00000588972 ZNF211Q13398 564 aaPredicted RBP11.52□□□□□ -0.57
ATG4D-210ENST00000588972 TRMT44Q8IYL2 757 aaKnown RBP11.52□□□□□ -0.57
ATG4D-210ENST00000588972 SEPT12Q8IYM1 358 aa11.52□□□□□ -0.57
ATG4D-210ENST00000588972 FCF1Q9Y324 198 aaKnown RBP11.52□□□□□ -0.57
ATG4D-210ENST00000588972 MROH1Q8NDA8 1641 aa11.52□□□□□ -0.57
ATG4D-210ENST00000588972 LGR5O75473 907 aa11.51□□□□□ -0.57
ATG4D-210ENST00000588972 S1PR4O95977 384 aa11.51□□□□□ -0.57
ATG4D-210ENST00000588972 CCDC125Q86Z20 511 aa11.51□□□□□ -0.57
ATG4D-210ENST00000588972 HINFPQ9BQA5 517 aa11.51□□□□□ -0.57
ATG4D-210ENST00000588972 BCL2L13Q9BXK5 485 aa11.51□□□□□ -0.57
ATG4D-210ENST00000588972 KIAA1522Q9P206 1035 aaPredicted RBP11.51□□□□□ -0.57
ATG4D-210ENST00000588972 CDV3Q9UKY7 258 aaKnown RBP11.51□□□□□ -0.57
ATG4D-210ENST00000588972 CEP152O94986 1710 aa11.5□□□□□ -0.57
ATG4D-210ENST00000588972 H3BRB1 525 aa11.5□□□□□ -0.57
ATG4D-210ENST00000588972 ICMTO60725 284 aa11.5□□□□□ -0.57
ATG4D-210ENST00000588972 ZNF16P17020 682 aaPredicted RBP11.5□□□□□ -0.57
ATG4D-210ENST00000588972 NPAS4Q8IUM7 802 aa11.5□□□□□ -0.57
ATG4D-210ENST00000588972 TUT1Q9H6E5 874 aaKnown RBP11.5□□□□□ -0.57
ATG4D-210ENST00000588972 ANO2Q9NQ90 1003 aa11.5□□□□□ -0.57
ATG4D-210ENST00000588972 IGSF5Q9NSI5 407 aa11.5□□□□□ -0.57
ATG4D-210ENST00000588972 ARHGAP23Q9P227 1491 aa11.5□□□□□ -0.57
ATG4D-210ENST00000588972 SLIT1O75093 1534 aa11.5□□□□□ -0.57
ATG4D-210ENST00000588972 ANKRD33BA6NCL7 494 aa11.49□□□□□ -0.57
ATG4D-210ENST00000588972 TSPY4P0CV99 314 aa11.49□□□□□ -0.57
ATG4D-210ENST00000588972 TSPY10P0CW01 314 aa11.49□□□□□ -0.57
ATG4D-210ENST00000588972 SH3BP2P78314 561 aa11.49□□□□□ -0.57
ATG4D-210ENST00000588972 MYOM3Q5VTT5 1437 aa11.49□□□□□ -0.57
ATG4D-210ENST00000588972 XIRP1Q702N8 1843 aaKnown RBP11.49□□□□□ -0.57
ATG4D-210ENST00000588972 POTEMA6NI47 508 aa11.48□□□□□ -0.57
ATG4D-210ENST00000588972 M0R2N6 131 aa11.48□□□□□ -0.57
ATG4D-210ENST00000588972 WEE1P30291 646 aa11.48□□□□□ -0.57
ATG4D-210ENST00000588972 TSEN2Q8NCE0 465 aaKnown RBP11.48□□□□□ -0.57
ATG4D-210ENST00000588972 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
ATG4D-210ENST00000588972 MRRFQ96E11 262 aaKnown RBP11.48□□□□□ -0.57
ATG4D-210ENST00000588972 SEPT3Q9UH03 358 aa11.48□□□□□ -0.57
ATG4D-210ENST00000588972 PRDM15P57071 1507 aaPredicted RBP11.48□□□□□ -0.57
ATG4D-210ENST00000588972 PPARGC1BQ86YN6 1023 aaKnown RBP11.47□□□□□ -0.57
ATG4D-210ENST00000588972 GLYCTKQ8IVS8 523 aa11.47□□□□□ -0.57
ATG4D-210ENST00000588972 GTF3C2Q8WUA4 911 aaPredicted RBP11.47□□□□□ -0.57
ATG4D-210ENST00000588972 MKNK1Q9BUB5 465 aa11.47□□□□□ -0.57
ATG4D-210ENST00000588972 DUOX2Q9NRD8 1548 aa11.46□□□□□ -0.57
ATG4D-210ENST00000588972 GIPC2Q8TF65 315 aa11.46□□□□□ -0.57
ATG4D-210ENST00000588972 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
ATG4D-210ENST00000588972 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.57
ATG4D-210ENST00000588972 DNMT3AQ9Y6K1 912 aaPredicted RBP11.46□□□□□ -0.57
ATG4D-210ENST00000588972 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.58
ATG4D-210ENST00000588972 C21orf2O43822 256 aa11.45□□□□□ -0.58
ATG4D-210ENST00000588972 MYCP01106 439 aaPredicted RBP11.45□□□□□ -0.58
ATG4D-210ENST00000588972 RAB15P59190 212 aa11.45□□□□□ -0.58
ATG4D-210ENST00000588972 FKBP5Q13451 457 aaPredicted RBP11.45□□□□□ -0.58
ATG4D-210ENST00000588972 ECM1Q16610 540 aa11.45□□□□□ -0.58
ATG4D-210ENST00000588972 CAPN12Q6ZSI9 719 aa11.45□□□□□ -0.58
ATG4D-210ENST00000588972 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.45□□□□□ -0.58
ATG4D-210ENST00000588972 KCTD15Q96SI1 283 aaPredicted RBP11.45□□□□□ -0.58
ATG4D-210ENST00000588972 RGS17Q9UGC6 210 aaPredicted RBP11.45□□□□□ -0.58
ATG4D-210ENST00000588972 ARHGAP31Q2M1Z3 1444 aa11.44□□□□□ -0.58
ATG4D-210ENST00000588972 FAM135BQ49AJ0 1406 aa11.44□□□□□ -0.58
ATG4D-210ENST00000588972 KDM5AP29375 1690 aaKnown RBP11.44□□□□□ -0.58
ATG4D-210ENST00000588972 SCTRP47872 440 aa11.44□□□□□ -0.58
ATG4D-210ENST00000588972 PURBQ96QR8 312 aaKnown RBP11.44□□□□□ -0.58
ATG4D-210ENST00000588972 PIK3C2BO00750 1634 aa11.44□□□□□ -0.58
ATG4D-210ENST00000588972 CFAP65Q6ZU64 1925 aaKnown RBP11.44□□□□□ -0.58
ATG4D-210ENST00000588972 FGD6Q6ZV73 1430 aa11.43□□□□□ -0.58
ATG4D-210ENST00000588972 LTKP29376 864 aa11.43□□□□□ -0.58
ATG4D-210ENST00000588972 PTPN5P54829 565 aa11.43□□□□□ -0.58
ATG4D-210ENST00000588972 ZNF358Q9NW07 568 aa11.43□□□□□ -0.58
ATG4D-210ENST00000588972 ERBINQ96RT1 1412 aa11.43□□□□□ -0.58
ATG4D-210ENST00000588972 CROCC2H7BZ55 1655 aa11.43□□□□□ -0.58
ATG4D-210ENST00000588972 ROBO1Q9Y6N7 1651 aa11.43□□□□□ -0.58
ATG4D-210ENST00000588972 FKBP4Q02790 459 aaKnown RBP eCLIP11.42□□□□□ -0.58
ATG4D-210ENST00000588972 EID1Q9Y6B2 187 aa11.42□□□□□ -0.58
ATG4D-210ENST00000588972 TMEM2Q9UHN6 1383 aa11.41□□□□□ -0.58
ATG4D-210ENST00000588972 PTCD1O75127 700 aaKnown RBP11.41□□□□□ -0.58
ATG4D-210ENST00000588972 MAPK1P28482 360 aa11.41□□□□□ -0.58
ATG4D-210ENST00000588972 ARHGAP4P98171 946 aa11.41□□□□□ -0.58
ATG4D-210ENST00000588972 SF3B2Q13435 895 aaKnown RBP11.41□□□□□ -0.58
ATG4D-210ENST00000588972 MTMR3Q13615 1198 aa11.41□□□□□ -0.58
ATG4D-210ENST00000588972 INTS6LQ5JSJ4 861 aaKnown RBP11.41□□□□□ -0.58
ATG4D-210ENST00000588972 TMEM94Q12767 1356 aa11.41□□□□□ -0.58
ATG4D-210ENST00000588972 KIF15Q9NS87 1388 aa11.41□□□□□ -0.58
ATG4D-210ENST00000588972 EFCAB6Q5THR3 1501 aa11.4□□□□□ -0.58
ATG4D-210ENST00000588972 NKTRP30414 1462 aaKnown RBP11.4□□□□□ -0.58
ATG4D-210ENST00000588972 TMEM229AB2RXF0 380 aa11.4□□□□□ -0.58
ATG4D-210ENST00000588972 ERVH48-1M5A8F1 160 aa11.4□□□□□ -0.58
ATG4D-210ENST00000588972 GAS2L2Q8NHY3 880 aa11.4□□□□□ -0.58
ATG4D-210ENST00000588972 COL26A1Q96A83 441 aa11.4□□□□□ -0.58
ATG4D-210ENST00000588972 ASB16Q96NS5 453 aa11.4□□□□□ -0.58
ATG4D-210ENST00000588972 DCTN4Q9UJW0 460 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms