RNA–Protein interactions for RNA: ENST00000588892.1

U2AF1L4-210, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 2,582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-210	ENST00000588892	RBM27	Q9P2N5	1060 aa	Known RBP	13.72	□□□□□ -0.21
U2AF1L4-210	ENST00000588892	PRIM1	P49642	420 aa	Known RBP	13.71	□□□□□ -0.21
U2AF1L4-210	ENST00000588892	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.71	□□□□□ -0.21
U2AF1L4-210	ENST00000588892	TTC5	Q8N0Z6	440 aa		13.71	□□□□□ -0.21
U2AF1L4-210	ENST00000588892	ADCY9	O60503	1353 aa		13.71	□□□□□ -0.21
U2AF1L4-210	ENST00000588892	SPATA31A1	Q5TZJ5	1347 aa		13.71	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	ATP10D	Q9P241	1426 aa		13.71	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	CCDC9	Q9Y3X0	531 aa	Known RBP	13.71	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	SOS1	Q07889	1333 aa	Predicted RBP	13.7	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	PTMS	P20962	102 aa		13.7	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	DBF4	Q9UBU7	674 aa	Predicted RBP	13.7	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	ASAP1	Q9ULH1	1129 aa		13.7	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	ITGB4	P16144	1822 aa		13.69	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	PIGB	Q92521	554 aa		13.69	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	LRP6	O75581	1613 aa		13.69	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	UQCRHL	A0A096LP55	91 aa		13.69	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	UQCRH	P07919	91 aa		13.69	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	HSPA1L	P34931	641 aa		13.69	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	CEP85	Q6P2H3	762 aa		13.69	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	USP44	Q9H0E7	712 aa		13.69	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	LMBRD1	Q9NUN5	540 aa		13.69	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	SLIT2	O94813	1529 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	WNK3	Q9BYP7	1800 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	ERVV-2	B6SEH9	535 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	PRPF40A	O75400	957 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	CCT4	P50991	539 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	LRP10	Q7Z4F1	713 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	FMNL2	Q96PY5	1086 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	MAP3K2	Q9Y2U5	619 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	PLEKHG2	Q9H7P9	1386 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	EXOC5	O00471	708 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	SNRPA1	P09661	255 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	GSPT1	P15170	499 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	ZNF445	P59923	1031 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	CWF19L2	Q2TBE0	894 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	SYTL4	Q96C24	671 aa	Predicted RBP	13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	NGLY1	Q96IV0	654 aa		13.68	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	BEND3	Q5T5X7	828 aa		13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	ZGPAT	Q8N5A5	531 aa	Known RBP	13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	DNAAF4	Q8WXU2	420 aa		13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	NOL7	Q9UMY1	257 aa	Known RBP	13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	KCP	Q6ZWJ8	1503 aa		13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	APBB1	O00213	710 aa		13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	CLEC17A	Q6ZS10	378 aa		13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	GPT2	Q8TD30	523 aa		13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	PRDM4	Q9UKN5	801 aa		13.67	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	SPATA31A5	Q5VU36	1347 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	SPATA31A7	Q8IWB4	1347 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	UBR2	Q8IWV8	1755 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	BCL9L	Q86UU0	1499 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	NBPF26	B4DH59	902 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	A1BG	P04217	495 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	NBPF14	Q5TI25	921 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	NBPF10	Q6P3W6	841 aa	Known RBP	13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	COPS6	Q7L5N1	327 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	NBPF15	Q8N660	670 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	XAGE3	Q8WTP9	111 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	ACSBG1	Q96GR2	724 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	TMOD3	Q9NYL9	352 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	JCAD	Q9P266	1359 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892		A0A0G2JS52	829 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	PNMA6E	A0A0J9YXQ4	647 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	FAM98C	Q17RN3	349 aa	Known RBP	13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	ANKRD44	Q8N8A2	993 aa		13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	LRRFIP2	Q9Y608	721 aa	Known RBP	13.66	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	PAPPA	Q13219	1627 aa		13.65	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	MARCH10	Q8NA82	808 aa	Predicted RBP	13.65	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	RNF214	Q8ND24	703 aa		13.65	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	GCC1	Q96CN9	775 aa		13.65	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	ATG3	Q9NT62	314 aa		13.65	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	CDC45	O75419	566 aa		13.65	□□□□□ -0.22
U2AF1L4-210	ENST00000588892	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	SYCE3	A1L190	88 aa		13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	DDB1	Q16531	1140 aa		13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	UNC5CL	Q8IV45	518 aa		13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	JARID2	Q92833	1246 aa	Predicted RBP	13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	PDLIM2	Q96JY6	352 aa		13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	SLC4A9	Q96Q91	983 aa		13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	SRCIN1	Q9C0H9	1055 aa		13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	SMARCA5	O60264	1052 aa	Predicted RBP	13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	ZNF500	O60304	480 aa	Predicted RBP	13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	KSR2	Q6VAB6	950 aa		13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	MPND	Q8N594	471 aa		13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	HYPK	Q9NX55	129 aa		13.64	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	NWD2	Q9ULI1	1742 aa		13.63	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	CYP2E1	P05181	493 aa	Predicted RBP	13.63	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	FAM182B	Q5T319	152 aa		13.63	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	PRDM10	Q9NQV6	1147 aa		13.63	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	TMEM63C	Q9P1W3	806 aa		13.63	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	DOT1L	Q8TEK3	1739 aa		13.63	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	TNS2	Q63HR2	1409 aa		13.63	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	GNAI2	P04899	355 aa		13.63	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	CHMP4B	Q9H444	224 aa	Known RBP	13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms