RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 KIAA1551Q9HCM1 1747 aa15.17■□□□□ 0.02
RFX1-204ENST00000588885 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
RFX1-204ENST00000588885 LAS1LQ9Y4W2 734 aaKnown RBP15.17■□□□□ 0.02
RFX1-204ENST00000588885 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
RFX1-204ENST00000588885 NPHP1O15259 732 aa15.16■□□□□ 0.02
RFX1-204ENST00000588885 C2CD5Q86YS7 1000 aa15.16■□□□□ 0.02
RFX1-204ENST00000588885 SETDB2Q96T68 719 aa15.16■□□□□ 0.02
RFX1-204ENST00000588885 AFDNP55196 1824 aaKnown RBP15.15■□□□□ 0.02
RFX1-204ENST00000588885 MYL6BP14649 208 aa15.15■□□□□ 0.02
RFX1-204ENST00000588885 LMOD3Q0VAK6 560 aa15.15■□□□□ 0.02
RFX1-204ENST00000588885 FAM177BA6PVY3 158 aa15.14■□□□□ 0.01
RFX1-204ENST00000588885 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
RFX1-204ENST00000588885 EIF2S2P20042 333 aaKnown RBP15.14■□□□□ 0.01
RFX1-204ENST00000588885 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
RFX1-204ENST00000588885 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
RFX1-204ENST00000588885 H0YIN7 160 aa15.13■□□□□ 0.01
RFX1-204ENST00000588885 HLFQ16534 295 aa15.13■□□□□ 0.01
RFX1-204ENST00000588885 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
RFX1-204ENST00000588885 PRR5LQ6MZQ0 368 aa15.13■□□□□ 0.01
RFX1-204ENST00000588885 NECTIN2Q92692 538 aa15.13■□□□□ 0.01
RFX1-204ENST00000588885 TTLL7Q6ZT98 887 aa15.12■□□□□ 0.01
RFX1-204ENST00000588885 NBPF5PQ86XG9 351 aaPredicted RBP15.12■□□□□ 0.01
RFX1-204ENST00000588885 CNBD1Q8NA66 436 aa15.12■□□□□ 0.01
RFX1-204ENST00000588885 ZNF622Q969S3 477 aaKnown RBP eCLIP15.12■□□□□ 0.01
RFX1-204ENST00000588885 ZNF652Q9Y2D9 606 aa15.12■□□□□ 0.01
RFX1-204ENST00000588885 CCDC88AQ3V6T2 1871 aa15.12■□□□□ 0.01
RFX1-204ENST00000588885 APAF1O14727 1248 aa15.11■□□□□ 0.01
RFX1-204ENST00000588885 KRT24Q2M2I5 525 aa15.11■□□□□ 0.01
RFX1-204ENST00000588885 CLEC4GQ6UXB4 293 aa15.11■□□□□ 0.01
RFX1-204ENST00000588885 BRIP1Q9BX63 1249 aa15.11■□□□□ 0.01
RFX1-204ENST00000588885 NIP7Q9Y221 180 aaKnown RBP eCLIP15.11■□□□□ 0.01
RFX1-204ENST00000588885 ADCY9O60503 1353 aa15.11■□□□□ 0.01
RFX1-204ENST00000588885 CACNA1SQ13698 1873 aa15.1■□□□□ 0.01
RFX1-204ENST00000588885 ANXA1P04083 346 aa15.1■□□□□ 0.01
RFX1-204ENST00000588885 TTLL6Q8N841 843 aa15.1■□□□□ 0.01
RFX1-204ENST00000588885 CHL1O00533 1208 aa15.09■□□□□ 0.01
RFX1-204ENST00000588885 PDE6BP35913 854 aa15.09■□□□□ 0.01
RFX1-204ENST00000588885 ST5P78524 1137 aa15.09■□□□□ 0.01
RFX1-204ENST00000588885 C9orf131Q5VYM1 1079 aa15.09■□□□□ 0.01
RFX1-204ENST00000588885 KIF6Q6ZMV9 814 aa15.09■□□□□ 0.01
RFX1-204ENST00000588885 ZBTB3Q9H5J0 574 aa15.09■□□□□ 0.01
RFX1-204ENST00000588885 BABAM1Q9NWV8 329 aa15.09■□□□□ 0.01
RFX1-204ENST00000588885 SBF1O95248 1867 aa15.09■□□□□ 0.01
RFX1-204ENST00000588885 DLG5Q8TDM6 1919 aa15.08■□□□□ 0
RFX1-204ENST00000588885 PROSER3Q2NL68 480 aa15.08■□□□□ 0
RFX1-204ENST00000588885 DLEC1Q9Y238 1755 aa15.08■□□□□ 0
RFX1-204ENST00000588885 GPTP24298 496 aa15.07■□□□□ 0
RFX1-204ENST00000588885 GTF2E1P29083 439 aaPredicted RBP15.07■□□□□ 0
RFX1-204ENST00000588885 RASSF7Q02833 373 aa15.07■□□□□ 0
RFX1-204ENST00000588885 PDIA6Q15084 440 aa15.07■□□□□ 0
RFX1-204ENST00000588885 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
RFX1-204ENST00000588885 CCER2I3L3R5 266 aa15.06■□□□□ 0
RFX1-204ENST00000588885 C21orf2O43822 256 aa15.06■□□□□ 0
RFX1-204ENST00000588885 AIMP1Q12904 312 aaKnown RBP15.06■□□□□ 0
RFX1-204ENST00000588885 RNF181Q9P0P0 153 aa15.06■□□□□ 0
RFX1-204ENST00000588885 MAP3K15Q6ZN16 1313 aa15.06■□□□□ 0
RFX1-204ENST00000588885 ERVV-1B6SEH8 477 aa15.05■□□□□ -0
RFX1-204ENST00000588885 C16orf71Q8IYS4 520 aaPredicted RBP15.05■□□□□ -0
RFX1-204ENST00000588885 SCN7AQ01118 1682 aa15.05■□□□□ -0
RFX1-204ENST00000588885 SRGNP10124 158 aa15.04■□□□□ -0
RFX1-204ENST00000588885 NUTM1Q86Y26 1132 aa15.04■□□□□ -0
RFX1-204ENST00000588885 CFAP44Q96MT7 982 aa15.04■□□□□ -0
RFX1-204ENST00000588885 MRS2Q9HD23 443 aa15.04■□□□□ -0
RFX1-204ENST00000588885 MBIPQ9NS73 344 aa15.04■□□□□ -0
RFX1-204ENST00000588885 PDZRN3Q9UPQ7 1066 aa15.04■□□□□ -0
RFX1-204ENST00000588885 NRXN2Q9P2S2 1712 aa15.03■□□□□ -0
RFX1-204ENST00000588885 ERBB4Q15303 1308 aa15.03■□□□□ -0
RFX1-204ENST00000588885 ERFEQ4G0M1 354 aa15.03■□□□□ -0
RFX1-204ENST00000588885 COPS6Q7L5N1 327 aa15.03■□□□□ -0
RFX1-204ENST00000588885 LRP10Q7Z4F1 713 aa15.03■□□□□ -0
RFX1-204ENST00000588885 XAGE3Q8WTP9 111 aa15.03■□□□□ -0
RFX1-204ENST00000588885 ZNF428Q96B54 188 aa15.03■□□□□ -0
RFX1-204ENST00000588885 MASTLQ96GX5 879 aa15.03■□□□□ -0
RFX1-204ENST00000588885 KDM3BQ7LBC6 1761 aa15.03■□□□□ -0
RFX1-204ENST00000588885 TNRC6CQ9HCJ0 1690 aaKnown RBP15.03■□□□□ -0
RFX1-204ENST00000588885 ELL2O00472 640 aaPredicted RBP15.02■□□□□ -0
RFX1-204ENST00000588885 RGL2O15211 777 aa15.02■□□□□ -0
RFX1-204ENST00000588885 HSPA6P17066 643 aa15.02■□□□□ -0
RFX1-204ENST00000588885 PRELPP51888 382 aa15.02■□□□□ -0
RFX1-204ENST00000588885 HDGFL1Q5TGJ6 251 aa15.02■□□□□ -0
RFX1-204ENST00000588885 SUSD4Q5VX71 490 aa15.02■□□□□ -0
RFX1-204ENST00000588885 DUSP27Q5VZP5 1158 aa15.02■□□□□ -0
RFX1-204ENST00000588885 STYK1Q6J9G0 422 aa15.02■□□□□ -0
RFX1-204ENST00000588885 PRPF40BQ6NWY9 871 aaKnown RBP15.02■□□□□ -0
RFX1-204ENST00000588885 CNKSR1Q969H4 720 aa15.02■□□□□ -0
RFX1-204ENST00000588885 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
RFX1-204ENST00000588885 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
RFX1-204ENST00000588885 TIAM2Q8IVF5 1701 aa15.01□□□□□ -0.01
RFX1-204ENST00000588885 UBN2Q6ZU65 1347 aa15.01□□□□□ -0.01
RFX1-204ENST00000588885 NFKBIEO00221 500 aa15.01□□□□□ -0.01
RFX1-204ENST00000588885 GIGYF2Q6Y7W6 1299 aaKnown RBP15.01□□□□□ -0.01
RFX1-204ENST00000588885 ZNF34Q8IZ26 560 aa15.01□□□□□ -0.01
RFX1-204ENST00000588885 NMRK2Q9NPI5 230 aa15.01□□□□□ -0.01
RFX1-204ENST00000588885 ANKRD31Q8N7Z5 1873 aa15.01□□□□□ -0.01
RFX1-204ENST00000588885 KDM2BQ8NHM5 1336 aa15□□□□□ -0.01
RFX1-204ENST00000588885 KIF3CO14782 793 aa15□□□□□ -0.01
RFX1-204ENST00000588885 ZNF853P0CG23 659 aa15□□□□□ -0.01
RFX1-204ENST00000588885 NPR1P16066 1061 aa15□□□□□ -0.01
RFX1-204ENST00000588885 LMNB1P20700 586 aa15□□□□□ -0.01
RFX1-204ENST00000588885 GNAI1P63096 354 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms