RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 DICER1Q9UPY3 1922 aaKnown RBP22.42■■□□□ 1.18
SEC11C-205ENST00000588875 U2SURPO15042 1029 aaKnown RBP22.42■■□□□ 1.18
SEC11C-205ENST00000588875 ST5P78524 1137 aa22.42■■□□□ 1.18
SEC11C-205ENST00000588875 DZIP3Q86Y13 1208 aaKnown RBP22.42■■□□□ 1.18
SEC11C-205ENST00000588875 SLX4Q8IY92 1834 aa22.42■■□□□ 1.18
SEC11C-205ENST00000588875 PASKQ96RG2 1323 aa22.41■■□□□ 1.18
SEC11C-205ENST00000588875 NPHP1O15259 732 aa22.41■■□□□ 1.18
SEC11C-205ENST00000588875 PIP4K2AP48426 406 aaPredicted RBP22.41■■□□□ 1.18
SEC11C-205ENST00000588875 SOGA3Q5TF21 947 aa22.41■■□□□ 1.18
SEC11C-205ENST00000588875 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
SEC11C-205ENST00000588875 COL3A1P02461 1466 aaPredicted RBP22.41■■□□□ 1.18
SEC11C-205ENST00000588875 FOXN1O15353 648 aa22.4■■□□□ 1.18
SEC11C-205ENST00000588875 NPM2Q86SE8 214 aaKnown RBP22.4■■□□□ 1.18
SEC11C-205ENST00000588875 L3MBTL3Q96JM7 780 aaPredicted RBP22.4■■□□□ 1.18
SEC11C-205ENST00000588875 TAF1DQ9H5J8 278 aaPredicted RBP22.4■■□□□ 1.18
SEC11C-205ENST00000588875 CNTNAP1P78357 1384 aa22.39■■□□□ 1.18
SEC11C-205ENST00000588875 CEMIPQ8WUJ3 1361 aa22.39■■□□□ 1.18
SEC11C-205ENST00000588875 PHACTR3Q96KR7 559 aa22.39■■□□□ 1.17
SEC11C-205ENST00000588875 PRAMEF22A3QJZ6 481 aa22.38■■□□□ 1.17
SEC11C-205ENST00000588875 IQCA1LA6NCM1 817 aa22.38■■□□□ 1.17
SEC11C-205ENST00000588875 BTBD11A6QL63 1104 aa22.38■■□□□ 1.17
SEC11C-205ENST00000588875 LDHDQ86WU2 507 aa22.38■■□□□ 1.17
SEC11C-205ENST00000588875 ITGBL1O95965 494 aaPredicted RBP22.37■■□□□ 1.17
SEC11C-205ENST00000588875 CNGB1Q14028 1251 aaPredicted RBP22.37■■□□□ 1.17
SEC11C-205ENST00000588875 SIPA1L3O60292 1781 aaPredicted RBP22.36■■□□□ 1.17
SEC11C-205ENST00000588875 KLRG2A4D1S0 409 aaPredicted RBP22.36■■□□□ 1.17
SEC11C-205ENST00000588875 CCDC93Q567U6 631 aa22.36■■□□□ 1.17
SEC11C-205ENST00000588875 OLFM4Q6UX06 510 aa22.36■■□□□ 1.17
SEC11C-205ENST00000588875 CLEC4GQ6UXB4 293 aa22.36■■□□□ 1.17
SEC11C-205ENST00000588875 NBPF5PQ86XG9 351 aaPredicted RBP22.36■■□□□ 1.17
SEC11C-205ENST00000588875 ZNF277Q9NRM2 450 aaPredicted RBP22.36■■□□□ 1.17
SEC11C-205ENST00000588875 NPR1P16066 1061 aa22.35■■□□□ 1.17
SEC11C-205ENST00000588875 VEGFBP49765 207 aa22.35■■□□□ 1.17
SEC11C-205ENST00000588875 FKBP4Q02790 459 aaKnown RBP eCLIP22.35■■□□□ 1.17
SEC11C-205ENST00000588875 ZNF541Q9H0D2 1346 aa22.34■■□□□ 1.17
SEC11C-205ENST00000588875 PRDM10Q9NQV6 1147 aa22.34■■□□□ 1.17
SEC11C-205ENST00000588875 TMEM88BA6NKF7 163 aa22.33■■□□□ 1.17
SEC11C-205ENST00000588875 EAPPQ56P03 285 aaPredicted RBP22.33■■□□□ 1.17
SEC11C-205ENST00000588875 NBPF26B4DH59 902 aa22.32■■□□□ 1.16
SEC11C-205ENST00000588875 PRKAR2BP31323 418 aa22.32■■□□□ 1.16
SEC11C-205ENST00000588875 NBPF10Q6P3W6 841 aaKnown RBP22.32■■□□□ 1.16
SEC11C-205ENST00000588875 NBPF15Q8N660 670 aa22.32■■□□□ 1.16
SEC11C-205ENST00000588875 RSPH6AQ9H0K4 717 aa22.32■■□□□ 1.16
SEC11C-205ENST00000588875 NPC1L1Q9UHC9 1359 aa22.31■■□□□ 1.16
SEC11C-205ENST00000588875 TPTE2Q6XPS3 522 aa22.31■■□□□ 1.16
SEC11C-205ENST00000588875 HACL1Q9UJ83 578 aa22.31■■□□□ 1.16
SEC11C-205ENST00000588875 CLEC11AQ9Y240 323 aa22.31■■□□□ 1.16
SEC11C-205ENST00000588875 CACNA1SQ13698 1873 aa22.3■■□□□ 1.16
SEC11C-205ENST00000588875 BCORQ6W2J9 1755 aa22.3■■□□□ 1.16
SEC11C-205ENST00000588875 SNRPA1P09661 255 aaKnown RBP22.3■■□□□ 1.16
SEC11C-205ENST00000588875 EPHX2P34913 555 aa22.3■■□□□ 1.16
SEC11C-205ENST00000588875 CTCFP49711 727 aaPredicted RBP22.3■■□□□ 1.16
SEC11C-205ENST00000588875 WBP1LQ9NX94 342 aa22.3■■□□□ 1.16
SEC11C-205ENST00000588875 NIP7Q9Y221 180 aaKnown RBP eCLIP22.3■■□□□ 1.16
SEC11C-205ENST00000588875 ZNF652Q9Y2D9 606 aa22.3■■□□□ 1.16
SEC11C-205ENST00000588875 ARFGEF2Q9Y6D5 1785 aa22.3■■□□□ 1.16
SEC11C-205ENST00000588875 FAM177BA6PVY3 158 aa22.29■■□□□ 1.16
SEC11C-205ENST00000588875 MCM10Q7L590 875 aa22.29■■□□□ 1.16
SEC11C-205ENST00000588875 RTKN2Q8IZC4 609 aa22.29■■□□□ 1.16
SEC11C-205ENST00000588875 SCN4AP35499 1836 aa22.29■■□□□ 1.16
SEC11C-205ENST00000588875 FZD9O00144 591 aa22.28■■□□□ 1.16
SEC11C-205ENST00000588875 SYNE4Q8N205 404 aa22.28■■□□□ 1.16
SEC11C-205ENST00000588875 AIDAQ96BJ3 306 aa22.28■■□□□ 1.16
SEC11C-205ENST00000588875 RNF123Q5XPI4 1314 aa22.28■■□□□ 1.16
SEC11C-205ENST00000588875 IARSP41252 1262 aaKnown RBP22.27■■□□□ 1.16
SEC11C-205ENST00000588875 HLFQ16534 295 aa22.27■■□□□ 1.16
SEC11C-205ENST00000588875 MAP1SQ66K74 1059 aaPredicted RBP22.27■■□□□ 1.16
SEC11C-205ENST00000588875 CNTROBQ8N137 903 aa22.27■■□□□ 1.16
SEC11C-205ENST00000588875 RGL2O15211 777 aa22.26■■□□□ 1.15
SEC11C-205ENST00000588875 LBX1P52954 281 aa22.26■■□□□ 1.15
SEC11C-205ENST00000588875 RASSF10A6NK89 507 aa22.25■■□□□ 1.15
SEC11C-205ENST00000588875 ALDH1B1P30837 517 aa22.25■■□□□ 1.15
SEC11C-205ENST00000588875 DCTN1Q14203 1278 aa22.25■■□□□ 1.15
SEC11C-205ENST00000588875 PNMA8AQ86V59 439 aaPredicted RBP22.25■■□□□ 1.15
SEC11C-205ENST00000588875 DEFB115Q30KQ5 88 aa22.24■■□□□ 1.15
SEC11C-205ENST00000588875 GPC2Q8N158 579 aa22.24■■□□□ 1.15
SEC11C-205ENST00000588875 ADAMTSL1Q8N6G6 1762 aa22.24■■□□□ 1.15
SEC11C-205ENST00000588875 RTF1Q92541 710 aaKnown RBP22.23■■□□□ 1.15
SEC11C-205ENST00000588875 SNED1Q8TER0 1413 aa22.23■■□□□ 1.15
SEC11C-205ENST00000588875 HSPA8P11142 646 aaKnown RBP22.21■■□□□ 1.15
SEC11C-205ENST00000588875 CRY2Q49AN0 593 aa22.21■■□□□ 1.15
SEC11C-205ENST00000588875 CFAP53Q96M91 514 aa22.21■■□□□ 1.15
SEC11C-205ENST00000588875 PSMD1Q99460 953 aa22.21■■□□□ 1.15
SEC11C-205ENST00000588875 U2AF1L5P0DN76 240 aaPredicted RBP22.2■■□□□ 1.14
SEC11C-205ENST00000588875 GTF2E1P29083 439 aaPredicted RBP22.2■■□□□ 1.14
SEC11C-205ENST00000588875 U2AF1Q01081 240 aaKnown RBP eCLIP22.2■■□□□ 1.14
SEC11C-205ENST00000588875 NUTM1Q86Y26 1132 aa22.2■■□□□ 1.14
SEC11C-205ENST00000588875 JDP2Q8WYK2 163 aa22.2■■□□□ 1.14
SEC11C-205ENST00000588875 MIS18AQ9NYP9 233 aa22.2■■□□□ 1.14
SEC11C-205ENST00000588875 WDR33Q9C0J8 1336 aaKnown RBP22.2■■□□□ 1.14
SEC11C-205ENST00000588875 FMR1Q06787 632 aaKnown RBP eCLIP22.19■■□□□ 1.14
SEC11C-205ENST00000588875 TAF7Q15545 349 aaPredicted RBP22.19■■□□□ 1.14
SEC11C-205ENST00000588875 NUDCQ9Y266 331 aa22.19■■□□□ 1.14
SEC11C-205ENST00000588875 GJA3Q9Y6H8 435 aa22.19■■□□□ 1.14
SEC11C-205ENST00000588875 ABCC12Q96J65 1359 aa22.19■■□□□ 1.14
SEC11C-205ENST00000588875 COL4A5P29400 1685 aa22.18■■□□□ 1.14
SEC11C-205ENST00000588875 HTATSF1O43719 755 aaKnown RBP22.18■■□□□ 1.14
SEC11C-205ENST00000588875 SLC51AQ86UW1 340 aa22.18■■□□□ 1.14
SEC11C-205ENST00000588875 NGEFQ8N5V2 710 aa22.18■■□□□ 1.14
SEC11C-205ENST00000588875 DDX21Q9NR30 783 aaKnown RBP eCLIP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms