RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 TBC1D2BQ9UPU7 963 aa18.32■□□□□ 0.52
NPC1-207ENST00000588867 ZBTB7BO15156 539 aaPredicted RBP18.31■□□□□ 0.52
NPC1-207ENST00000588867 NEXNQ0ZGT2 675 aa18.31■□□□□ 0.52
NPC1-207ENST00000588867 BEND3Q5T5X7 828 aa18.31■□□□□ 0.52
NPC1-207ENST00000588867 RC3H1Q5TC82 1133 aaKnown RBP18.31■□□□□ 0.52
NPC1-207ENST00000588867 MYD88Q99836 296 aa18.31■□□□□ 0.52
NPC1-207ENST00000588867 TAF1LQ8IZX4 1826 aa18.31■□□□□ 0.52
NPC1-207ENST00000588867 GNPATO15228 680 aa18.3■□□□□ 0.52
NPC1-207ENST00000588867 SF3B2Q13435 895 aaKnown RBP18.3■□□□□ 0.52
NPC1-207ENST00000588867 DZIP3Q86Y13 1208 aaKnown RBP18.3■□□□□ 0.52
NPC1-207ENST00000588867 METTL22Q9BUU2 404 aaPredicted RBP18.3■□□□□ 0.52
NPC1-207ENST00000588867 CHMP4BQ9H444 224 aaKnown RBP18.3■□□□□ 0.52
NPC1-207ENST00000588867 TNS1Q9HBL0 1735 aaKnown RBP18.3■□□□□ 0.52
NPC1-207ENST00000588867 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
NPC1-207ENST00000588867 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
NPC1-207ENST00000588867 AK7Q96M32 723 aa18.29■□□□□ 0.52
NPC1-207ENST00000588867 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 SMIM5Q71RC9 77 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 RTCBQ9Y3I0 505 aaKnown RBP18.28■□□□□ 0.52
NPC1-207ENST00000588867 RREB1Q92766 1687 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 B4GALNT3Q6L9W6 998 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 CCDC136Q96JN2 1154 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 ARFGEF2Q9Y6D5 1785 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 C4BP0C0L5 1744 aa18.28■□□□□ 0.52
NPC1-207ENST00000588867 COL15A1P39059 1388 aa18.27■□□□□ 0.52
NPC1-207ENST00000588867 ATP5J2-PTCD1G3V325 749 aa18.27■□□□□ 0.52
NPC1-207ENST00000588867 EN1Q05925 392 aaPredicted RBP18.27■□□□□ 0.52
NPC1-207ENST00000588867 AAMPQ13685 434 aa18.27■□□□□ 0.52
NPC1-207ENST00000588867 MEIS3Q99687 375 aa18.27■□□□□ 0.52
NPC1-207ENST00000588867 ATP10DQ9P241 1426 aa18.27■□□□□ 0.52
NPC1-207ENST00000588867 ALDH1L1O75891 902 aa18.27■□□□□ 0.51
NPC1-207ENST00000588867 HMGB2P26583 209 aaKnown RBP18.27■□□□□ 0.51
NPC1-207ENST00000588867 A0A087WZG4 1122 aa18.26■□□□□ 0.51
NPC1-207ENST00000588867 IGKV5-2P06315 115 aa18.26■□□□□ 0.51
NPC1-207ENST00000588867 HLFQ16534 295 aa18.26■□□□□ 0.51
NPC1-207ENST00000588867 C1orf115Q9H7X2 142 aa18.26■□□□□ 0.51
NPC1-207ENST00000588867 PHF14O94880 888 aa18.25■□□□□ 0.51
NPC1-207ENST00000588867 EZH2Q15910 746 aaKnown RBP18.25■□□□□ 0.51
NPC1-207ENST00000588867 USP44Q9H0E7 712 aa18.25■□□□□ 0.51
NPC1-207ENST00000588867 C9orf78Q9NZ63 289 aaPredicted RBP18.25■□□□□ 0.51
NPC1-207ENST00000588867 NUP188Q5SRE5 1749 aa18.25■□□□□ 0.51
NPC1-207ENST00000588867 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
NPC1-207ENST00000588867 ERVV-1B6SEH8 477 aa18.25■□□□□ 0.51
NPC1-207ENST00000588867 BAG6P46379 1132 aa18.25■□□□□ 0.51
NPC1-207ENST00000588867 GIGYF2Q6Y7W6 1299 aaKnown RBP18.25■□□□□ 0.51
NPC1-207ENST00000588867 TCIRG1Q13488 830 aa18.24■□□□□ 0.51
NPC1-207ENST00000588867 TRAPPC3LQ5T215 181 aa18.24■□□□□ 0.51
NPC1-207ENST00000588867 N4BP2Q86UW6 1770 aaPredicted RBP18.24■□□□□ 0.51
NPC1-207ENST00000588867 GNAI3P08754 354 aa18.23■□□□□ 0.51
NPC1-207ENST00000588867 AMIGO3Q86WK7 504 aa18.23■□□□□ 0.51
NPC1-207ENST00000588867 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
NPC1-207ENST00000588867 PCDHB15Q9Y5E8 787 aa18.23■□□□□ 0.51
NPC1-207ENST00000588867 DEFB132Q7Z7B7 95 aa18.23■□□□□ 0.51
NPC1-207ENST00000588867 CAMTA2O94983 1202 aa18.22■□□□□ 0.51
NPC1-207ENST00000588867 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
NPC1-207ENST00000588867 UBTFL1P0CB47 393 aaPredicted RBP18.22■□□□□ 0.51
NPC1-207ENST00000588867 GCKRQ14397 625 aa18.22■□□□□ 0.51
NPC1-207ENST00000588867 HSP90AB3PQ58FF7 597 aa18.22■□□□□ 0.51
NPC1-207ENST00000588867 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
NPC1-207ENST00000588867 AFDNP55196 1824 aaKnown RBP18.22■□□□□ 0.51
NPC1-207ENST00000588867 ZPR1O75312 459 aa18.22■□□□□ 0.51
NPC1-207ENST00000588867 GPTP24298 496 aa18.22■□□□□ 0.51
NPC1-207ENST00000588867 RFC4P35249 363 aa18.22■□□□□ 0.51
NPC1-207ENST00000588867 NUP98P52948 1817 aa18.21■□□□□ 0.51
NPC1-207ENST00000588867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
NPC1-207ENST00000588867 CWC25Q9NXE8 425 aaPredicted RBP18.21■□□□□ 0.51
NPC1-207ENST00000588867 TFCP2L1Q9NZI6 479 aa18.21■□□□□ 0.51
NPC1-207ENST00000588867 GRM8O00222 908 aa18.2■□□□□ 0.5
NPC1-207ENST00000588867 GNAI2P04899 355 aa18.2■□□□□ 0.5
NPC1-207ENST00000588867 CCDC125Q86Z20 511 aa18.2■□□□□ 0.5
NPC1-207ENST00000588867 JARID2Q92833 1246 aaPredicted RBP18.2■□□□□ 0.5
NPC1-207ENST00000588867 ISCA1Q9BUE6 129 aa18.2■□□□□ 0.5
NPC1-207ENST00000588867 NARFQ9UHQ1 456 aa18.2■□□□□ 0.5
NPC1-207ENST00000588867 RGPD3A6NKT7 1758 aaPredicted RBP18.2■□□□□ 0.5
NPC1-207ENST00000588867 RGPD4Q7Z3J3 1758 aa18.2■□□□□ 0.5
NPC1-207ENST00000588867 USPL1Q5W0Q7 1092 aa18.2■□□□□ 0.5
NPC1-207ENST00000588867 CCDC191Q8NCU4 936 aa18.2■□□□□ 0.5
NPC1-207ENST00000588867 SRP68Q9UHB9 627 aaKnown RBP18.2■□□□□ 0.5
NPC1-207ENST00000588867 ZNF652Q9Y2D9 606 aa18.2■□□□□ 0.5
NPC1-207ENST00000588867 ZNF827Q17R98 1081 aa18.19■□□□□ 0.5
NPC1-207ENST00000588867 LRRFIP2Q9Y608 721 aaKnown RBP18.19■□□□□ 0.5
NPC1-207ENST00000588867 ADRA2BP18089 450 aa18.18■□□□□ 0.5
NPC1-207ENST00000588867 RTL5Q5HYW3 569 aaPredicted RBP18.18■□□□□ 0.5
NPC1-207ENST00000588867 AKT1S1Q96B36 256 aa18.18■□□□□ 0.5
NPC1-207ENST00000588867 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
NPC1-207ENST00000588867 SSFA2P28290 1259 aa18.18■□□□□ 0.5
NPC1-207ENST00000588867 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
NPC1-207ENST00000588867 CLEC4GQ6UXB4 293 aa18.17■□□□□ 0.5
NPC1-207ENST00000588867 UBE3BQ7Z3V4 1068 aa18.17■□□□□ 0.5
NPC1-207ENST00000588867 ZNF34Q8IZ26 560 aa18.17■□□□□ 0.5
NPC1-207ENST00000588867 NIP7Q9Y221 180 aaKnown RBP eCLIP18.17■□□□□ 0.5
NPC1-207ENST00000588867 IGHDP01880 384 aa18.16■□□□□ 0.5
NPC1-207ENST00000588867 NLRP10Q86W26 655 aa18.16■□□□□ 0.5
NPC1-207ENST00000588867 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
NPC1-207ENST00000588867 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
NPC1-207ENST00000588867 MSH5O43196 834 aa18.16■□□□□ 0.5
NPC1-207ENST00000588867 BICDL1Q6ZP65 573 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms