RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 RIC3Q7Z5B4 369 aa28.7■■■□□ 2.19
ACTN4-210ENST00000588618 ANKRD13DQ6ZTN6 518 aa28.69■■■□□ 2.18
ACTN4-210ENST00000588618 EIF5P55010 431 aaKnown RBP28.69■■■□□ 2.18
ACTN4-210ENST00000588618 SLC4A10Q6U841 1118 aa28.69■■■□□ 2.18
ACTN4-210ENST00000588618 RTCBQ9Y3I0 505 aaKnown RBP28.69■■■□□ 2.18
ACTN4-210ENST00000588618 EZH2Q15910 746 aaKnown RBP28.68■■■□□ 2.18
ACTN4-210ENST00000588618 KSR2Q6VAB6 950 aa28.68■■■□□ 2.18
ACTN4-210ENST00000588618 AMIGO3Q86WK7 504 aa28.67■■■□□ 2.18
ACTN4-210ENST00000588618 CAMKK2Q96RR4 588 aa28.67■■■□□ 2.18
ACTN4-210ENST00000588618 UBR3Q6ZT12 1888 aa28.67■■■□□ 2.18
ACTN4-210ENST00000588618 PXDNLA1KZ92 1463 aa28.67■■■□□ 2.18
ACTN4-210ENST00000588618 MVPQ14764 893 aaKnown RBP28.66■■■□□ 2.18
ACTN4-210ENST00000588618 SMIM5Q71RC9 77 aa28.66■■■□□ 2.18
ACTN4-210ENST00000588618 DNAAF4Q8WXU2 420 aa28.66■■■□□ 2.18
ACTN4-210ENST00000588618 MAP3K2Q9Y2U5 619 aa28.66■■■□□ 2.18
ACTN4-210ENST00000588618 A0A087WZG4 1122 aa28.66■■■□□ 2.18
ACTN4-210ENST00000588618 RPS6KA4O75676 772 aa28.66■■■□□ 2.18
ACTN4-210ENST00000588618 INTS3Q68E01 1043 aaKnown RBP28.66■■■□□ 2.18
ACTN4-210ENST00000588618 DEFB132Q7Z7B7 95 aa28.66■■■□□ 2.18
ACTN4-210ENST00000588618 PLBD2Q8NHP8 589 aa28.66■■■□□ 2.18
ACTN4-210ENST00000588618 COL15A1P39059 1388 aa28.66■■■□□ 2.18
ACTN4-210ENST00000588618 DZIP3Q86Y13 1208 aaKnown RBP28.65■■■□□ 2.18
ACTN4-210ENST00000588618 ITPRIPQ8IWB1 547 aa28.64■■■□□ 2.18
ACTN4-210ENST00000588618 NEXNQ0ZGT2 675 aa28.63■■■□□ 2.17
ACTN4-210ENST00000588618 ZBTB3Q9H5J0 574 aa28.63■■■□□ 2.17
ACTN4-210ENST00000588618 NUP98P52948 1817 aa28.62■■■□□ 2.17
ACTN4-210ENST00000588618 C4AP0C0L4 1744 aa28.62■■■□□ 2.17
ACTN4-210ENST00000588618 CCT4P50991 539 aaKnown RBP28.62■■■□□ 2.17
ACTN4-210ENST00000588618 TBC1D2BQ9UPU7 963 aa28.62■■■□□ 2.17
ACTN4-210ENST00000588618 MAP3K15Q6ZN16 1313 aa28.61■■■□□ 2.17
ACTN4-210ENST00000588618 TUBGCP6Q96RT7 1819 aa28.61■■■□□ 2.17
ACTN4-210ENST00000588618 BCORQ6W2J9 1755 aa28.61■■■□□ 2.17
ACTN4-210ENST00000588618 ATP10DQ9P241 1426 aa28.61■■■□□ 2.17
ACTN4-210ENST00000588618 PHF14O94880 888 aa28.6■■■□□ 2.17
ACTN4-210ENST00000588618 BEND3Q5T5X7 828 aa28.6■■■□□ 2.17
ACTN4-210ENST00000588618 TFCP2L1Q9NZI6 479 aa28.6■■■□□ 2.17
ACTN4-210ENST00000588618 AFDNP55196 1824 aaKnown RBP28.6■■■□□ 2.17
ACTN4-210ENST00000588618 TRAPPC3LQ5T215 181 aa28.6■■■□□ 2.17
ACTN4-210ENST00000588618 ADRA2BP18089 450 aa28.59■■■□□ 2.17
ACTN4-210ENST00000588618 UPF1Q92900 1129 aaKnown RBP eCLIP28.58■■■□□ 2.17
ACTN4-210ENST00000588618 METTL22Q9BUU2 404 aaPredicted RBP28.58■■■□□ 2.17
ACTN4-210ENST00000588618 SRCIN1Q9C0H9 1055 aa28.58■■■□□ 2.17
ACTN4-210ENST00000588618 DDX19BQ9UMR2 479 aa28.58■■■□□ 2.17
ACTN4-210ENST00000588618 ANKRD36CQ5JPF3 1778 aa28.58■■■□□ 2.17
ACTN4-210ENST00000588618 ERVV-1B6SEH8 477 aa28.57■■■□□ 2.16
ACTN4-210ENST00000588618 ZPR1O75312 459 aa28.57■■■□□ 2.16
ACTN4-210ENST00000588618 IGKV5-2P06315 115 aa28.57■■■□□ 2.16
ACTN4-210ENST00000588618 SSFA2P28290 1259 aa28.57■■■□□ 2.16
ACTN4-210ENST00000588618 RFC4P35249 363 aa28.57■■■□□ 2.16
ACTN4-210ENST00000588618 HLFQ16534 295 aa28.57■■■□□ 2.16
ACTN4-210ENST00000588618 MYD88Q99836 296 aa28.57■■■□□ 2.16
ACTN4-210ENST00000588618 CHMP4BQ9H444 224 aaKnown RBP28.57■■■□□ 2.16
ACTN4-210ENST00000588618 SCN7AQ01118 1682 aa28.56■■■□□ 2.16
ACTN4-210ENST00000588618 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.56■■■□□ 2.16
ACTN4-210ENST00000588618 ZBTB7BO15156 539 aaPredicted RBP28.56■■■□□ 2.16
ACTN4-210ENST00000588618 ZNF827Q17R98 1081 aa28.56■■■□□ 2.16
ACTN4-210ENST00000588618 ZNF652Q9Y2D9 606 aa28.56■■■□□ 2.16
ACTN4-210ENST00000588618 CWF19L2Q2TBE0 894 aaKnown RBP28.55■■■□□ 2.16
ACTN4-210ENST00000588618 HSP90AB3PQ58FF7 597 aa28.55■■■□□ 2.16
ACTN4-210ENST00000588618 STK32BQ9NY57 414 aa28.55■■■□□ 2.16
ACTN4-210ENST00000588618 LINS1Q8NG48 757 aa28.55■■■□□ 2.16
ACTN4-210ENST00000588618 ARHGEF1Q92888 912 aaKnown RBP28.55■■■□□ 2.16
ACTN4-210ENST00000588618 AKT1S1Q96B36 256 aa28.55■■■□□ 2.16
ACTN4-210ENST00000588618 CAMTA2O94983 1202 aa28.54■■■□□ 2.16
ACTN4-210ENST00000588618 GIGYF2Q6Y7W6 1299 aaKnown RBP28.54■■■□□ 2.16
ACTN4-210ENST00000588618 MEIS3Q99687 375 aa28.53■■■□□ 2.16
ACTN4-210ENST00000588618 NARFQ9UHQ1 456 aa28.53■■■□□ 2.16
ACTN4-210ENST00000588618 ATP5J2-PTCD1G3V325 749 aa28.52■■■□□ 2.16
ACTN4-210ENST00000588618 ERICH6BQ5W0A0 696 aa28.52■■■□□ 2.16
ACTN4-210ENST00000588618 FLAD1Q8NFF5 587 aa28.52■■■□□ 2.16
ACTN4-210ENST00000588618 ZBTB40Q9NUA8 1239 aa28.52■■■□□ 2.16
ACTN4-210ENST00000588618 ALDH1L1O75891 902 aa28.52■■■□□ 2.16
ACTN4-210ENST00000588618 TCIRG1Q13488 830 aa28.52■■■□□ 2.16
ACTN4-210ENST00000588618 NEURL1BA8MQ27 555 aa28.51■■■□□ 2.15
ACTN4-210ENST00000588618 ILDR2Q71H61 639 aa28.51■■■□□ 2.15
ACTN4-210ENST00000588618 USP44Q9H0E7 712 aa28.5■■■□□ 2.15
ACTN4-210ENST00000588618 ANO8Q9HCE9 1232 aaPredicted RBP28.5■■■□□ 2.15
ACTN4-210ENST00000588618 MSH5O43196 834 aa28.49■■■□□ 2.15
ACTN4-210ENST00000588618 SLC15A2Q16348 729 aa28.49■■■□□ 2.15
ACTN4-210ENST00000588618 CLEC4GQ6UXB4 293 aa28.49■■■□□ 2.15
ACTN4-210ENST00000588618 SRP68Q9UHB9 627 aaKnown RBP28.49■■■□□ 2.15
ACTN4-210ENST00000588618 USPL1Q5W0Q7 1092 aa28.49■■■□□ 2.15
ACTN4-210ENST00000588618 ISCA1Q9BUE6 129 aa28.49■■■□□ 2.15
ACTN4-210ENST00000588618 BCL2L12Q9HB09 334 aa28.48■■■□□ 2.15
ACTN4-210ENST00000588618 C9orf78Q9NZ63 289 aaPredicted RBP28.48■■■□□ 2.15
ACTN4-210ENST00000588618 USP42Q9H9J4 1324 aaKnown RBP28.48■■■□□ 2.15
ACTN4-210ENST00000588618 RGL2O15211 777 aa28.47■■■□□ 2.15
ACTN4-210ENST00000588618 AAMPQ13685 434 aa28.46■■■□□ 2.15
ACTN4-210ENST00000588618 C1orf115Q9H7X2 142 aa28.46■■■□□ 2.15
ACTN4-210ENST00000588618 GCKRQ14397 625 aa28.46■■■□□ 2.15
ACTN4-210ENST00000588618 CCDC191Q8NCU4 936 aa28.46■■■□□ 2.15
ACTN4-210ENST00000588618 CWC25Q9NXE8 425 aaPredicted RBP28.46■■■□□ 2.15
ACTN4-210ENST00000588618 IBTKQ9P2D0 1353 aaPredicted RBP28.45■■■□□ 2.14
ACTN4-210ENST00000588618 NBPF7P0C2Y1 421 aaPredicted RBP28.45■■■□□ 2.14
ACTN4-210ENST00000588618 GPTP24298 496 aa28.45■■■□□ 2.14
ACTN4-210ENST00000588618 PCDHB15Q9Y5E8 787 aa28.45■■■□□ 2.14
ACTN4-210ENST00000588618 GNAI3P08754 354 aa28.44■■■□□ 2.14
ACTN4-210ENST00000588618 UBN2Q6ZU65 1347 aa28.44■■■□□ 2.14
ACTN4-210ENST00000588618 NIP7Q9Y221 180 aaKnown RBP eCLIP28.43■■■□□ 2.14
ACTN4-210ENST00000588618 QSER1Q2KHR3 1735 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms