RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 C2CD5Q86YS7 1000 aa11.56□□□□□ -0.56
SDF2-207ENST00000588472 DNAJC5GQ8N7S2 189 aa11.56□□□□□ -0.56
SDF2-207ENST00000588472 ZNF652Q9Y2D9 606 aa11.56□□□□□ -0.56
SDF2-207ENST00000588472 H0YIN7 160 aa11.55□□□□□ -0.56
SDF2-207ENST00000588472 ANXA1P04083 346 aa11.55□□□□□ -0.56
SDF2-207ENST00000588472 HLFQ16534 295 aa11.55□□□□□ -0.56
SDF2-207ENST00000588472 KIF6Q6ZMV9 814 aa11.55□□□□□ -0.56
SDF2-207ENST00000588472 TTLL7Q6ZT98 887 aa11.55□□□□□ -0.56
SDF2-207ENST00000588472 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
SDF2-207ENST00000588472 NIP7Q9Y221 180 aaKnown RBP eCLIP11.55□□□□□ -0.56
SDF2-207ENST00000588472 KIF13BQ9NQT8 1826 aa11.55□□□□□ -0.56
SDF2-207ENST00000588472 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
SDF2-207ENST00000588472 AFDNP55196 1824 aaKnown RBP11.54□□□□□ -0.56
SDF2-207ENST00000588472 CHL1O00533 1208 aa11.54□□□□□ -0.56
SDF2-207ENST00000588472 PRR5LQ6MZQ0 368 aa11.54□□□□□ -0.56
SDF2-207ENST00000588472 NBPF5PQ86XG9 351 aaPredicted RBP11.54□□□□□ -0.56
SDF2-207ENST00000588472 C16orf71Q8IYS4 520 aaPredicted RBP11.54□□□□□ -0.56
SDF2-207ENST00000588472 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
SDF2-207ENST00000588472 ZBTB3Q9H5J0 574 aa11.54□□□□□ -0.56
SDF2-207ENST00000588472 BABAM1Q9NWV8 329 aa11.54□□□□□ -0.56
SDF2-207ENST00000588472 ZNF219Q9P2Y4 722 aaPredicted RBP11.54□□□□□ -0.56
SDF2-207ENST00000588472 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
SDF2-207ENST00000588472 KIAA1551Q9HCM1 1747 aa11.54□□□□□ -0.56
SDF2-207ENST00000588472 SCN7AQ01118 1682 aa11.53□□□□□ -0.56
SDF2-207ENST00000588472 GTF2E1P29083 439 aaPredicted RBP11.53□□□□□ -0.56
SDF2-207ENST00000588472 ST5P78524 1137 aa11.53□□□□□ -0.56
SDF2-207ENST00000588472 AIMP1Q12904 312 aaKnown RBP11.53□□□□□ -0.56
SDF2-207ENST00000588472 LAMB4A4D0S4 1761 aa11.52□□□□□ -0.57
SDF2-207ENST00000588472 GPTP24298 496 aa11.52□□□□□ -0.57
SDF2-207ENST00000588472 PDE6BP35913 854 aa11.52□□□□□ -0.57
SDF2-207ENST00000588472 PROSER3Q2NL68 480 aa11.52□□□□□ -0.57
SDF2-207ENST00000588472 CLEC4GQ6UXB4 293 aa11.52□□□□□ -0.57
SDF2-207ENST00000588472 RBM46Q8TBY0 533 aaKnown RBP11.52□□□□□ -0.57
SDF2-207ENST00000588472 BRIP1Q9BX63 1249 aa11.52□□□□□ -0.57
SDF2-207ENST00000588472 NMRK2Q9NPI5 230 aa11.52□□□□□ -0.57
SDF2-207ENST00000588472 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
SDF2-207ENST00000588472 ELL2O00472 640 aaPredicted RBP11.51□□□□□ -0.57
SDF2-207ENST00000588472 FAM9BQ8IZU0 186 aa11.51□□□□□ -0.57
SDF2-207ENST00000588472 TTLL6Q8N841 843 aa11.51□□□□□ -0.57
SDF2-207ENST00000588472 KLRG1Q96E93 195 aa11.51□□□□□ -0.57
SDF2-207ENST00000588472 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
SDF2-207ENST00000588472 MAP3K15Q6ZN16 1313 aa11.51□□□□□ -0.57
SDF2-207ENST00000588472 BCORQ6W2J9 1755 aa11.5□□□□□ -0.57
SDF2-207ENST00000588472 CAPN15O75808 1086 aa11.5□□□□□ -0.57
SDF2-207ENST00000588472 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
SDF2-207ENST00000588472 FSTL1Q12841 308 aa11.5□□□□□ -0.57
SDF2-207ENST00000588472 PDIA6Q15084 440 aa11.5□□□□□ -0.57
SDF2-207ENST00000588472 COL13A1Q5TAT6 717 aaPredicted RBP11.5□□□□□ -0.57
SDF2-207ENST00000588472 HDGFL1Q5TGJ6 251 aa11.5□□□□□ -0.57
SDF2-207ENST00000588472 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
SDF2-207ENST00000588472 TPTE2Q6XPS3 522 aa11.5□□□□□ -0.57
SDF2-207ENST00000588472 COPS6Q7L5N1 327 aa11.5□□□□□ -0.57
SDF2-207ENST00000588472 ZNF428Q96B54 188 aa11.5□□□□□ -0.57
SDF2-207ENST00000588472 NRXN2Q9P2S2 1712 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 ERVV-1B6SEH8 477 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 GNAI1P63096 354 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 NUTM1Q86Y26 1132 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 TNS4Q8IZW8 715 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 JMYQ8N9B5 988 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 XAGE3Q8WTP9 111 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 IFT57Q9NWB7 429 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 CHPF2Q9P2E5 772 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 ERBB4Q15303 1308 aa11.49□□□□□ -0.57
SDF2-207ENST00000588472 C21orf2O43822 256 aa11.48□□□□□ -0.57
SDF2-207ENST00000588472 HTRA3P83110 453 aa11.48□□□□□ -0.57
SDF2-207ENST00000588472 RASSF7Q02833 373 aa11.48□□□□□ -0.57
SDF2-207ENST00000588472 ERFEQ4G0M1 354 aa11.48□□□□□ -0.57
SDF2-207ENST00000588472 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
SDF2-207ENST00000588472 DDX21Q9NR30 783 aaKnown RBP eCLIP11.48□□□□□ -0.57
SDF2-207ENST00000588472 BRCA1P38398 1863 aaKnown RBP11.48□□□□□ -0.57
SDF2-207ENST00000588472 ANKRD31Q8N7Z5 1873 aa11.47□□□□□ -0.57
SDF2-207ENST00000588472 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
SDF2-207ENST00000588472 ZNF853P0CG23 659 aa11.47□□□□□ -0.57
SDF2-207ENST00000588472 SUSD4Q5VX71 490 aa11.47□□□□□ -0.57
SDF2-207ENST00000588472 C8orf58Q8NAV2 365 aa11.47□□□□□ -0.57
SDF2-207ENST00000588472 TSR2Q969E8 191 aaKnown RBP11.47□□□□□ -0.57
SDF2-207ENST00000588472 NYXQ9GZU5 481 aa11.47□□□□□ -0.57
SDF2-207ENST00000588472 RNF181Q9P0P0 153 aa11.47□□□□□ -0.57
SDF2-207ENST00000588472 PDZRN3Q9UPQ7 1066 aa11.47□□□□□ -0.57
SDF2-207ENST00000588472 UBN2Q6ZU65 1347 aa11.46□□□□□ -0.57
SDF2-207ENST00000588472 TCERG1O14776 1098 aaKnown RBP11.46□□□□□ -0.57
SDF2-207ENST00000588472 SRGNP10124 158 aa11.46□□□□□ -0.57
SDF2-207ENST00000588472 GIGYF2Q6Y7W6 1299 aaKnown RBP11.46□□□□□ -0.57
SDF2-207ENST00000588472 LRP10Q7Z4F1 713 aa11.46□□□□□ -0.57
SDF2-207ENST00000588472 WWC1Q8IX03 1113 aa11.46□□□□□ -0.57
SDF2-207ENST00000588472 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
SDF2-207ENST00000588472 MASTLQ96GX5 879 aa11.46□□□□□ -0.57
SDF2-207ENST00000588472 DBF4Q9UBU7 674 aaPredicted RBP11.46□□□□□ -0.57
SDF2-207ENST00000588472 NUP98P52948 1817 aa11.46□□□□□ -0.58
SDF2-207ENST00000588472 RGL2O15211 777 aa11.45□□□□□ -0.58
SDF2-207ENST00000588472 PRELPP51888 382 aa11.45□□□□□ -0.58
SDF2-207ENST00000588472 STYK1Q6J9G0 422 aa11.45□□□□□ -0.58
SDF2-207ENST00000588472 PRPF40BQ6NWY9 871 aaKnown RBP11.45□□□□□ -0.58
SDF2-207ENST00000588472 PPP1R42Q7Z4L9 355 aa11.45□□□□□ -0.58
SDF2-207ENST00000588472 ZNF34Q8IZ26 560 aa11.45□□□□□ -0.58
SDF2-207ENST00000588472 WDR90Q96KV7 1748 aa11.45□□□□□ -0.58
SDF2-207ENST00000588472 ARFGEF1Q9Y6D6 1849 aa11.44□□□□□ -0.58
SDF2-207ENST00000588472 COL11A2P13942 1736 aaPredicted RBP11.44□□□□□ -0.58
SDF2-207ENST00000588472 HOXB7P09629 217 aa11.44□□□□□ -0.58
SDF2-207ENST00000588472 NPR1P16066 1061 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms