RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 EPHA10Q5JZY3 1008 aa16.88■□□□□ 0.29
CNTD1-204ENST00000588408 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
CNTD1-204ENST00000588408 MYD88Q99836 296 aa16.88■□□□□ 0.29
CNTD1-204ENST00000588408 SIL1Q9H173 461 aa16.88■□□□□ 0.29
CNTD1-204ENST00000588408 GOLGA6L3A6NEY3 463 aa16.87■□□□□ 0.29
CNTD1-204ENST00000588408 SASH1O94885 1247 aa16.87■□□□□ 0.29
CNTD1-204ENST00000588408 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
CNTD1-204ENST00000588408 LRP10Q7Z4F1 713 aa16.87■□□□□ 0.29
CNTD1-204ENST00000588408 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
CNTD1-204ENST00000588408 FOXD4L5Q5VV16 416 aaPredicted RBP16.87■□□□□ 0.29
CNTD1-204ENST00000588408 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
CNTD1-204ENST00000588408 FOXD4L4Q8WXT5 416 aaPredicted RBP16.87■□□□□ 0.29
CNTD1-204ENST00000588408 NEURL1BA8MQ27 555 aa16.86■□□□□ 0.29
CNTD1-204ENST00000588408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.86■□□□□ 0.29
CNTD1-204ENST00000588408 UTYO14607 1347 aa16.86■□□□□ 0.29
CNTD1-204ENST00000588408 SGSM2O43147 1006 aa16.86■□□□□ 0.29
CNTD1-204ENST00000588408 HSP90AB4PQ58FF6 505 aa16.86■□□□□ 0.29
CNTD1-204ENST00000588408 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
CNTD1-204ENST00000588408 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
CNTD1-204ENST00000588408 TLR7Q9NYK1 1049 aaKnown RBP16.86■□□□□ 0.29
CNTD1-204ENST00000588408 MCCP23508 829 aa16.85■□□□□ 0.29
CNTD1-204ENST00000588408 MCTP1Q6DN14 999 aa16.85■□□□□ 0.29
CNTD1-204ENST00000588408 AACSQ86V21 672 aa16.85■□□□□ 0.29
CNTD1-204ENST00000588408 CNTROBQ8N137 903 aa16.85■□□□□ 0.29
CNTD1-204ENST00000588408 USP42Q9H9J4 1324 aaKnown RBP16.85■□□□□ 0.29
CNTD1-204ENST00000588408 GCKRQ14397 625 aa16.85■□□□□ 0.29
CNTD1-204ENST00000588408 CLEC17AQ6ZS10 378 aa16.85■□□□□ 0.29
CNTD1-204ENST00000588408 GAS2L3Q86XJ1 694 aa16.85■□□□□ 0.29
CNTD1-204ENST00000588408 TTC5Q8N0Z6 440 aa16.85■□□□□ 0.29
CNTD1-204ENST00000588408 EAF2Q96CJ1 260 aaPredicted RBP16.85■□□□□ 0.29
CNTD1-204ENST00000588408 LSG1Q9H089 658 aaKnown RBP16.85■□□□□ 0.29
CNTD1-204ENST00000588408 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
CNTD1-204ENST00000588408 AFDNP55196 1824 aaKnown RBP16.84■□□□□ 0.29
CNTD1-204ENST00000588408 HSPA4P34932 840 aa16.84■□□□□ 0.29
CNTD1-204ENST00000588408 L1TD1Q5T7N2 865 aaKnown RBP16.84■□□□□ 0.29
CNTD1-204ENST00000588408 LARP1Q6PKG0 1096 aaKnown RBP16.84■□□□□ 0.29
CNTD1-204ENST00000588408 RASEFQ8IZ41 740 aa16.84■□□□□ 0.29
CNTD1-204ENST00000588408 MRC1P22897 1456 aa16.84■□□□□ 0.29
CNTD1-204ENST00000588408 GLI3P10071 1580 aa16.84■□□□□ 0.29
CNTD1-204ENST00000588408 SNRPA1P09661 255 aaKnown RBP16.84■□□□□ 0.29
CNTD1-204ENST00000588408 CABP4P57796 275 aa16.84■□□□□ 0.29
CNTD1-204ENST00000588408 LARP6Q9BRS8 491 aaKnown RBP16.84■□□□□ 0.29
CNTD1-204ENST00000588408 TTC41PQ6P2S7 1318 aa16.83■□□□□ 0.28
CNTD1-204ENST00000588408 ATP5J2-PTCD1G3V325 749 aa16.83■□□□□ 0.28
CNTD1-204ENST00000588408 PTCD1O75127 700 aaKnown RBP16.83■□□□□ 0.28
CNTD1-204ENST00000588408 GLRX3O76003 335 aaKnown RBP16.83■□□□□ 0.28
CNTD1-204ENST00000588408 IFIT2P09913 472 aaKnown RBP16.83■□□□□ 0.28
CNTD1-204ENST00000588408 ANAPC15P60006 121 aa16.83■□□□□ 0.28
CNTD1-204ENST00000588408 NUCB2P80303 420 aa16.83■□□□□ 0.28
CNTD1-204ENST00000588408 ANKRD13DQ6ZTN6 518 aa16.83■□□□□ 0.28
CNTD1-204ENST00000588408 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.28
CNTD1-204ENST00000588408 ECHDC1Q9NTX5 307 aa16.83■□□□□ 0.28
CNTD1-204ENST00000588408 CPDO75976 1380 aa16.83■□□□□ 0.28
CNTD1-204ENST00000588408 RAD50Q92878 1312 aa16.83■□□□□ 0.28
CNTD1-204ENST00000588408 FMNL2Q96PY5 1086 aa16.82■□□□□ 0.28
CNTD1-204ENST00000588408 CWC22Q9HCG8 908 aaKnown RBP16.82■□□□□ 0.28
CNTD1-204ENST00000588408 PRDM11Q9NQV5 511 aa16.82■□□□□ 0.28
CNTD1-204ENST00000588408 SNX14Q9Y5W7 946 aa16.82■□□□□ 0.28
CNTD1-204ENST00000588408 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
CNTD1-204ENST00000588408 CPA1P15085 419 aa16.81■□□□□ 0.28
CNTD1-204ENST00000588408 PTH1RQ03431 593 aa16.81■□□□□ 0.28
CNTD1-204ENST00000588408 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
CNTD1-204ENST00000588408 ABCC6O95255 1503 aa16.81■□□□□ 0.28
CNTD1-204ENST00000588408 G3BP1Q13283 466 aaKnown RBP eCLIP16.81■□□□□ 0.28
CNTD1-204ENST00000588408 TOM1L2Q6ZVM7 507 aa16.81■□□□□ 0.28
CNTD1-204ENST00000588408 STRCQ7RTU9 1775 aa16.81■□□□□ 0.28
CNTD1-204ENST00000588408 ZNF335Q9H4Z2 1342 aaPredicted RBP16.8■□□□□ 0.28
CNTD1-204ENST00000588408 DTNBO60941 627 aa16.8■□□□□ 0.28
CNTD1-204ENST00000588408 IL17RAQ96F46 866 aa16.8■□□□□ 0.28
CNTD1-204ENST00000588408 CUL4AQ13619 759 aa16.8■□□□□ 0.28
CNTD1-204ENST00000588408 ERC1Q8IUD2 1116 aa16.8■□□□□ 0.28
CNTD1-204ENST00000588408 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
CNTD1-204ENST00000588408 NBPF26B4DH59 902 aa16.79■□□□□ 0.28
CNTD1-204ENST00000588408 NBPF14Q5TI25 921 aa16.79■□□□□ 0.28
CNTD1-204ENST00000588408 NBPF10Q6P3W6 841 aaKnown RBP16.79■□□□□ 0.28
CNTD1-204ENST00000588408 UBE3BQ7Z3V4 1068 aa16.79■□□□□ 0.28
CNTD1-204ENST00000588408 NBPF15Q8N660 670 aa16.79■□□□□ 0.28
CNTD1-204ENST00000588408 DDX49Q9Y6V7 483 aaKnown RBP16.79■□□□□ 0.28
CNTD1-204ENST00000588408 FAM227BQ96M60 508 aa16.79■□□□□ 0.28
CNTD1-204ENST00000588408 DIAPH3Q9NSV4 1193 aa16.79■□□□□ 0.28
CNTD1-204ENST00000588408 WDR17Q8IZU2 1322 aa16.78■□□□□ 0.28
CNTD1-204ENST00000588408 SKOR2Q2VWA4 1001 aaPredicted RBP16.78■□□□□ 0.28
CNTD1-204ENST00000588408 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
CNTD1-204ENST00000588408 BOLA2Q9H3K6 86 aa16.78■□□□□ 0.28
CNTD1-204ENST00000588408 GRPEL1Q9HAV7 217 aa16.78■□□□□ 0.28
CNTD1-204ENST00000588408 GOLGA6L22H0YM25 854 aa16.78■□□□□ 0.28
CNTD1-204ENST00000588408 ZCRB1Q8TBF4 217 aaKnown RBP16.78■□□□□ 0.28
CNTD1-204ENST00000588408 EDC3Q96F86 508 aaKnown RBP16.78■□□□□ 0.28
CNTD1-204ENST00000588408 SLAIN2Q9P270 581 aa16.78■□□□□ 0.28
CNTD1-204ENST00000588408 PRPF40AO75400 957 aaKnown RBP16.77■□□□□ 0.28
CNTD1-204ENST00000588408 COL9A3Q14050 684 aaPredicted RBP16.77■□□□□ 0.28
CNTD1-204ENST00000588408 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.28
CNTD1-204ENST00000588408 STRN4Q9NRL3 753 aa16.77■□□□□ 0.28
CNTD1-204ENST00000588408 HDAC5Q9UQL6 1122 aa16.77■□□□□ 0.28
CNTD1-204ENST00000588408 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.27
CNTD1-204ENST00000588408 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.27
CNTD1-204ENST00000588408 RFX5P48382 616 aaPredicted RBP16.77■□□□□ 0.27
CNTD1-204ENST00000588408 MCM2P49736 904 aa16.77■□□□□ 0.27
CNTD1-204ENST00000588408 ADCK5Q3MIX3 580 aa16.77■□□□□ 0.27
CNTD1-204ENST00000588408 NDUFB9Q9Y6M9 179 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms