RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 CSPP1Q1MSJ5 1256 aa18.44■□□□□ 0.54
KDM4B-206ENST00000588361 BABAM1Q9NWV8 329 aa18.44■□□□□ 0.54
KDM4B-206ENST00000588361 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.44■□□□□ 0.54
KDM4B-206ENST00000588361 NWD1Q149M9 1564 aa18.44■□□□□ 0.54
KDM4B-206ENST00000588361 PTH1RQ03431 593 aa18.44■□□□□ 0.54
KDM4B-206ENST00000588361 PRPF40BQ6NWY9 871 aaKnown RBP18.44■□□□□ 0.54
KDM4B-206ENST00000588361 SLC39A6Q13433 755 aa18.44■□□□□ 0.54
KDM4B-206ENST00000588361 KLHDC4Q8TBB5 520 aa18.44■□□□□ 0.54
KDM4B-206ENST00000588361 INTS4Q96HW7 963 aaKnown RBP18.44■□□□□ 0.54
KDM4B-206ENST00000588361 LSG1Q9H089 658 aaKnown RBP18.44■□□□□ 0.54
KDM4B-206ENST00000588361 CCDC8Q9H0W5 538 aaPredicted RBP18.44■□□□□ 0.54
KDM4B-206ENST00000588361 DBF4Q9UBU7 674 aaPredicted RBP18.44■□□□□ 0.54
KDM4B-206ENST00000588361 GCP02774 474 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 ZSCAN20P17040 1043 aaPredicted RBP18.43■□□□□ 0.54
KDM4B-206ENST00000588361 AKAP4Q5JQC9 854 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 AACSQ86V21 672 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 CCDC39Q9UFE4 941 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 CNPY2Q9Y2B0 182 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 RAD50Q92878 1312 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 ADCY9O60503 1353 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 MBD3O95983 291 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 MYL6BP14649 208 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 KCNJ4P48050 445 aa18.43■□□□□ 0.54
KDM4B-206ENST00000588361 PIP4K2AP48426 406 aaPredicted RBP18.43■□□□□ 0.54
KDM4B-206ENST00000588361 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
KDM4B-206ENST00000588361 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.43■□□□□ 0.54
KDM4B-206ENST00000588361 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
KDM4B-206ENST00000588361 RNMTO43148 476 aaKnown RBP18.42■□□□□ 0.54
KDM4B-206ENST00000588361 LARGE1O95461 756 aa18.42■□□□□ 0.54
KDM4B-206ENST00000588361 ZC3H6P61129 1189 aaKnown RBP18.42■□□□□ 0.54
KDM4B-206ENST00000588361 ADCK5Q3MIX3 580 aa18.42■□□□□ 0.54
KDM4B-206ENST00000588361 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
KDM4B-206ENST00000588361 CCDC83Q8IWF9 413 aa18.42■□□□□ 0.54
KDM4B-206ENST00000588361 JAKMIP1Q96N16 626 aaKnown RBP18.42■□□□□ 0.54
KDM4B-206ENST00000588361 FIBPO43427 364 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 ZNF710Q8N1W2 664 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 ANKRD24Q8TF21 1146 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 SPDYE4A6NLX3 237 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 GLRX3O76003 335 aaKnown RBP18.41■□□□□ 0.54
KDM4B-206ENST00000588361 AXIN2Q9Y2T1 843 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 ARHGAP23Q9P227 1491 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 WDR33Q9C0J8 1336 aaKnown RBP18.41■□□□□ 0.54
KDM4B-206ENST00000588361 ANKLE2Q86XL3 938 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 TCEANC2Q96MN5 208 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 AOX1Q06278 1338 aa18.41■□□□□ 0.54
KDM4B-206ENST00000588361 GIGYF1O75420 1035 aaPredicted RBP18.4■□□□□ 0.54
KDM4B-206ENST00000588361 HSP90AB4PQ58FF6 505 aa18.4■□□□□ 0.54
KDM4B-206ENST00000588361 TTC12Q9H892 705 aaPredicted RBP18.4■□□□□ 0.54
KDM4B-206ENST00000588361 XRN1Q8IZH2 1706 aaKnown RBP18.4■□□□□ 0.54
KDM4B-206ENST00000588361 SLIT1O75093 1534 aa18.4■□□□□ 0.54
KDM4B-206ENST00000588361 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
KDM4B-206ENST00000588361 NECAB1Q8N987 351 aa18.39■□□□□ 0.54
KDM4B-206ENST00000588361 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.54
KDM4B-206ENST00000588361 ECHDC1Q9NTX5 307 aa18.39■□□□□ 0.54
KDM4B-206ENST00000588361 LIMCH1Q9UPQ0 1083 aa18.39■□□□□ 0.54
KDM4B-206ENST00000588361 CCDC9Q9Y3X0 531 aaKnown RBP18.39■□□□□ 0.54
KDM4B-206ENST00000588361 SYT1P21579 422 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 DMTNQ08495 405 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 KIAA2012Q0VF49 1180 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 ATP2B3Q16720 1220 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 FAM227BQ96M60 508 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 BOLA2Q9H3K6 86 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 TSPY26PQ9H489 355 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 FAM208AQ9UK61 1670 aaKnown RBP18.39■□□□□ 0.53
KDM4B-206ENST00000588361 PLCB2Q00722 1185 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 KSR2Q6VAB6 950 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 SUCLG2Q96I99 432 aa18.39■□□□□ 0.53
KDM4B-206ENST00000588361 COL9A3Q14050 684 aaPredicted RBP18.38■□□□□ 0.53
KDM4B-206ENST00000588361 MTERF4Q7Z6M4 381 aaKnown RBP18.38■□□□□ 0.53
KDM4B-206ENST00000588361 BICC1Q9H694 974 aaKnown RBP18.38■□□□□ 0.53
KDM4B-206ENST00000588361 TLR7Q9NYK1 1049 aaKnown RBP18.38■□□□□ 0.53
KDM4B-206ENST00000588361 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
KDM4B-206ENST00000588361 PPP4R3BQ5MIZ7 849 aa18.38■□□□□ 0.53
KDM4B-206ENST00000588361 RIC3Q7Z5B4 369 aa18.38■□□□□ 0.53
KDM4B-206ENST00000588361 VPS37CA5D8V6 355 aaPredicted RBP18.37■□□□□ 0.53
KDM4B-206ENST00000588361 PDRG1Q9NUG6 133 aa18.37■□□□□ 0.53
KDM4B-206ENST00000588361 STX6O43752 255 aa18.37■□□□□ 0.53
KDM4B-206ENST00000588361 G3BP1Q13283 466 aaKnown RBP eCLIP18.37■□□□□ 0.532e-7■□□□□ 9.3
KDM4B-206ENST00000588361 TTC14Q96N46 770 aa18.37■□□□□ 0.53
KDM4B-206ENST00000588361 SYAP1Q96A49 352 aaPredicted RBP18.36■□□□□ 0.53
KDM4B-206ENST00000588361 HOXB7P09629 217 aa18.36■□□□□ 0.53
KDM4B-206ENST00000588361 ZSCAN22P10073 491 aaPredicted RBP18.36■□□□□ 0.53
KDM4B-206ENST00000588361 MYRIPQ8NFW9 859 aa18.36■□□□□ 0.53
KDM4B-206ENST00000588361 RUFY2Q8WXA3 655 aa18.36■□□□□ 0.53
KDM4B-206ENST00000588361 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
KDM4B-206ENST00000588361 GPATCH3Q96I76 525 aa18.36■□□□□ 0.53
KDM4B-206ENST00000588361 GJB2P29033 226 aa18.36■□□□□ 0.53
KDM4B-206ENST00000588361 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
KDM4B-206ENST00000588361 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
KDM4B-206ENST00000588361 USP25Q9UHP3 1055 aa18.36■□□□□ 0.53
KDM4B-206ENST00000588361 NDUFB9Q9Y6M9 179 aa18.36■□□□□ 0.53
KDM4B-206ENST00000588361 NLRP2Q9NX02 1062 aa18.35■□□□□ 0.53
KDM4B-206ENST00000588361 RPAP1Q9BWH6 1393 aaPredicted RBP18.35■□□□□ 0.53
KDM4B-206ENST00000588361 GRM8O00222 908 aa18.35■□□□□ 0.53
KDM4B-206ENST00000588361 SASH1O94885 1247 aa18.35■□□□□ 0.53
KDM4B-206ENST00000588361 MCM5P33992 734 aa18.35■□□□□ 0.53
KDM4B-206ENST00000588361 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
KDM4B-206ENST00000588361 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.35■□□□□ 0.53
KDM4B-206ENST00000588361 PXDNLA1KZ92 1463 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms