RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 MAP4K4O95819 1239 aaPredicted RBP23.91■■□□□ 1.42
MBD1-216ENST00000587605 GRM8O00222 908 aa23.9■■□□□ 1.42
MBD1-216ENST00000587605 KRT28Q7Z3Y7 464 aa23.9■■□□□ 1.42
MBD1-216ENST00000587605 EVI5LQ96CN4 794 aa23.9■■□□□ 1.42
MBD1-216ENST00000587605 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.9■■□□□ 1.42
MBD1-216ENST00000587605 LIMCH1Q9UPQ0 1083 aa23.9■■□□□ 1.42
MBD1-216ENST00000587605 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.9■■□□□ 1.42
MBD1-216ENST00000587605 ALS2Q96Q42 1657 aa23.9■■□□□ 1.42
MBD1-216ENST00000587605 SCN11AQ9UI33 1791 aa23.89■■□□□ 1.42
MBD1-216ENST00000587605 KCNB2Q92953 911 aa23.89■■□□□ 1.42
MBD1-216ENST00000587605 TM6SF1Q9BZW5 370 aa23.89■■□□□ 1.42
MBD1-216ENST00000587605 C1orf167Q5SNV9 1468 aa23.89■■□□□ 1.41
MBD1-216ENST00000587605 PHF14O94880 888 aa23.88■■□□□ 1.41
MBD1-216ENST00000587605 PROSER3Q2NL68 480 aa23.88■■□□□ 1.41
MBD1-216ENST00000587605 ERBB3P21860 1342 aa23.88■■□□□ 1.41
MBD1-216ENST00000587605 CWC27Q6UX04 472 aaKnown RBP23.88■■□□□ 1.41
MBD1-216ENST00000587605 NOL8Q76FK4 1167 aaKnown RBP23.88■■□□□ 1.41
MBD1-216ENST00000587605 TMEM87AQ8NBN3 555 aa23.88■■□□□ 1.41
MBD1-216ENST00000587605 TMEM63CQ9P1W3 806 aa23.88■■□□□ 1.41
MBD1-216ENST00000587605 PRIM1P49642 420 aaKnown RBP23.87■■□□□ 1.41
MBD1-216ENST00000587605 LARP1Q6PKG0 1096 aaKnown RBP23.87■■□□□ 1.41
MBD1-216ENST00000587605 ZSCAN30Q86W11 494 aa23.87■■□□□ 1.41
MBD1-216ENST00000587605 KLHL34Q8N239 644 aa23.87■■□□□ 1.41
MBD1-216ENST00000587605 RBSNQ9H1K0 784 aa23.87■■□□□ 1.41
MBD1-216ENST00000587605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.87■■□□□ 1.411e-7■□□□□ 11
MBD1-216ENST00000587605 ERBB4Q15303 1308 aa23.87■■□□□ 1.41
MBD1-216ENST00000587605 TRHP20396 242 aaPredicted RBP23.86■■□□□ 1.41
MBD1-216ENST00000587605 G3BP1Q13283 466 aaKnown RBP eCLIP23.86■■□□□ 1.41
MBD1-216ENST00000587605 ZSCAN31Q96LW9 406 aaPredicted RBP23.86■■□□□ 1.41
MBD1-216ENST00000587605 RBM27Q9P2N5 1060 aaKnown RBP23.86■■□□□ 1.41
MBD1-216ENST00000587605 LMOD2Q6P5Q4 547 aa23.86■■□□□ 1.41
MBD1-216ENST00000587605 PDLIM2Q96JY6 352 aa23.86■■□□□ 1.41
MBD1-216ENST00000587605 RGPD5Q99666 1765 aa23.85■■□□□ 1.41
MBD1-216ENST00000587605 VPS53Q5VIR6 699 aa23.85■■□□□ 1.41
MBD1-216ENST00000587605 FOXD4L5Q5VV16 416 aaPredicted RBP23.85■■□□□ 1.41
MBD1-216ENST00000587605 FOXD4L4Q8WXT5 416 aaPredicted RBP23.85■■□□□ 1.41
MBD1-216ENST00000587605 RAPGEF4Q8WZA2 1011 aa23.85■■□□□ 1.41
MBD1-216ENST00000587605 ATP6V1DQ9Y5K8 247 aa23.85■■□□□ 1.41
MBD1-216ENST00000587605 AK2P54819 239 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 XPCQ01831 940 aaPredicted RBP23.84■■□□□ 1.41
MBD1-216ENST00000587605 NEXNQ0ZGT2 675 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 CWF19L2Q2TBE0 894 aaKnown RBP23.84■■□□□ 1.41
MBD1-216ENST00000587605 AACSQ86V21 672 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 SH2B1Q9NRF2 756 aaPredicted RBP23.84■■□□□ 1.41
MBD1-216ENST00000587605 AXIN2Q9Y2T1 843 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 MRC1P22897 1456 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 PDIA4P13667 645 aaKnown RBP23.84■■□□□ 1.41
MBD1-216ENST00000587605 RASEFQ8IZ41 740 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 SUCLG2Q96I99 432 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 SLC52A2Q9HAB3 445 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 SNRKQ9NRH2 765 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 SPG7Q9UQ90 795 aa23.84■■□□□ 1.41
MBD1-216ENST00000587605 RPAP1Q9BWH6 1393 aaPredicted RBP23.84■■□□□ 1.41
MBD1-216ENST00000587605 PDIA6Q15084 440 aa23.83■■□□□ 1.41
MBD1-216ENST00000587605 ZNF790Q6PG37 636 aa23.83■■□□□ 1.41
MBD1-216ENST00000587605 C19orf44Q9H6X5 657 aa23.83■■□□□ 1.41
MBD1-216ENST00000587605 RUFY3Q7L099 469 aa23.82■■□□□ 1.4
MBD1-216ENST00000587605 PROSER2Q86WR7 435 aaPredicted RBP23.82■■□□□ 1.4
MBD1-216ENST00000587605 NPHP3Q7Z494 1330 aa23.82■■□□□ 1.4
MBD1-216ENST00000587605 C5P01031 1676 aa23.82■■□□□ 1.4
MBD1-216ENST00000587605 SYCE3A1L190 88 aa23.82■■□□□ 1.4
MBD1-216ENST00000587605 ZSCAN22P10073 491 aaPredicted RBP23.82■■□□□ 1.4
MBD1-216ENST00000587605 TATP17735 454 aaPredicted RBP23.82■■□□□ 1.4
MBD1-216ENST00000587605 BICC1Q9H694 974 aaKnown RBP23.82■■□□□ 1.4
MBD1-216ENST00000587605 PA2G4Q9UQ80 394 aaKnown RBP23.82■■□□□ 1.4
MBD1-216ENST00000587605 SMC3Q9UQE7 1217 aa23.82■■□□□ 1.4
MBD1-216ENST00000587605 CYP46A1Q9Y6A2 500 aa23.82■■□□□ 1.4
MBD1-216ENST00000587605 CCDC171Q6TFL3 1326 aa23.81■■□□□ 1.4
MBD1-216ENST00000587605 ZKSCAN1P17029 563 aaPredicted RBP23.81■■□□□ 1.4
MBD1-216ENST00000587605 CASTP20810 708 aaKnown RBP23.81■■□□□ 1.4
MBD1-216ENST00000587605 RIC3Q7Z5B4 369 aa23.81■■□□□ 1.4
MBD1-216ENST00000587605 ZSWIM6Q9HCJ5 1215 aa23.81■■□□□ 1.4
MBD1-216ENST00000587605 KAZALD1Q96I82 304 aa23.8■■□□□ 1.4
MBD1-216ENST00000587605 KDM6AO15550 1401 aaPredicted RBP23.8■■□□□ 1.4
MBD1-216ENST00000587605 COL15A1P39059 1388 aa23.8■■□□□ 1.4
MBD1-216ENST00000587605 CSPP1Q1MSJ5 1256 aa23.8■■□□□ 1.4
MBD1-216ENST00000587605 NAP1L5Q96NT1 182 aaPredicted RBP23.8■■□□□ 1.4
MBD1-216ENST00000587605 PDRG1Q9NUG6 133 aa23.8■■□□□ 1.4
MBD1-216ENST00000587605 NSFL1CQ9UNZ2 370 aaKnown RBP23.8■■□□□ 1.4
MBD1-216ENST00000587605 PRAMEF22A3QJZ6 481 aa23.79■■□□□ 1.4
MBD1-216ENST00000587605 STX6O43752 255 aa23.79■■□□□ 1.4
MBD1-216ENST00000587605 SASH1O94885 1247 aa23.79■■□□□ 1.4
MBD1-216ENST00000587605 TSPY26PQ9H489 355 aa23.79■■□□□ 1.4
MBD1-216ENST00000587605 DCCP43146 1447 aa23.79■■□□□ 1.4
MBD1-216ENST00000587605 LETM1O95202 739 aaPredicted RBP23.78■■□□□ 1.4
MBD1-216ENST00000587605 PHKG2P15735 406 aa23.78■■□□□ 1.4
MBD1-216ENST00000587605 MSNP26038 577 aaKnown RBP23.78■■□□□ 1.4
MBD1-216ENST00000587605 NECTIN1Q15223 517 aa23.78■■□□□ 1.4
MBD1-216ENST00000587605 METTL22Q9BUU2 404 aaPredicted RBP23.78■■□□□ 1.4
MBD1-216ENST00000587605 NEURL1BA8MQ27 555 aa23.78■■□□□ 1.4
MBD1-216ENST00000587605 IGKV5-2P06315 115 aa23.78■■□□□ 1.4
MBD1-216ENST00000587605 PSMA5P28066 241 aa23.78■■□□□ 1.4
MBD1-216ENST00000587605 USP48Q86UV5 1035 aa23.78■■□□□ 1.4
MBD1-216ENST00000587605 CHAMP1Q96JM3 812 aa23.78■■□□□ 1.4
MBD1-216ENST00000587605 JAKMIP1Q96N16 626 aaKnown RBP23.78■■□□□ 1.4
MBD1-216ENST00000587605 PTH1RQ03431 593 aa23.77■■□□□ 1.4
MBD1-216ENST00000587605 PRPF40BQ6NWY9 871 aaKnown RBP23.77■■□□□ 1.4
MBD1-216ENST00000587605 IFNL2Q8IZJ0 200 aa23.77■■□□□ 1.4
MBD1-216ENST00000587605 COL18A1P39060 1754 aa23.77■■□□□ 1.4
MBD1-216ENST00000587605 MCM5P33992 734 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 275.5 ms