RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 LARGE1O95461 756 aa19.62■□□□□ 0.73
RANBP3-209ENST00000587411 TTC41PQ6P2S7 1318 aa19.62■□□□□ 0.73
RANBP3-209ENST00000587411 CRYBG1Q9Y4K1 1723 aa19.62■□□□□ 0.73
RANBP3-209ENST00000587411 SBNO1A3KN83 1393 aa19.61■□□□□ 0.73
RANBP3-209ENST00000587411 KCNB2Q92953 911 aa19.61■□□□□ 0.73
RANBP3-209ENST00000587411 NUP62CLQ9H1M0 184 aa19.61■□□□□ 0.73
RANBP3-209ENST00000587411 ZSWIM6Q9HCJ5 1215 aa19.61■□□□□ 0.73
RANBP3-209ENST00000587411 CYP46A1Q9Y6A2 500 aa19.61■□□□□ 0.73
RANBP3-209ENST00000587411 KRT85P78386 507 aa19.61■□□□□ 0.73
RANBP3-209ENST00000587411 CWC27Q6UX04 472 aaKnown RBP19.61■□□□□ 0.73
RANBP3-209ENST00000587411 LARP6Q9BRS8 491 aaKnown RBP19.61■□□□□ 0.73
RANBP3-209ENST00000587411 IGSF1Q8N6C5 1336 aa19.61■□□□□ 0.73
RANBP3-209ENST00000587411 GLRX3O76003 335 aaKnown RBP19.6■□□□□ 0.73
RANBP3-209ENST00000587411 CACNA1FO60840 1977 aa19.6■□□□□ 0.73
RANBP3-209ENST00000587411 TOPAZ1Q8N9V7 1692 aa19.6■□□□□ 0.73
RANBP3-209ENST00000587411 AGLP35573 1532 aa19.6■□□□□ 0.73
RANBP3-209ENST00000587411 VPS37CA5D8V6 355 aaPredicted RBP19.59■□□□□ 0.73
RANBP3-209ENST00000587411 TYRO3Q06418 890 aa19.59■□□□□ 0.73
RANBP3-209ENST00000587411 CYB5RLQ6IPT4 315 aa19.59■□□□□ 0.73
RANBP3-209ENST00000587411 JAKMIP1Q96N16 626 aaKnown RBP19.59■□□□□ 0.73
RANBP3-209ENST00000587411 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
RANBP3-209ENST00000587411 PTGS1P23219 599 aa19.59■□□□□ 0.73
RANBP3-209ENST00000587411 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.59■□□□□ 0.73
RANBP3-209ENST00000587411 MRVI1Q9Y6F6 885 aa19.59■□□□□ 0.73
RANBP3-209ENST00000587411 GNAT3A8MTJ3 354 aa19.59■□□□□ 0.73
RANBP3-209ENST00000587411 HDGFP51858 240 aaKnown RBP19.59■□□□□ 0.73
RANBP3-209ENST00000587411 FMN2Q9NZ56 1722 aa19.58■□□□□ 0.73
RANBP3-209ENST00000587411 RIMS1Q86UR5 1692 aaKnown RBP19.58■□□□□ 0.73
RANBP3-209ENST00000587411 SMTNL1A8MU46 457 aa19.58■□□□□ 0.73
RANBP3-209ENST00000587411 SRGAP3O43295 1099 aa19.58■□□□□ 0.73
RANBP3-209ENST00000587411 PDCP20941 246 aa19.58■□□□□ 0.73
RANBP3-209ENST00000587411 NECTIN2Q92692 538 aa19.58■□□□□ 0.73
RANBP3-209ENST00000587411 CPA1P15085 419 aa19.58■□□□□ 0.72
RANBP3-209ENST00000587411 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.72
RANBP3-209ENST00000587411 TTC21AQ8NDW8 1320 aa19.58■□□□□ 0.72
RANBP3-209ENST00000587411 TTC6Q86TZ1 520 aa19.57■□□□□ 0.72
RANBP3-209ENST00000587411 U2AF2P26368 475 aaKnown RBP eCLIP19.57■□□□□ 0.72
RANBP3-209ENST00000587411 EYA1Q99502 592 aa19.57■□□□□ 0.72
RANBP3-209ENST00000587411 OGFRQ9NZT2 677 aa19.57■□□□□ 0.72
RANBP3-209ENST00000587411 SPDYE4A6NLX3 237 aa19.56■□□□□ 0.72
RANBP3-209ENST00000587411 ZKSCAN1P17029 563 aaPredicted RBP19.56■□□□□ 0.72
RANBP3-209ENST00000587411 DDX19AQ9NUU7 478 aaKnown RBP19.56■□□□□ 0.72
RANBP3-209ENST00000587411 CEP170BQ9Y4F5 1589 aaPredicted RBP19.56■□□□□ 0.72
RANBP3-209ENST00000587411 LARP1BQ659C4 914 aaKnown RBP19.56■□□□□ 0.72
RANBP3-209ENST00000587411 PRPF40BQ6NWY9 871 aaKnown RBP19.56■□□□□ 0.72
RANBP3-209ENST00000587411 SCAND2PQ9GZW5 306 aaPredicted RBP19.56■□□□□ 0.72
RANBP3-209ENST00000587411 PAXBP1Q9Y5B6 917 aa19.56■□□□□ 0.72
RANBP3-209ENST00000587411 NCBP1Q09161 790 aaKnown RBP19.55■□□□□ 0.72
RANBP3-209ENST00000587411 ST3GAL1Q11201 340 aa19.55■□□□□ 0.72
RANBP3-209ENST00000587411 TAF7Q15545 349 aaPredicted RBP19.55■□□□□ 0.72
RANBP3-209ENST00000587411 ME3Q16798 604 aa19.55■□□□□ 0.72
RANBP3-209ENST00000587411 CCDC186Q7Z3E2 898 aa19.55■□□□□ 0.72
RANBP3-209ENST00000587411 TNMDQ9H2S6 317 aa19.55■□□□□ 0.72
RANBP3-209ENST00000587411 ADGRL3Q9HAR2 1447 aa19.55■□□□□ 0.72
RANBP3-209ENST00000587411 ADCK5Q3MIX3 580 aa19.55■□□□□ 0.72
RANBP3-209ENST00000587411 HDGFL1Q5TGJ6 251 aa19.55■□□□□ 0.72
RANBP3-209ENST00000587411 RBM43Q6ZSC3 357 aaKnown RBP19.55■□□□□ 0.72
RANBP3-209ENST00000587411 ROBO2Q9HCK4 1378 aa19.54■□□□□ 0.72
RANBP3-209ENST00000587411 PTH1RQ03431 593 aa19.54■□□□□ 0.72
RANBP3-209ENST00000587411 LUZP1Q86V48 1076 aa19.54■□□□□ 0.72
RANBP3-209ENST00000587411 PLA2G4DQ86XP0 818 aa19.54■□□□□ 0.72
RANBP3-209ENST00000587411 TDRD7Q8NHU6 1098 aaKnown RBP19.54■□□□□ 0.72
RANBP3-209ENST00000587411 CBX8Q9HC52 389 aa19.54■□□□□ 0.72
RANBP3-209ENST00000587411 PODXL2Q9NZ53 605 aa19.54■□□□□ 0.72
RANBP3-209ENST00000587411 LIG1P18858 919 aa19.54■□□□□ 0.72
RANBP3-209ENST00000587411 ZNF75DP51815 510 aa19.54■□□□□ 0.72
RANBP3-209ENST00000587411 GPATCH3Q96I76 525 aa19.54■□□□□ 0.72
RANBP3-209ENST00000587411 NPHP3Q7Z494 1330 aa19.53■□□□□ 0.72
RANBP3-209ENST00000587411 SOX12O15370 315 aa19.53■□□□□ 0.72
RANBP3-209ENST00000587411 NECTIN1Q15223 517 aa19.53■□□□□ 0.72
RANBP3-209ENST00000587411 DRC7Q8IY82 874 aa19.53■□□□□ 0.72
RANBP3-209ENST00000587411 CGNQ9P2M7 1197 aaKnown RBP19.53■□□□□ 0.72
RANBP3-209ENST00000587411 GOLGA6L4A6NEF3 574 aa19.53■□□□□ 0.72
RANBP3-209ENST00000587411 CAVIN2O95810 425 aa19.53■□□□□ 0.72
RANBP3-209ENST00000587411 PSMA5P28066 241 aa19.53■□□□□ 0.72
RANBP3-209ENST00000587411 ANO6Q4KMQ2 910 aa19.53■□□□□ 0.72
RANBP3-209ENST00000587411 AMPHP49418 695 aa19.52■□□□□ 0.72
RANBP3-209ENST00000587411 ZSCAN25Q6NSZ9 544 aa19.52■□□□□ 0.72
RANBP3-209ENST00000587411 CHMP4AQ9BY43 222 aa19.52■□□□□ 0.72
RANBP3-209ENST00000587411 CLSTN2Q9H4D0 955 aa19.52■□□□□ 0.72
RANBP3-209ENST00000587411 ANKRD1Q15327 319 aa19.52■□□□□ 0.72
RANBP3-209ENST00000587411 CLASRPQ8N2M8 674 aaKnown RBP19.52■□□□□ 0.72
RANBP3-209ENST00000587411 TRIM5Q9C035 493 aa19.52■□□□□ 0.72
RANBP3-209ENST00000587411 ECHDC1Q9NTX5 307 aa19.52■□□□□ 0.72
RANBP3-209ENST00000587411 DACT1Q9NYF0 836 aa19.52■□□□□ 0.72
RANBP3-209ENST00000587411 CHD2O14647 1828 aaKnown RBP19.52■□□□□ 0.71
RANBP3-209ENST00000587411 PTPRUQ92729 1446 aa19.52■□□□□ 0.71
RANBP3-209ENST00000587411 TNNT1P13805 278 aa19.51■□□□□ 0.71
RANBP3-209ENST00000587411 CAMK4Q16566 473 aa19.51■□□□□ 0.71
RANBP3-209ENST00000587411 PHAXQ9H814 394 aaKnown RBP19.51■□□□□ 0.71
RANBP3-209ENST00000587411 HIP1O00291 1037 aa19.51■□□□□ 0.71
RANBP3-209ENST00000587411 CDC25BP30305 580 aa19.51■□□□□ 0.71
RANBP3-209ENST00000587411 OS9Q13438 667 aaPredicted RBP19.51■□□□□ 0.71
RANBP3-209ENST00000587411 CDC37L1Q7L3B6 337 aa19.51■□□□□ 0.71
RANBP3-209ENST00000587411 NECAB1Q8N987 351 aa19.51■□□□□ 0.71
RANBP3-209ENST00000587411 EVI5LQ96CN4 794 aa19.51■□□□□ 0.71
RANBP3-209ENST00000587411 C16orf45Q96MC5 204 aaPredicted RBP19.51■□□□□ 0.71
RANBP3-209ENST00000587411 TPCN1Q9ULQ1 816 aa19.51■□□□□ 0.71
RANBP3-209ENST00000587411 CCDC112Q8NEF3 446 aa19.5■□□□□ 0.71
RANBP3-209ENST00000587411 IL17REQ8NFR9 667 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms