RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 NBPF15Q8N660 670 aa15.57■□□□□ 0.08
LIG3-207ENST00000586119 JMYQ8N9B5 988 aa15.57■□□□□ 0.08
LIG3-207ENST00000586119 SRGNP10124 158 aa15.56■□□□□ 0.08
LIG3-207ENST00000586119 ERFEQ4G0M1 354 aa15.56■□□□□ 0.08
LIG3-207ENST00000586119 CNBD1Q8NA66 436 aa15.56■□□□□ 0.08
LIG3-207ENST00000586119 CFAP53Q96M91 514 aa15.56■□□□□ 0.08
LIG3-207ENST00000586119 ZC3H4Q9UPT8 1303 aaKnown RBP15.56■□□□□ 0.08
LIG3-207ENST00000586119 BCORQ6W2J9 1755 aa15.56■□□□□ 0.08
LIG3-207ENST00000586119 FAM177BA6PVY3 158 aa15.55■□□□□ 0.08
LIG3-207ENST00000586119 NPHP1O15259 732 aa15.55■□□□□ 0.08
LIG3-207ENST00000586119 DDNO94850 711 aaPredicted RBP15.55■□□□□ 0.08
LIG3-207ENST00000586119 POTEIP0CG38 1075 aa15.55■□□□□ 0.08
LIG3-207ENST00000586119 POTEJP0CG39 1038 aa15.55■□□□□ 0.08
LIG3-207ENST00000586119 OLFM4Q6UX06 510 aa15.55■□□□□ 0.08
LIG3-207ENST00000586119 SNRPA1P09661 255 aaKnown RBP15.54■□□□□ 0.08
LIG3-207ENST00000586119 HLFQ16534 295 aa15.54■□□□□ 0.08
LIG3-207ENST00000586119 STYK1Q6J9G0 422 aa15.54■□□□□ 0.08
LIG3-207ENST00000586119 PRPF40BQ6NWY9 871 aaKnown RBP15.54■□□□□ 0.08
LIG3-207ENST00000586119 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
LIG3-207ENST00000586119 RTF1Q92541 710 aaKnown RBP15.54■□□□□ 0.08
LIG3-207ENST00000586119 NUDCQ9Y266 331 aa15.54■□□□□ 0.08
LIG3-207ENST00000586119 ST5P78524 1137 aa15.53■□□□□ 0.08
LIG3-207ENST00000586119 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
LIG3-207ENST00000586119 C7orf43Q8WVR3 580 aa15.53■□□□□ 0.08
LIG3-207ENST00000586119 CNKSR1Q969H4 720 aa15.53■□□□□ 0.08
LIG3-207ENST00000586119 MASTLQ96GX5 879 aa15.53■□□□□ 0.08
LIG3-207ENST00000586119 PDZRN3Q9UPQ7 1066 aa15.53■□□□□ 0.08
LIG3-207ENST00000586119 NBPF5PQ86XG9 351 aaPredicted RBP15.52■□□□□ 0.08
LIG3-207ENST00000586119 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
LIG3-207ENST00000586119 TAOK3Q9H2K8 898 aa15.52■□□□□ 0.08
LIG3-207ENST00000586119 DLG5Q8TDM6 1919 aa15.51■□□□□ 0.07
LIG3-207ENST00000586119 PCNTO95613 3336 aa15.51■□□□□ 0.07
LIG3-207ENST00000586119 NIP7Q9Y221 180 aaKnown RBP eCLIP15.51■□□□□ 0.07
LIG3-207ENST00000586119 LTBP3Q9NS15 1303 aa15.5■□□□□ 0.07
LIG3-207ENST00000586119 TAF7Q15545 349 aaPredicted RBP15.5■□□□□ 0.07
LIG3-207ENST00000586119 CLEC4GQ6UXB4 293 aa15.5■□□□□ 0.07
LIG3-207ENST00000586119 THUMPD2Q9BTF0 503 aaKnown RBP15.5■□□□□ 0.07
LIG3-207ENST00000586119 ARFGEF2Q9Y6D5 1785 aa15.49■□□□□ 0.07
LIG3-207ENST00000586119 KLRG2A4D1S0 409 aaPredicted RBP15.48■□□□□ 0.07
LIG3-207ENST00000586119 SLC51AQ86UW1 340 aa15.48■□□□□ 0.07
LIG3-207ENST00000586119 ZNF277Q9NRM2 450 aaPredicted RBP15.48■□□□□ 0.07
LIG3-207ENST00000586119 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
LIG3-207ENST00000586119 CAPN15O75808 1086 aa15.47■□□□□ 0.07
LIG3-207ENST00000586119 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
LIG3-207ENST00000586119 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
LIG3-207ENST00000586119 NPR1P16066 1061 aa15.47■□□□□ 0.07
LIG3-207ENST00000586119 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
LIG3-207ENST00000586119 TPTE2Q6XPS3 522 aa15.47■□□□□ 0.07
LIG3-207ENST00000586119 NUTM1Q86Y26 1132 aa15.47■□□□□ 0.07
LIG3-207ENST00000586119 ZNF652Q9Y2D9 606 aa15.47■□□□□ 0.07
LIG3-207ENST00000586119 NUP98P52948 1817 aa15.47■□□□□ 0.07
LIG3-207ENST00000586119 ZNF541Q9H0D2 1346 aa15.46■□□□□ 0.07
LIG3-207ENST00000586119 CCDC93Q567U6 631 aa15.46■□□□□ 0.07
LIG3-207ENST00000586119 TTLL7Q6ZT98 887 aa15.46■□□□□ 0.07
LIG3-207ENST00000586119 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.07
LIG3-207ENST00000586119 MKRN1Q9UHC7 482 aaKnown RBP15.46■□□□□ 0.07
LIG3-207ENST00000586119 RRP7AQ9Y3A4 280 aaKnown RBP15.46■□□□□ 0.07
LIG3-207ENST00000586119 MYL6BP14649 208 aa15.44■□□□□ 0.06
LIG3-207ENST00000586119 EIF4A1P60842 406 aaKnown RBP15.44■□□□□ 0.06
LIG3-207ENST00000586119 FKBP4Q02790 459 aaKnown RBP eCLIP15.44■□□□□ 0.06
LIG3-207ENST00000586119 SOGA3Q5TF21 947 aa15.44■□□□□ 0.06
LIG3-207ENST00000586119 SYNE4Q8N205 404 aa15.44■□□□□ 0.06
LIG3-207ENST00000586119 TAF1DQ9H5J8 278 aaPredicted RBP15.44■□□□□ 0.06
LIG3-207ENST00000586119 ABCC12Q96J65 1359 aa15.44■□□□□ 0.06
LIG3-207ENST00000586119 GPTP24298 496 aa15.43■□□□□ 0.06
LIG3-207ENST00000586119 GTF2E1P29083 439 aaPredicted RBP15.43■□□□□ 0.06
LIG3-207ENST00000586119 KDM3BQ7LBC6 1761 aa15.43■□□□□ 0.06
LIG3-207ENST00000586119 EAPPQ56P03 285 aaPredicted RBP15.42■□□□□ 0.06
LIG3-207ENST00000586119 SUSD4Q5VX71 490 aa15.42■□□□□ 0.06
LIG3-207ENST00000586119 TNS4Q8IZW8 715 aa15.42■□□□□ 0.06
LIG3-207ENST00000586119 ZBTB3Q9H5J0 574 aa15.42■□□□□ 0.06
LIG3-207ENST00000586119 MAP3K15Q6ZN16 1313 aa15.42■□□□□ 0.06
LIG3-207ENST00000586119 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
LIG3-207ENST00000586119 LAMB4A4D0S4 1761 aa15.41■□□□□ 0.06
LIG3-207ENST00000586119 SCN4AP35499 1836 aa15.41■□□□□ 0.06
LIG3-207ENST00000586119 TCERG1O14776 1098 aaKnown RBP15.41■□□□□ 0.06
LIG3-207ENST00000586119 ITGBL1O95965 494 aaPredicted RBP15.41■□□□□ 0.06
LIG3-207ENST00000586119 NFE2L2Q16236 605 aa15.41■□□□□ 0.06
LIG3-207ENST00000586119 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
LIG3-207ENST00000586119 L3MBTL3Q96JM7 780 aaPredicted RBP15.41■□□□□ 0.06
LIG3-207ENST00000586119 CREBZFQ9NS37 354 aa15.41■□□□□ 0.06
LIG3-207ENST00000586119 PASKQ96RG2 1323 aa15.41■□□□□ 0.06
LIG3-207ENST00000586119 FZD9O00144 591 aa15.4■□□□□ 0.06
LIG3-207ENST00000586119 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
LIG3-207ENST00000586119 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
LIG3-207ENST00000586119 RTKN2Q8IZC4 609 aa15.4■□□□□ 0.06
LIG3-207ENST00000586119 COL4A5P29400 1685 aa15.4■□□□□ 0.06
LIG3-207ENST00000586119 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
LIG3-207ENST00000586119 ERVV-1B6SEH8 477 aa15.39■□□□□ 0.05
LIG3-207ENST00000586119 RGL2O15211 777 aa15.39■□□□□ 0.05
LIG3-207ENST00000586119 ANXA1P04083 346 aa15.39■□□□□ 0.05
LIG3-207ENST00000586119 CRY2Q49AN0 593 aa15.39■□□□□ 0.05
LIG3-207ENST00000586119 LDHDQ86WU2 507 aa15.39■□□□□ 0.05
LIG3-207ENST00000586119 PNISRQ8TF01 805 aaKnown RBP15.39■□□□□ 0.05
LIG3-207ENST00000586119 CLEC11AQ9Y240 323 aa15.39■□□□□ 0.05
LIG3-207ENST00000586119 SNED1Q8TER0 1413 aa15.39■□□□□ 0.05
LIG3-207ENST00000586119 IQCA1LA6NCM1 817 aa15.38■□□□□ 0.05
LIG3-207ENST00000586119 EPHX2P34913 555 aa15.38■□□□□ 0.05
LIG3-207ENST00000586119 MAP1SQ66K74 1059 aaPredicted RBP15.38■□□□□ 0.05
LIG3-207ENST00000586119 ZNF34Q8IZ26 560 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms