RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 USP17L12C9JPN9 530 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 USP17L11C9JVI0 530 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 USP17L21D6R901 530 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 USP17L18D6R9N7 530 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 USP17L22D6RA61 530 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 USP17L17D6RBQ6 530 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 USP17L19D6RCP7 530 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 USP17L20D6RJB6 530 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 KHNYNO15037 678 aaKnown RBP8.27□□□□□ -1.09
ZNF560-202ENST00000585974 EFSO43281 561 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 GSK3AP49840 483 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 USP17L24Q0WX57 530 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 DPYDQ12882 1025 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 CFAP70Q5T0N1 1121 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 GALNT6Q8NCL4 622 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 RHPN1Q8TCX5 695 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 EDARADDQ8WWZ3 215 aa8.27□□□□□ -1.09
ZNF560-202ENST00000585974 C2orf49Q9BVC5 232 aaPredicted RBP8.27□□□□□ -1.09
ZNF560-202ENST00000585974 PIK3R2O00459 728 aa8.26□□□□□ -1.09
ZNF560-202ENST00000585974 GDF11O95390 407 aa8.26□□□□□ -1.09
ZNF560-202ENST00000585974 IGFBP4P22692 258 aa8.26□□□□□ -1.09
ZNF560-202ENST00000585974 ADH6P28332 368 aa8.26□□□□□ -1.09
ZNF560-202ENST00000585974 CRTC2Q53ET0 693 aaPredicted RBP8.26□□□□□ -1.09
ZNF560-202ENST00000585974 TBCELQ5QJ74 424 aa8.26□□□□□ -1.09
ZNF560-202ENST00000585974 HINFPQ9BQA5 517 aa8.26□□□□□ -1.09
ZNF560-202ENST00000585974 DCDC2BA2VCK2 349 aa8.25□□□□□ -1.09
ZNF560-202ENST00000585974 C21orf2O43822 256 aa8.25□□□□□ -1.09
ZNF560-202ENST00000585974 SCG3Q8WXD2 468 aaKnown RBP8.25□□□□□ -1.09
ZNF560-202ENST00000585974 PHACTR1Q9C0D0 580 aa8.25□□□□□ -1.09
ZNF560-202ENST00000585974 PRR12Q9ULL5 1215 aa8.25□□□□□ -1.09
ZNF560-202ENST00000585974 DNMT3AQ9Y6K1 912 aaPredicted RBP8.25□□□□□ -1.09
ZNF560-202ENST00000585974 LRRC69Q6ZNQ3 347 aa8.24□□□□□ -1.09
ZNF560-202ENST00000585974 ALYREFQ86V81 257 aaKnown RBP8.24□□□□□ -1.09
ZNF560-202ENST00000585974 FAM200AQ8TCP9 573 aa8.24□□□□□ -1.09
ZNF560-202ENST00000585974 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.24□□□□□ -1.09
ZNF560-202ENST00000585974 GGA1Q9UJY5 639 aa8.24□□□□□ -1.09
ZNF560-202ENST00000585974 HCN4Q9Y3Q4 1203 aa8.24□□□□□ -1.09
ZNF560-202ENST00000585974 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
ZNF560-202ENST00000585974 EPXP11678 715 aa8.23□□□□□ -1.09
ZNF560-202ENST00000585974 RFX1P22670 979 aa8.23□□□□□ -1.09
ZNF560-202ENST00000585974 IRS1P35568 1242 aa8.23□□□□□ -1.09
ZNF560-202ENST00000585974 KCNQ4P56696 695 aa8.23□□□□□ -1.09
ZNF560-202ENST00000585974 ZNF468Q5VIY5 522 aaPredicted RBP8.23□□□□□ -1.09
ZNF560-202ENST00000585974 ALDH16A1Q8IZ83 802 aa8.23□□□□□ -1.09
ZNF560-202ENST00000585974 ARXQ96QS3 562 aa8.23□□□□□ -1.09
ZNF560-202ENST00000585974 EFCC1Q9HA90 598 aa8.23□□□□□ -1.09
ZNF560-202ENST00000585974 MKL2Q9ULH7 1088 aa8.23□□□□□ -1.09
ZNF560-202ENST00000585974 CD33P20138 364 aa8.22□□□□□ -1.09
ZNF560-202ENST00000585974 NEUROD1Q13562 356 aa8.22□□□□□ -1.09
ZNF560-202ENST00000585974 ELOAQ14241 798 aaKnown RBP8.22□□□□□ -1.09
ZNF560-202ENST00000585974 SH3PXD2AQ5TCZ1 1133 aa8.22□□□□□ -1.09
ZNF560-202ENST00000585974 FOXO3O43524 673 aa8.21□□□□□ -1.1
ZNF560-202ENST00000585974 RTN1Q16799 776 aa8.21□□□□□ -1.1
ZNF560-202ENST00000585974 IER5Q5VY09 327 aa8.21□□□□□ -1.1
ZNF560-202ENST00000585974 BTBD6Q96KE9 485 aa8.21□□□□□ -1.1
ZNF560-202ENST00000585974 NEURL1BA8MQ27 555 aa8.2□□□□□ -1.1
ZNF560-202ENST00000585974 SHISA8B8ZZ34 492 aa8.2□□□□□ -1.1
ZNF560-202ENST00000585974 IGHA1P01876 353 aa8.2□□□□□ -1.1
ZNF560-202ENST00000585974 WEE1P30291 646 aa8.2□□□□□ -1.1
ZNF560-202ENST00000585974 SWI5Q1ZZU3 235 aa8.2□□□□□ -1.1
ZNF560-202ENST00000585974 C1orf229Q6ZS94 237 aaPredicted RBP8.2□□□□□ -1.1
ZNF560-202ENST00000585974 SUSD3Q96L08 255 aa8.2□□□□□ -1.1
ZNF560-202ENST00000585974 SERPINA10Q9UK55 444 aa8.2□□□□□ -1.1
ZNF560-202ENST00000585974 SIN3BO75182 1162 aa8.19□□□□□ -1.1
ZNF560-202ENST00000585974 AMPD1P23109 780 aa8.19□□□□□ -1.1
ZNF560-202ENST00000585974 CHMP7Q8WUX9 453 aaPredicted RBP8.19□□□□□ -1.1
ZNF560-202ENST00000585974 CEP63Q96MT8 703 aa8.19□□□□□ -1.1
ZNF560-202ENST00000585974 C11orf16Q9NQ32 467 aa8.19□□□□□ -1.1
ZNF560-202ENST00000585974 HCN2Q9UL51 889 aa8.19□□□□□ -1.1
ZNF560-202ENST00000585974 KCNH4Q9UQ05 1017 aa8.19□□□□□ -1.1
ZNF560-202ENST00000585974 CNTNAP5Q8WYK1 1306 aa8.19□□□□□ -1.1
ZNF560-202ENST00000585974 ALAS2P22557 587 aa8.18□□□□□ -1.1
ZNF560-202ENST00000585974 BRD7Q9NPI1 651 aa8.18□□□□□ -1.1
ZNF560-202ENST00000585974 STRN4Q9NRL3 753 aa8.18□□□□□ -1.1
ZNF560-202ENST00000585974 KLF15Q9UIH9 416 aa8.18□□□□□ -1.1
ZNF560-202ENST00000585974 ADARB2-AS1A8MUL3 147 aa8.17□□□□□ -1.1
ZNF560-202ENST00000585974 TYRO3Q06418 890 aa8.17□□□□□ -1.1
ZNF560-202ENST00000585974 VTI1AQ96AJ9 217 aa8.17□□□□□ -1.1
ZNF560-202ENST00000585974 RRAGCQ9HB90 399 aa8.17□□□□□ -1.1
ZNF560-202ENST00000585974 NOVA2Q9UNW9 492 aaKnown RBP8.17□□□□□ -1.1
ZNF560-202ENST00000585974 ACIN1Q9UKV3 1341 aaKnown RBP8.17□□□□□ -1.1
ZNF560-202ENST00000585974 ELOA3CA0A087WX78 387 aaPredicted RBP8.16□□□□□ -1.1
ZNF560-202ENST00000585974 ELOA3DA6NLF2 546 aaPredicted RBP8.16□□□□□ -1.1
ZNF560-202ENST00000585974 TGFBR3LH3BV60 316 aa8.16□□□□□ -1.1
ZNF560-202ENST00000585974 ATG7O95352 703 aa8.16□□□□□ -1.1
ZNF560-202ENST00000585974 SRPK2P78362 688 aaKnown RBP8.16□□□□□ -1.1
ZNF560-202ENST00000585974 SFSWAPQ12872 951 aaKnown RBP8.16□□□□□ -1.1
ZNF560-202ENST00000585974 ELOA3BQ3SY89 546 aa8.16□□□□□ -1.1
ZNF560-202ENST00000585974 BTLAQ7Z6A9 289 aa8.16□□□□□ -1.1
ZNF560-202ENST00000585974 SYT9Q86SS6 491 aa8.16□□□□□ -1.1
ZNF560-202ENST00000585974 ELOA3Q8NG57 546 aa8.16□□□□□ -1.1
ZNF560-202ENST00000585974 CCDC97Q96F63 343 aaPredicted RBP8.16□□□□□ -1.1
ZNF560-202ENST00000585974 MYO19Q96H55 970 aa8.16□□□□□ -1.1
ZNF560-202ENST00000585974 GNB5O14775 395 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 EPB42P16452 691 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 PCBP4P57723 403 aaKnown RBP8.15□□□□□ -1.1
ZNF560-202ENST00000585974 SPEM2Q0P670 501 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 LINC00114Q6XXX2 140 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 CHSY3Q70JA7 882 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 FCHSD1Q86WN1 690 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms