RNA–Protein interactions for RNA: ENST00000585294.5

CUEDC1-213, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-213ENST00000585294 ST5P78524 1137 aa16.79■□□□□ 0.28
CUEDC1-213ENST00000585294 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
CUEDC1-213ENST00000585294 NIP7Q9Y221 180 aaKnown RBP eCLIP16.79■□□□□ 0.28
CUEDC1-213ENST00000585294 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
CUEDC1-213ENST00000585294 KDM2BQ8NHM5 1336 aa16.78■□□□□ 0.28
CUEDC1-213ENST00000585294 RIPK4P57078 832 aa16.78■□□□□ 0.28
CUEDC1-213ENST00000585294 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
CUEDC1-213ENST00000585294 ZNF652Q9Y2D9 606 aa16.78■□□□□ 0.28
CUEDC1-213ENST00000585294 DLG5Q8TDM6 1919 aa16.77■□□□□ 0.28
CUEDC1-213ENST00000585294 STYK1Q6J9G0 422 aa16.77■□□□□ 0.28
CUEDC1-213ENST00000585294 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.28
CUEDC1-213ENST00000585294 SBF1O95248 1867 aa16.77■□□□□ 0.27
CUEDC1-213ENST00000585294 COL11A2P13942 1736 aaPredicted RBP16.76■□□□□ 0.27
CUEDC1-213ENST00000585294 MYL6BP14649 208 aa16.76■□□□□ 0.27
CUEDC1-213ENST00000585294 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
CUEDC1-213ENST00000585294 TPTE2Q6XPS3 522 aa16.76■□□□□ 0.27
CUEDC1-213ENST00000585294 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
CUEDC1-213ENST00000585294 CNKSR1Q969H4 720 aa16.76■□□□□ 0.27
CUEDC1-213ENST00000585294 MASTLQ96GX5 879 aa16.76■□□□□ 0.27
CUEDC1-213ENST00000585294 BCORQ6W2J9 1755 aa16.76■□□□□ 0.27
CUEDC1-213ENST00000585294 CEP350Q5VT06 3117 aa16.75■□□□□ 0.27
CUEDC1-213ENST00000585294 TMPOP42166 694 aaKnown RBP16.75■□□□□ 0.27
CUEDC1-213ENST00000585294 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
CUEDC1-213ENST00000585294 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
CUEDC1-213ENST00000585294 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
CUEDC1-213ENST00000585294 KDM3BQ7LBC6 1761 aa16.74■□□□□ 0.27
CUEDC1-213ENST00000585294 MYBBP1AQ9BQG0 1328 aaKnown RBP16.74■□□□□ 0.27
CUEDC1-213ENST00000585294 KLRG2A4D1S0 409 aaPredicted RBP16.74■□□□□ 0.27
CUEDC1-213ENST00000585294 GLTPD2A6NH11 291 aa16.74■□□□□ 0.27
CUEDC1-213ENST00000585294 RGL2O15211 777 aa16.74■□□□□ 0.27
CUEDC1-213ENST00000585294 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
CUEDC1-213ENST00000585294 C7orf43Q8WVR3 580 aa16.74■□□□□ 0.27
CUEDC1-213ENST00000585294 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
CUEDC1-213ENST00000585294 GPTP24298 496 aa16.73■□□□□ 0.27
CUEDC1-213ENST00000585294 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
CUEDC1-213ENST00000585294 ZBTB3Q9H5J0 574 aa16.73■□□□□ 0.27
CUEDC1-213ENST00000585294 MAP3K15Q6ZN16 1313 aa16.72■□□□□ 0.27
CUEDC1-213ENST00000585294 ZC3H4Q9UPT8 1303 aaKnown RBP16.72■□□□□ 0.27
CUEDC1-213ENST00000585294 NPR1P16066 1061 aa16.72■□□□□ 0.27
CUEDC1-213ENST00000585294 EIF2S2P20042 333 aaKnown RBP16.72■□□□□ 0.27
CUEDC1-213ENST00000585294 APLP1P51693 650 aa16.72■□□□□ 0.27
CUEDC1-213ENST00000585294 HTRA3P83110 453 aa16.72■□□□□ 0.27
CUEDC1-213ENST00000585294 ERFEQ4G0M1 354 aa16.72■□□□□ 0.27
CUEDC1-213ENST00000585294 NUTM1Q86Y26 1132 aa16.72■□□□□ 0.27
CUEDC1-213ENST00000585294 SLX4Q8IY92 1834 aa16.72■□□□□ 0.27
CUEDC1-213ENST00000585294 POTECB2RU33 542 aa16.71■□□□□ 0.27
CUEDC1-213ENST00000585294 ANXA1P04083 346 aa16.71■□□□□ 0.27
CUEDC1-213ENST00000585294 GTF2E1P29083 439 aaPredicted RBP16.71■□□□□ 0.27
CUEDC1-213ENST00000585294 PDIA6Q15084 440 aa16.71■□□□□ 0.27
CUEDC1-213ENST00000585294 PROSER3Q2NL68 480 aa16.71■□□□□ 0.27
CUEDC1-213ENST00000585294 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
CUEDC1-213ENST00000585294 DNAJC5GQ8N7S2 189 aa16.71■□□□□ 0.27
CUEDC1-213ENST00000585294 TAOK3Q9H2K8 898 aa16.71■□□□□ 0.27
CUEDC1-213ENST00000585294 VEGFAP15692 232 aaPredicted RBP16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 FSTL1Q12841 308 aa16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 KRT24Q2M2I5 525 aa16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 LRP10Q7Z4F1 713 aa16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 ADAMTS8Q9UP79 889 aa16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 UBN2Q6ZU65 1347 aa16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
CUEDC1-213ENST00000585294 ABCC12Q96J65 1359 aa16.69■□□□□ 0.26
CUEDC1-213ENST00000585294 ZNF34Q8IZ26 560 aa16.69■□□□□ 0.26
CUEDC1-213ENST00000585294 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
CUEDC1-213ENST00000585294 RUNDC1Q96C34 613 aa16.68■□□□□ 0.26
CUEDC1-213ENST00000585294 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
CUEDC1-213ENST00000585294 CHL1O00533 1208 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 DDNO94850 711 aaPredicted RBP16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 LMOD3Q0VAK6 560 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 WDR43Q15061 677 aaKnown RBP eCLIP16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 CCDC93Q567U6 631 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 SOGA3Q5TF21 947 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 DPY19L2Q6NUT2 758 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 NYXQ9GZU5 481 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 BABAM1Q9NWV8 329 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 FER1L6Q2WGJ9 1857 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 ERBB4Q15303 1308 aa16.67■□□□□ 0.26
CUEDC1-213ENST00000585294 CRY2Q49AN0 593 aa16.66■□□□□ 0.26
CUEDC1-213ENST00000585294 GIGYF2Q6Y7W6 1299 aaKnown RBP16.66■□□□□ 0.26
CUEDC1-213ENST00000585294 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
CUEDC1-213ENST00000585294 SLC51AQ86UW1 340 aa16.66■□□□□ 0.26
CUEDC1-213ENST00000585294 SMC1BQ8NDV3 1235 aa16.66■□□□□ 0.26
CUEDC1-213ENST00000585294 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
CUEDC1-213ENST00000585294 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
CUEDC1-213ENST00000585294 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
CUEDC1-213ENST00000585294 NTSR2O95665 410 aa16.64■□□□□ 0.25
CUEDC1-213ENST00000585294 ALDH1B1P30837 517 aa16.64■□□□□ 0.25
CUEDC1-213ENST00000585294 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.25
CUEDC1-213ENST00000585294 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
CUEDC1-213ENST00000585294 COPS6Q7L5N1 327 aa16.64■□□□□ 0.25
CUEDC1-213ENST00000585294 CACNA1SQ13698 1873 aa16.64■□□□□ 0.25
CUEDC1-213ENST00000585294 HOXA10P31260 410 aaPredicted RBP16.63■□□□□ 0.25
CUEDC1-213ENST00000585294 RTKN2Q8IZC4 609 aa16.63■□□□□ 0.25
CUEDC1-213ENST00000585294 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
CUEDC1-213ENST00000585294 XAGE3Q8WTP9 111 aa16.63■□□□□ 0.25
CUEDC1-213ENST00000585294 NUP98P52948 1817 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms