RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 ZNF330Q9Y3S2 320 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-223ENST00000584760 GLTPD2A6NH11 291 aa17.49■□□□□ 0.39
SREBF1-223ENST00000584760 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-223ENST00000584760 PRELPP51888 382 aa17.49■□□□□ 0.39
SREBF1-223ENST00000584760 CCDC184Q52MB2 194 aa17.49■□□□□ 0.39
SREBF1-223ENST00000584760 TRIM35Q9UPQ4 493 aa17.49■□□□□ 0.39
SREBF1-223ENST00000584760 NBPF26B4DH59 902 aa17.48■□□□□ 0.39
SREBF1-223ENST00000584760 SERPINB2P05120 415 aa17.48■□□□□ 0.39
SREBF1-223ENST00000584760 NBPF10Q6P3W6 841 aaKnown RBP17.48■□□□□ 0.39
SREBF1-223ENST00000584760 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
SREBF1-223ENST00000584760 TTLL6Q8N841 843 aa17.48■□□□□ 0.39
SREBF1-223ENST00000584760 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
SREBF1-223ENST00000584760 TBC1D2BQ9UPU7 963 aa17.48■□□□□ 0.39
SREBF1-223ENST00000584760 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
SREBF1-223ENST00000584760 CAMTA2O94983 1202 aa17.47■□□□□ 0.39
SREBF1-223ENST00000584760 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
SREBF1-223ENST00000584760 C2CD5Q86YS7 1000 aa17.47■□□□□ 0.39
SREBF1-223ENST00000584760 BABAM1Q9NWV8 329 aa17.47■□□□□ 0.39
SREBF1-223ENST00000584760 NUP98P52948 1817 aa17.47■□□□□ 0.39
SREBF1-223ENST00000584760 COL11A2P13942 1736 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-223ENST00000584760 TNRC6CQ9HCJ0 1690 aaKnown RBP17.46■□□□□ 0.39
SREBF1-223ENST00000584760 H0YIN7 160 aa17.45■□□□□ 0.38
SREBF1-223ENST00000584760 TBC1D9BQ66K14 1250 aa17.45■□□□□ 0.38
SREBF1-223ENST00000584760 BICDL1Q6ZP65 573 aa17.45■□□□□ 0.38
SREBF1-223ENST00000584760 DZIP3Q86Y13 1208 aaKnown RBP17.45■□□□□ 0.38
SREBF1-223ENST00000584760 SBF1O95248 1867 aa17.45■□□□□ 0.38
SREBF1-223ENST00000584760 CARMIL3Q8ND23 1372 aa17.44■□□□□ 0.38
SREBF1-223ENST00000584760 ANP32CO43423 234 aa17.44■□□□□ 0.38
SREBF1-223ENST00000584760 HSPA1AP0DMV8 641 aaKnown RBP17.44■□□□□ 0.38
SREBF1-223ENST00000584760 HSPA1BP0DMV9 641 aaKnown RBP17.44■□□□□ 0.38
SREBF1-223ENST00000584760 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
SREBF1-223ENST00000584760 NFKBIEO00221 500 aa17.43■□□□□ 0.38
SREBF1-223ENST00000584760 CHL1O00533 1208 aa17.43■□□□□ 0.38
SREBF1-223ENST00000584760 APAF1O14727 1248 aa17.43■□□□□ 0.38
SREBF1-223ENST00000584760 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-223ENST00000584760 RGL2O15211 777 aa17.42■□□□□ 0.38
SREBF1-223ENST00000584760 DPY19L2Q6NUT2 758 aa17.42■□□□□ 0.38
SREBF1-223ENST00000584760 ERBB4Q15303 1308 aa17.42■□□□□ 0.38
SREBF1-223ENST00000584760 ANKRD36CQ5JPF3 1778 aa17.41■□□□□ 0.38
SREBF1-223ENST00000584760 POTECB2RU33 542 aa17.41■□□□□ 0.38
SREBF1-223ENST00000584760 ZNF622Q969S3 477 aaKnown RBP eCLIP17.41■□□□□ 0.388e-7■□□□□ 8.8
SREBF1-223ENST00000584760 ARFGEF2Q9Y6D5 1785 aa17.4■□□□□ 0.38
SREBF1-223ENST00000584760 CACNA1SQ13698 1873 aa17.4■□□□□ 0.38
SREBF1-223ENST00000584760 C21orf2O43822 256 aa17.4■□□□□ 0.38
SREBF1-223ENST00000584760 CLEC4GQ6UXB4 293 aa17.4■□□□□ 0.38
SREBF1-223ENST00000584760 CCDC24Q8N4L8 307 aa17.4■□□□□ 0.38
SREBF1-223ENST00000584760 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
SREBF1-223ENST00000584760 ERFEQ4G0M1 354 aa17.39■□□□□ 0.37
SREBF1-223ENST00000584760 ZNF652Q9Y2D9 606 aa17.39■□□□□ 0.37
SREBF1-223ENST00000584760 KRT24Q2M2I5 525 aa17.38■□□□□ 0.37
SREBF1-223ENST00000584760 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
SREBF1-223ENST00000584760 LRP10Q7Z4F1 713 aa17.38■□□□□ 0.37
SREBF1-223ENST00000584760 CFAP44Q96MT7 982 aa17.38■□□□□ 0.37
SREBF1-223ENST00000584760 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
SREBF1-223ENST00000584760 PDE6BP35913 854 aa17.37■□□□□ 0.37
SREBF1-223ENST00000584760 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
SREBF1-223ENST00000584760 LAS1LQ9Y4W2 734 aaKnown RBP17.37■□□□□ 0.37
SREBF1-223ENST00000584760 ZNF853P0CG23 659 aa17.36■□□□□ 0.37
SREBF1-223ENST00000584760 MYL6BP14649 208 aa17.36■□□□□ 0.37
SREBF1-223ENST00000584760 PDIA6Q15084 440 aa17.36■□□□□ 0.37
SREBF1-223ENST00000584760 HLFQ16534 295 aa17.36■□□□□ 0.37
SREBF1-223ENST00000584760 TTLL7Q6ZT98 887 aa17.36■□□□□ 0.37
SREBF1-223ENST00000584760 CNBD1Q8NA66 436 aa17.36■□□□□ 0.37
SREBF1-223ENST00000584760 MKRN1Q9UHC7 482 aaKnown RBP17.36■□□□□ 0.37
SREBF1-223ENST00000584760 MAP3K15Q6ZN16 1313 aa17.36■□□□□ 0.37
SREBF1-223ENST00000584760 ERVV-1B6SEH8 477 aa17.35■□□□□ 0.37
SREBF1-223ENST00000584760 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
SREBF1-223ENST00000584760 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
SREBF1-223ENST00000584760 CHADLQ6NUI6 762 aa17.35■□□□□ 0.37
SREBF1-223ENST00000584760 NGEFQ8N5V2 710 aa17.35■□□□□ 0.37
SREBF1-223ENST00000584760 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
SREBF1-223ENST00000584760 IFT57Q9NWB7 429 aa17.35■□□□□ 0.37
SREBF1-223ENST00000584760 DDNO94850 711 aaPredicted RBP17.34■□□□□ 0.37
SREBF1-223ENST00000584760 HOXB7P09629 217 aa17.34■□□□□ 0.37
SREBF1-223ENST00000584760 CALD1Q05682 793 aaKnown RBP17.34■□□□□ 0.37
SREBF1-223ENST00000584760 KIF6Q6ZMV9 814 aa17.34■□□□□ 0.37
SREBF1-223ENST00000584760 TIAM2Q8IVF5 1701 aa17.34■□□□□ 0.37
SREBF1-223ENST00000584760 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
SREBF1-223ENST00000584760 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
SREBF1-223ENST00000584760 NPHP1O15259 732 aa17.33■□□□□ 0.36
SREBF1-223ENST00000584760 ANXA1P04083 346 aa17.33■□□□□ 0.36
SREBF1-223ENST00000584760 POTEIP0CG38 1075 aa17.33■□□□□ 0.36
SREBF1-223ENST00000584760 POTEJP0CG39 1038 aa17.33■□□□□ 0.36
SREBF1-223ENST00000584760 CREBZFQ9NS37 354 aa17.33■□□□□ 0.36
SREBF1-223ENST00000584760 GNAI1P63096 354 aa17.32■□□□□ 0.36
SREBF1-223ENST00000584760 ST5P78524 1137 aa17.32■□□□□ 0.36
SREBF1-223ENST00000584760 CCDC27Q2M243 656 aa17.32■□□□□ 0.36
SREBF1-223ENST00000584760 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-223ENST00000584760 TAOK3Q9H2K8 898 aa17.32■□□□□ 0.36
SREBF1-223ENST00000584760 ZBTB3Q9H5J0 574 aa17.32■□□□□ 0.36
SREBF1-223ENST00000584760 FER1L6Q2WGJ9 1857 aa17.32■□□□□ 0.36
SREBF1-223ENST00000584760 SLX4Q8IY92 1834 aa17.32■□□□□ 0.36
SREBF1-223ENST00000584760 CCDC88AQ3V6T2 1871 aa17.31■□□□□ 0.36
SREBF1-223ENST00000584760 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-223ENST00000584760 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
SREBF1-223ENST00000584760 CNKSR1Q969H4 720 aa17.31■□□□□ 0.36
SREBF1-223ENST00000584760 PCNTO95613 3336 aa17.3■□□□□ 0.36
SREBF1-223ENST00000584760 UBN2Q6ZU65 1347 aa17.3■□□□□ 0.36
SREBF1-223ENST00000584760 LTBP3Q9NS15 1303 aa17.3■□□□□ 0.36
SREBF1-223ENST00000584760 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms