RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, human

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA3-219	ENST00000584550	WDR33	Q9C0J8	1336 aa	Known RBP	13.88	□□□□□ -0.19
GGA3-219	ENST00000584550	ZNF541	Q9H0D2	1346 aa		13.88	□□□□□ -0.19
GGA3-219	ENST00000584550	SRGN	P10124	158 aa		13.87	□□□□□ -0.19
GGA3-219	ENST00000584550	GRM1	Q13255	1194 aa		13.87	□□□□□ -0.19
GGA3-219	ENST00000584550	STYK1	Q6J9G0	422 aa		13.87	□□□□□ -0.19
GGA3-219	ENST00000584550	CNTROB	Q8N137	903 aa		13.87	□□□□□ -0.19
GGA3-219	ENST00000584550	CNBD1	Q8NA66	436 aa		13.87	□□□□□ -0.19
GGA3-219	ENST00000584550	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.87	□□□□□ -0.19
GGA3-219	ENST00000584550	SETDB2	Q96T68	719 aa		13.87	□□□□□ -0.19
GGA3-219	ENST00000584550	HACL1	Q9UJ83	578 aa		13.87	□□□□□ -0.19
GGA3-219	ENST00000584550	RASSF10	A6NK89	507 aa		13.86	□□□□□ -0.19
GGA3-219	ENST00000584550	EPHX2	P34913	555 aa		13.86	□□□□□ -0.19
GGA3-219	ENST00000584550	MAP2K1	Q02750	393 aa	Predicted RBP	13.86	□□□□□ -0.19
GGA3-219	ENST00000584550	OLFM4	Q6UX06	510 aa		13.86	□□□□□ -0.19
GGA3-219	ENST00000584550	TTC5	Q8N0Z6	440 aa		13.86	□□□□□ -0.19
GGA3-219	ENST00000584550	MASTL	Q96GX5	879 aa		13.86	□□□□□ -0.19
GGA3-219	ENST00000584550	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.86	□□□□□ -0.19
GGA3-219	ENST00000584550	ST5	P78524	1137 aa		13.85	□□□□□ -0.19
GGA3-219	ENST00000584550	MTHFSD	Q2M296	383 aa	Known RBP	13.85	□□□□□ -0.19
GGA3-219	ENST00000584550	SOGA3	Q5TF21	947 aa		13.85	□□□□□ -0.19
GGA3-219	ENST00000584550	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.85	□□□□□ -0.19
GGA3-219	ENST00000584550	CFAP44	Q96MT7	982 aa		13.85	□□□□□ -0.19
GGA3-219	ENST00000584550	MRC1	P22897	1456 aa		13.85	□□□□□ -0.19
GGA3-219	ENST00000584550	RNF123	Q5XPI4	1314 aa		13.85	□□□□□ -0.19
GGA3-219	ENST00000584550	TSKS	Q9UJT2	592 aa		13.84	□□□□□ -0.19
GGA3-219	ENST00000584550	UBR2	Q8IWV8	1755 aa		13.83	□□□□□ -0.19
GGA3-219	ENST00000584550	SCN7A	Q01118	1682 aa		13.83	□□□□□ -0.2
GGA3-219	ENST00000584550	A1BG	P04217	495 aa		13.83	□□□□□ -0.2
GGA3-219	ENST00000584550	FMR1	Q06787	632 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
GGA3-219	ENST00000584550	CCDC93	Q567U6	631 aa		13.83	□□□□□ -0.2
GGA3-219	ENST00000584550	NPM2	Q86SE8	214 aa	Known RBP	13.83	□□□□□ -0.2
GGA3-219	ENST00000584550	C7orf43	Q8WVR3	580 aa		13.83	□□□□□ -0.2
GGA3-219	ENST00000584550	ZNF496	Q96IT1	587 aa	Predicted RBP	13.83	□□□□□ -0.2
GGA3-219	ENST00000584550	ARFGEF2	Q9Y6D5	1785 aa		13.82	□□□□□ -0.2
GGA3-219	ENST00000584550	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
GGA3-219	ENST00000584550	PNMA8A	Q86V59	439 aa	Predicted RBP	13.82	□□□□□ -0.2
GGA3-219	ENST00000584550	BEGAIN	Q9BUH8	593 aa		13.82	□□□□□ -0.2
GGA3-219	ENST00000584550	ADAMTSL1	Q8N6G6	1762 aa		13.81	□□□□□ -0.2
GGA3-219	ENST00000584550	CAMTA2	O94983	1202 aa		13.81	□□□□□ -0.2
GGA3-219	ENST00000584550	IL6ST	P40189	918 aa	Predicted RBP	13.81	□□□□□ -0.2
GGA3-219	ENST00000584550	PIP4K2A	P48426	406 aa	Predicted RBP	13.81	□□□□□ -0.2
GGA3-219	ENST00000584550	CYP4F22	Q6NT55	531 aa		13.81	□□□□□ -0.2
GGA3-219	ENST00000584550	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.81	□□□□□ -0.2
GGA3-219	ENST00000584550	CAPNS2	Q96L46	248 aa		13.81	□□□□□ -0.2
GGA3-219	ENST00000584550	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
GGA3-219	ENST00000584550	PCDH10	Q9P2E7	1040 aa		13.81	□□□□□ -0.2
GGA3-219	ENST00000584550	FAM177B	A6PVY3	158 aa		13.8	□□□□□ -0.2
GGA3-219	ENST00000584550	RGS19	P49795	217 aa		13.8	□□□□□ -0.2
GGA3-219	ENST00000584550	ZNF790	Q6PG37	636 aa		13.8	□□□□□ -0.2
GGA3-219	ENST00000584550	DZIP3	Q86Y13	1208 aa	Known RBP	13.8	□□□□□ -0.2
GGA3-219	ENST00000584550	GPR101	Q96P66	508 aa	Predicted RBP	13.8	□□□□□ -0.2
GGA3-219	ENST00000584550	GJA3	Q9Y6H8	435 aa		13.8	□□□□□ -0.2
GGA3-219	ENST00000584550	HEG1	Q9ULI3	1381 aa		13.8	□□□□□ -0.2
GGA3-219	ENST00000584550	NPR1	P16066	1061 aa		13.79	□□□□□ -0.2
GGA3-219	ENST00000584550	IARS	P41252	1262 aa	Known RBP	13.79	□□□□□ -0.2
GGA3-219	ENST00000584550	SYNE4	Q8N205	404 aa		13.79	□□□□□ -0.2
GGA3-219	ENST00000584550	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.79	□□□□□ -0.2
GGA3-219	ENST00000584550	TNRC18	O15417	2968 aa	Predicted RBP	13.78	□□□□□ -0.2
GGA3-219	ENST00000584550	FZD9	O00144	591 aa		13.78	□□□□□ -0.2
GGA3-219	ENST00000584550	AOC2	O75106	756 aa		13.78	□□□□□ -0.2
GGA3-219	ENST00000584550	TEF	Q10587	303 aa		13.78	□□□□□ -0.2
GGA3-219	ENST00000584550	RTKN2	Q8IZC4	609 aa		13.78	□□□□□ -0.2
GGA3-219	ENST00000584550	GPC2	Q8N158	579 aa		13.78	□□□□□ -0.2
GGA3-219	ENST00000584550	TRAF5	O00463	557 aa		13.77	□□□□□ -0.21
GGA3-219	ENST00000584550	KCNQ3	O43525	872 aa		13.77	□□□□□ -0.21
GGA3-219	ENST00000584550	ECE1	P42892	770 aa		13.77	□□□□□ -0.21
GGA3-219	ENST00000584550	IL17RE	Q8NFR9	667 aa		13.77	□□□□□ -0.21
GGA3-219	ENST00000584550	FMNL2	Q96PY5	1086 aa		13.77	□□□□□ -0.21
GGA3-219	ENST00000584550	KNSTRN	Q9Y448	316 aa		13.77	□□□□□ -0.21
GGA3-219	ENST00000584550	CST9	Q5W186	159 aa		13.76	□□□□□ -0.21
GGA3-219	ENST00000584550	JDP2	Q8WYK2	163 aa		13.76	□□□□□ -0.21
GGA3-219	ENST00000584550	BCOR	Q6W2J9	1755 aa		13.76	□□□□□ -0.21
GGA3-219	ENST00000584550	PRAMEF22	A3QJZ6	481 aa		13.75	□□□□□ -0.21
GGA3-219	ENST00000584550	LMOD1	P29536	600 aa	Predicted RBP	13.75	□□□□□ -0.21
GGA3-219	ENST00000584550	EPS15	P42566	896 aa		13.75	□□□□□ -0.21
GGA3-219	ENST00000584550	MCOLN1	Q9GZU1	580 aa		13.75	□□□□□ -0.21
GGA3-219	ENST00000584550	USP16	Q9Y5T5	823 aa		13.75	□□□□□ -0.21
GGA3-219	ENST00000584550	LTBP1	Q14766	1721 aa		13.75	□□□□□ -0.21
GGA3-219	ENST00000584550	GNAT3	A8MTJ3	354 aa		13.74	□□□□□ -0.21
GGA3-219	ENST00000584550	DIAPH1	O60610	1272 aa	Known RBP	13.74	□□□□□ -0.21
GGA3-219	ENST00000584550	EIF6	P56537	245 aa	Known RBP	13.74	□□□□□ -0.21
GGA3-219	ENST00000584550	TPTE2	Q6XPS3	522 aa		13.74	□□□□□ -0.21
GGA3-219	ENST00000584550	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
GGA3-219	ENST00000584550	CASP8AP2	Q9UKL3	1982 aa		13.74	□□□□□ -0.21
GGA3-219	ENST00000584550	THSD7B	Q9C0I4	1608 aa		13.73	□□□□□ -0.21
GGA3-219	ENST00000584550	KLRG2	A4D1S0	409 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA3-219	ENST00000584550	BTBD11	A6QL63	1104 aa		13.73	□□□□□ -0.21
GGA3-219	ENST00000584550	GTF2E1	P29083	439 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA3-219	ENST00000584550	ALDH1B1	P30837	517 aa		13.73	□□□□□ -0.21
GGA3-219	ENST00000584550	SCNN1D	P51172	638 aa		13.73	□□□□□ -0.21
GGA3-219	ENST00000584550	ZNF652	Q9Y2D9	606 aa		13.73	□□□□□ -0.21
GGA3-219	ENST00000584550	TLL2	Q9Y6L7	1015 aa		13.73	□□□□□ -0.21
GGA3-219	ENST00000584550	COL4A5	P29400	1685 aa		13.72	□□□□□ -0.21
GGA3-219	ENST00000584550	TRPM7	Q96QT4	1865 aa		13.72	□□□□□ -0.21
GGA3-219	ENST00000584550	TCERG1	O14776	1098 aa	Known RBP	13.72	□□□□□ -0.21
GGA3-219	ENST00000584550	DGKZ	Q13574	1117 aa		13.72	□□□□□ -0.21
GGA3-219	ENST00000584550	CLEC4G	Q6UXB4	293 aa		13.72	□□□□□ -0.21
GGA3-219	ENST00000584550	SIPA1L3	O60292	1781 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA3-219	ENST00000584550	U2SURP	O15042	1029 aa	Known RBP	13.71	□□□□□ -0.21
GGA3-219	ENST00000584550	MAP2K2	P36507	400 aa		13.71	□□□□□ -0.21

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