RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 WDR33Q9C0J8 1336 aaKnown RBP13.88□□□□□ -0.19
GGA3-219ENST00000584550 ZNF541Q9H0D2 1346 aa13.88□□□□□ -0.19
GGA3-219ENST00000584550 SRGNP10124 158 aa13.87□□□□□ -0.19
GGA3-219ENST00000584550 GRM1Q13255 1194 aa13.87□□□□□ -0.19
GGA3-219ENST00000584550 STYK1Q6J9G0 422 aa13.87□□□□□ -0.19
GGA3-219ENST00000584550 CNTROBQ8N137 903 aa13.87□□□□□ -0.19
GGA3-219ENST00000584550 CNBD1Q8NA66 436 aa13.87□□□□□ -0.19
GGA3-219ENST00000584550 L3MBTL3Q96JM7 780 aaPredicted RBP13.87□□□□□ -0.19
GGA3-219ENST00000584550 SETDB2Q96T68 719 aa13.87□□□□□ -0.19
GGA3-219ENST00000584550 HACL1Q9UJ83 578 aa13.87□□□□□ -0.19
GGA3-219ENST00000584550 RASSF10A6NK89 507 aa13.86□□□□□ -0.19
GGA3-219ENST00000584550 EPHX2P34913 555 aa13.86□□□□□ -0.19
GGA3-219ENST00000584550 MAP2K1Q02750 393 aaPredicted RBP13.86□□□□□ -0.19
GGA3-219ENST00000584550 OLFM4Q6UX06 510 aa13.86□□□□□ -0.19
GGA3-219ENST00000584550 TTC5Q8N0Z6 440 aa13.86□□□□□ -0.19
GGA3-219ENST00000584550 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
GGA3-219ENST00000584550 ZNF277Q9NRM2 450 aaPredicted RBP13.86□□□□□ -0.19
GGA3-219ENST00000584550 ST5P78524 1137 aa13.85□□□□□ -0.19
GGA3-219ENST00000584550 MTHFSDQ2M296 383 aaKnown RBP13.85□□□□□ -0.19
GGA3-219ENST00000584550 SOGA3Q5TF21 947 aa13.85□□□□□ -0.19
GGA3-219ENST00000584550 PAXIP1Q6ZW49 1069 aaPredicted RBP13.85□□□□□ -0.19
GGA3-219ENST00000584550 CFAP44Q96MT7 982 aa13.85□□□□□ -0.19
GGA3-219ENST00000584550 MRC1P22897 1456 aa13.85□□□□□ -0.19
GGA3-219ENST00000584550 RNF123Q5XPI4 1314 aa13.85□□□□□ -0.19
GGA3-219ENST00000584550 TSKSQ9UJT2 592 aa13.84□□□□□ -0.19
GGA3-219ENST00000584550 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.19
GGA3-219ENST00000584550 SCN7AQ01118 1682 aa13.83□□□□□ -0.2
GGA3-219ENST00000584550 A1BGP04217 495 aa13.83□□□□□ -0.2
GGA3-219ENST00000584550 FMR1Q06787 632 aaKnown RBP eCLIP13.83□□□□□ -0.2
GGA3-219ENST00000584550 CCDC93Q567U6 631 aa13.83□□□□□ -0.2
GGA3-219ENST00000584550 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
GGA3-219ENST00000584550 C7orf43Q8WVR3 580 aa13.83□□□□□ -0.2
GGA3-219ENST00000584550 ZNF496Q96IT1 587 aaPredicted RBP13.83□□□□□ -0.2
GGA3-219ENST00000584550 ARFGEF2Q9Y6D5 1785 aa13.82□□□□□ -0.2
GGA3-219ENST00000584550 FKBP4Q02790 459 aaKnown RBP eCLIP13.82□□□□□ -0.2
GGA3-219ENST00000584550 PNMA8AQ86V59 439 aaPredicted RBP13.82□□□□□ -0.2
GGA3-219ENST00000584550 BEGAINQ9BUH8 593 aa13.82□□□□□ -0.2
GGA3-219ENST00000584550 ADAMTSL1Q8N6G6 1762 aa13.81□□□□□ -0.2
GGA3-219ENST00000584550 CAMTA2O94983 1202 aa13.81□□□□□ -0.2
GGA3-219ENST00000584550 IL6STP40189 918 aaPredicted RBP13.81□□□□□ -0.2
GGA3-219ENST00000584550 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
GGA3-219ENST00000584550 CYP4F22Q6NT55 531 aa13.81□□□□□ -0.2
GGA3-219ENST00000584550 NBPF5PQ86XG9 351 aaPredicted RBP13.81□□□□□ -0.2
GGA3-219ENST00000584550 CAPNS2Q96L46 248 aa13.81□□□□□ -0.2
GGA3-219ENST00000584550 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
GGA3-219ENST00000584550 PCDH10Q9P2E7 1040 aa13.81□□□□□ -0.2
GGA3-219ENST00000584550 FAM177BA6PVY3 158 aa13.8□□□□□ -0.2
GGA3-219ENST00000584550 RGS19P49795 217 aa13.8□□□□□ -0.2
GGA3-219ENST00000584550 ZNF790Q6PG37 636 aa13.8□□□□□ -0.2
GGA3-219ENST00000584550 DZIP3Q86Y13 1208 aaKnown RBP13.8□□□□□ -0.2
GGA3-219ENST00000584550 GPR101Q96P66 508 aaPredicted RBP13.8□□□□□ -0.2
GGA3-219ENST00000584550 GJA3Q9Y6H8 435 aa13.8□□□□□ -0.2
GGA3-219ENST00000584550 HEG1Q9ULI3 1381 aa13.8□□□□□ -0.2
GGA3-219ENST00000584550 NPR1P16066 1061 aa13.79□□□□□ -0.2
GGA3-219ENST00000584550 IARSP41252 1262 aaKnown RBP13.79□□□□□ -0.2
GGA3-219ENST00000584550 SYNE4Q8N205 404 aa13.79□□□□□ -0.2
GGA3-219ENST00000584550 TEX13AQ9BXU3 409 aaPredicted RBP13.79□□□□□ -0.2
GGA3-219ENST00000584550 TNRC18O15417 2968 aaPredicted RBP13.78□□□□□ -0.2
GGA3-219ENST00000584550 FZD9O00144 591 aa13.78□□□□□ -0.2
GGA3-219ENST00000584550 AOC2O75106 756 aa13.78□□□□□ -0.2
GGA3-219ENST00000584550 TEFQ10587 303 aa13.78□□□□□ -0.2
GGA3-219ENST00000584550 RTKN2Q8IZC4 609 aa13.78□□□□□ -0.2
GGA3-219ENST00000584550 GPC2Q8N158 579 aa13.78□□□□□ -0.2
GGA3-219ENST00000584550 TRAF5O00463 557 aa13.77□□□□□ -0.21
GGA3-219ENST00000584550 KCNQ3O43525 872 aa13.77□□□□□ -0.21
GGA3-219ENST00000584550 ECE1P42892 770 aa13.77□□□□□ -0.21
GGA3-219ENST00000584550 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
GGA3-219ENST00000584550 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.21
GGA3-219ENST00000584550 KNSTRNQ9Y448 316 aa13.77□□□□□ -0.21
GGA3-219ENST00000584550 CST9Q5W186 159 aa13.76□□□□□ -0.21
GGA3-219ENST00000584550 JDP2Q8WYK2 163 aa13.76□□□□□ -0.21
GGA3-219ENST00000584550 BCORQ6W2J9 1755 aa13.76□□□□□ -0.21
GGA3-219ENST00000584550 PRAMEF22A3QJZ6 481 aa13.75□□□□□ -0.21
GGA3-219ENST00000584550 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
GGA3-219ENST00000584550 EPS15P42566 896 aa13.75□□□□□ -0.21
GGA3-219ENST00000584550 MCOLN1Q9GZU1 580 aa13.75□□□□□ -0.21
GGA3-219ENST00000584550 USP16Q9Y5T5 823 aa13.75□□□□□ -0.21
GGA3-219ENST00000584550 LTBP1Q14766 1721 aa13.75□□□□□ -0.21
GGA3-219ENST00000584550 GNAT3A8MTJ3 354 aa13.74□□□□□ -0.21
GGA3-219ENST00000584550 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
GGA3-219ENST00000584550 EIF6P56537 245 aaKnown RBP13.74□□□□□ -0.21
GGA3-219ENST00000584550 TPTE2Q6XPS3 522 aa13.74□□□□□ -0.21
GGA3-219ENST00000584550 NIP7Q9Y221 180 aaKnown RBP eCLIP13.74□□□□□ -0.21
GGA3-219ENST00000584550 CASP8AP2Q9UKL3 1982 aa13.74□□□□□ -0.21
GGA3-219ENST00000584550 THSD7BQ9C0I4 1608 aa13.73□□□□□ -0.21
GGA3-219ENST00000584550 KLRG2A4D1S0 409 aaPredicted RBP13.73□□□□□ -0.21
GGA3-219ENST00000584550 BTBD11A6QL63 1104 aa13.73□□□□□ -0.21
GGA3-219ENST00000584550 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
GGA3-219ENST00000584550 ALDH1B1P30837 517 aa13.73□□□□□ -0.21
GGA3-219ENST00000584550 SCNN1DP51172 638 aa13.73□□□□□ -0.21
GGA3-219ENST00000584550 ZNF652Q9Y2D9 606 aa13.73□□□□□ -0.21
GGA3-219ENST00000584550 TLL2Q9Y6L7 1015 aa13.73□□□□□ -0.21
GGA3-219ENST00000584550 COL4A5P29400 1685 aa13.72□□□□□ -0.21
GGA3-219ENST00000584550 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
GGA3-219ENST00000584550 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
GGA3-219ENST00000584550 DGKZQ13574 1117 aa13.72□□□□□ -0.21
GGA3-219ENST00000584550 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
GGA3-219ENST00000584550 SIPA1L3O60292 1781 aaPredicted RBP13.72□□□□□ -0.21
GGA3-219ENST00000584550 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.21
GGA3-219ENST00000584550 MAP2K2P36507 400 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms