RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 MS4A1P11836 297 aa23.29■■□□□ 1.32
RFFL-211ENST00000584541 RRP1P56182 461 aaKnown RBP23.29■■□□□ 1.32
RFFL-211ENST00000584541 KSR2Q6VAB6 950 aa23.29■■□□□ 1.32
RFFL-211ENST00000584541 ATF7IPQ6VMQ6 1270 aa23.29■■□□□ 1.32
RFFL-211ENST00000584541 TTLL7Q6ZT98 887 aa23.29■■□□□ 1.32
RFFL-211ENST00000584541 RIC3Q7Z5B4 369 aa23.29■■□□□ 1.32
RFFL-211ENST00000584541 RFC4P35249 363 aa23.28■■□□□ 1.32
RFFL-211ENST00000584541 PLBD2Q8NHP8 589 aa23.28■■□□□ 1.32
RFFL-211ENST00000584541 TBC1D2BQ9UPU7 963 aa23.28■■□□□ 1.32
RFFL-211ENST00000584541 NUP98P52948 1817 aa23.28■■□□□ 1.32
RFFL-211ENST00000584541 MAP3K15Q6ZN16 1313 aa23.28■■□□□ 1.32
RFFL-211ENST00000584541 ZPR1O75312 459 aa23.27■■□□□ 1.32
RFFL-211ENST00000584541 ARHGEF1Q92888 912 aaKnown RBP23.27■■□□□ 1.32
RFFL-211ENST00000584541 ANO8Q9HCE9 1232 aaPredicted RBP23.27■■□□□ 1.32
RFFL-211ENST00000584541 SCN7AQ01118 1682 aa23.27■■□□□ 1.32
RFFL-211ENST00000584541 PI4KAP2A4QPH2 592 aa23.26■■□□□ 1.31
RFFL-211ENST00000584541 ERVV-1B6SEH8 477 aa23.26■■□□□ 1.31
RFFL-211ENST00000584541 FTSJ3Q8IY81 847 aaKnown RBP23.26■■□□□ 1.31
RFFL-211ENST00000584541 PI4KAP1Q8N8J0 262 aa23.26■■□□□ 1.31
RFFL-211ENST00000584541 ZBTB3Q9H5J0 574 aa23.26■■□□□ 1.31
RFFL-211ENST00000584541 MAP3K2Q9Y2U5 619 aa23.26■■□□□ 1.31
RFFL-211ENST00000584541 ANKRD36CQ5JPF3 1778 aa23.25■■□□□ 1.31
RFFL-211ENST00000584541 PLIN1O60240 522 aa23.25■■□□□ 1.31
RFFL-211ENST00000584541 TRIM27P14373 513 aa23.25■■□□□ 1.31
RFFL-211ENST00000584541 DNAAF4Q8WXU2 420 aa23.25■■□□□ 1.31
RFFL-211ENST00000584541 NARFQ9UHQ1 456 aa23.25■■□□□ 1.31
RFFL-211ENST00000584541 ZNF652Q9Y2D9 606 aa23.25■■□□□ 1.31
RFFL-211ENST00000584541 ADCY9O60503 1353 aa23.25■■□□□ 1.31
RFFL-211ENST00000584541 N4BP2Q86UW6 1770 aaPredicted RBP23.24■■□□□ 1.31
RFFL-211ENST00000584541 MSH5O43196 834 aa23.24■■□□□ 1.31
RFFL-211ENST00000584541 SMIM5Q71RC9 77 aa23.24■■□□□ 1.31
RFFL-211ENST00000584541 AMIGO3Q86WK7 504 aa23.24■■□□□ 1.31
RFFL-211ENST00000584541 RNF123Q5XPI4 1314 aa23.24■■□□□ 1.31
RFFL-211ENST00000584541 F6X3S4 739 aa23.23■■□□□ 1.31
RFFL-211ENST00000584541 NEXNQ0ZGT2 675 aa23.23■■□□□ 1.31
RFFL-211ENST00000584541 HSP90AB3PQ58FF7 597 aa23.23■■□□□ 1.31
RFFL-211ENST00000584541 SLC4A10Q6U841 1118 aa23.23■■□□□ 1.31
RFFL-211ENST00000584541 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
RFFL-211ENST00000584541 AFDNP55196 1824 aaKnown RBP23.23■■□□□ 1.31
RFFL-211ENST00000584541 PXDNLA1KZ92 1463 aa23.23■■□□□ 1.31
RFFL-211ENST00000584541 RGL2O15211 777 aa23.22■■□□□ 1.31
RFFL-211ENST00000584541 CAMTA2O94983 1202 aa23.22■■□□□ 1.31
RFFL-211ENST00000584541 GIGYF2Q6Y7W6 1299 aaKnown RBP23.22■■□□□ 1.31
RFFL-211ENST00000584541 CLUAP1Q96AJ1 413 aa23.22■■□□□ 1.31
RFFL-211ENST00000584541 PNPLA7Q6ZV29 1317 aa23.22■■□□□ 1.31
RFFL-211ENST00000584541 USP42Q9H9J4 1324 aaKnown RBP23.22■■□□□ 1.31
RFFL-211ENST00000584541 PDE3AQ14432 1141 aa23.21■■□□□ 1.31
RFFL-211ENST00000584541 CLEC4GQ6UXB4 293 aa23.21■■□□□ 1.31
RFFL-211ENST00000584541 COL23A1Q86Y22 540 aaPredicted RBP23.21■■□□□ 1.31
RFFL-211ENST00000584541 METTL22Q9BUU2 404 aaPredicted RBP23.21■■□□□ 1.31
RFFL-211ENST00000584541 ABCC4O15439 1325 aa23.2■■□□□ 1.3
RFFL-211ENST00000584541 USPL1Q5W0Q7 1092 aa23.2■■□□□ 1.3
RFFL-211ENST00000584541 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
RFFL-211ENST00000584541 CCT4P50991 539 aaKnown RBP23.19■■□□□ 1.3
RFFL-211ENST00000584541 HLFQ16534 295 aa23.19■■□□□ 1.3
RFFL-211ENST00000584541 MYD88Q99836 296 aa23.19■■□□□ 1.3
RFFL-211ENST00000584541 TCIRG1Q13488 830 aa23.18■■□□□ 1.3
RFFL-211ENST00000584541 TNNQ9UQP3 1299 aa23.18■■□□□ 1.3
RFFL-211ENST00000584541 ATP10DQ9P241 1426 aa23.17■■□□□ 1.3
RFFL-211ENST00000584541 LINS1Q8NG48 757 aa23.17■■□□□ 1.3
RFFL-211ENST00000584541 SRCIN1Q9C0H9 1055 aa23.17■■□□□ 1.3
RFFL-211ENST00000584541 PANK1Q8TE04 598 aa23.16■■□□□ 1.3
RFFL-211ENST00000584541 BEND3Q5T5X7 828 aa23.15■■□□□ 1.3
RFFL-211ENST00000584541 INTS3Q68E01 1043 aaKnown RBP23.15■■□□□ 1.3
RFFL-211ENST00000584541 TMEM57Q8N5G2 664 aa23.15■■□□□ 1.3
RFFL-211ENST00000584541 ATP5J2-PTCD1G3V325 749 aa23.14■■□□□ 1.29
RFFL-211ENST00000584541 ALDH1L1O75891 902 aa23.14■■□□□ 1.29
RFFL-211ENST00000584541 RLBP1P12271 317 aa23.14■■□□□ 1.29
RFFL-211ENST00000584541 GYS1P13807 737 aa23.14■■□□□ 1.29
RFFL-211ENST00000584541 ITPRIPQ8IWB1 547 aa23.14■■□□□ 1.29
RFFL-211ENST00000584541 BCL2L12Q9HB09 334 aa23.14■■□□□ 1.29
RFFL-211ENST00000584541 NEFLP07196 543 aa23.13■■□□□ 1.29
RFFL-211ENST00000584541 R3HDM1Q15032 1099 aaKnown RBP23.13■■□□□ 1.29
RFFL-211ENST00000584541 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
RFFL-211ENST00000584541 NLGN1Q8N2Q7 840 aa23.13■■□□□ 1.29
RFFL-211ENST00000584541 ISCA1Q9BUE6 129 aa23.13■■□□□ 1.29
RFFL-211ENST00000584541 NIP7Q9Y221 180 aaKnown RBP eCLIP23.13■■□□□ 1.29
RFFL-211ENST00000584541 NEURL1BA8MQ27 555 aa23.12■■□□□ 1.29
RFFL-211ENST00000584541 GPTP24298 496 aa23.12■■□□□ 1.29
RFFL-211ENST00000584541 TRIM28Q13263 835 aaKnown RBP23.12■■□□□ 1.29
RFFL-211ENST00000584541 MVPQ14764 893 aaKnown RBP23.12■■□□□ 1.29
RFFL-211ENST00000584541 CWF19L2Q2TBE0 894 aaKnown RBP23.12■■□□□ 1.29
RFFL-211ENST00000584541 PARP10Q53GL7 1025 aa23.12■■□□□ 1.29
RFFL-211ENST00000584541 ZNF34Q8IZ26 560 aa23.12■■□□□ 1.29
RFFL-211ENST00000584541 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
RFFL-211ENST00000584541 SLC16A10Q8TF71 515 aa23.12■■□□□ 1.29
RFFL-211ENST00000584541 CWC25Q9NXE8 425 aaPredicted RBP23.12■■□□□ 1.29
RFFL-211ENST00000584541 CASZ1Q86V15 1759 aa23.12■■□□□ 1.29
RFFL-211ENST00000584541 IGKV5-2P06315 115 aa23.11■■□□□ 1.29
RFFL-211ENST00000584541 FKBP8Q14318 412 aa23.11■■□□□ 1.29
RFFL-211ENST00000584541 TBC1D9BQ66K14 1250 aa23.11■■□□□ 1.29
RFFL-211ENST00000584541 SETDB2Q96T68 719 aa23.11■■□□□ 1.29
RFFL-211ENST00000584541 CHMP4BQ9H444 224 aaKnown RBP23.11■■□□□ 1.29
RFFL-211ENST00000584541 COG6Q9Y2V7 657 aa23.11■■□□□ 1.29
RFFL-211ENST00000584541 BICDL1Q6ZP65 573 aa23.1■■□□□ 1.29
RFFL-211ENST00000584541 DDX19BQ9UMR2 479 aa23.1■■□□□ 1.29
RFFL-211ENST00000584541 COL24A1Q17RW2 1714 aa23.1■■□□□ 1.29
RFFL-211ENST00000584541 PPP1R42Q7Z4L9 355 aa23.09■■□□□ 1.29
RFFL-211ENST00000584541 NLRP10Q86W26 655 aa23.09■■□□□ 1.29
RFFL-211ENST00000584541 IBTKQ9P2D0 1353 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms