RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 ITGB4P16144 1822 aa11.85□□□□□ -0.51
SNX11-213ENST00000584335 ERBB4Q15303 1308 aa11.85□□□□□ -0.51
SNX11-213ENST00000584335 VPS72Q15906 364 aa11.84□□□□□ -0.51
SNX11-213ENST00000584335 SMC5Q8IY18 1101 aa11.84□□□□□ -0.51
SNX11-213ENST00000584335 PHAXQ9H814 394 aaKnown RBP11.84□□□□□ -0.51
SNX11-213ENST00000584335 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
SNX11-213ENST00000584335 F6X3S4 739 aa11.83□□□□□ -0.52
SNX11-213ENST00000584335 PDIA6Q15084 440 aa11.83□□□□□ -0.52
SNX11-213ENST00000584335 RPAP2Q8IXW5 612 aaPredicted RBP11.83□□□□□ -0.52
SNX11-213ENST00000584335 TMOD3Q9NYL9 352 aa11.83□□□□□ -0.52
SNX11-213ENST00000584335 BCL9O00512 1426 aa11.83□□□□□ -0.52
SNX11-213ENST00000584335 ADCY9O60503 1353 aa11.82□□□□□ -0.52
SNX11-213ENST00000584335 PRAMEF22A3QJZ6 481 aa11.82□□□□□ -0.52
SNX11-213ENST00000584335 GNAI3P08754 354 aa11.82□□□□□ -0.52
SNX11-213ENST00000584335 DOT1LQ8TEK3 1739 aa11.82□□□□□ -0.52
SNX11-213ENST00000584335 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
SNX11-213ENST00000584335 DDB1Q16531 1140 aa11.81□□□□□ -0.52
SNX11-213ENST00000584335 SLC4A10Q6U841 1118 aa11.81□□□□□ -0.52
SNX11-213ENST00000584335 KSR2Q6VAB6 950 aa11.81□□□□□ -0.52
SNX11-213ENST00000584335 VSIG10Q8N0Z9 540 aa11.81□□□□□ -0.52
SNX11-213ENST00000584335 ANKRD44Q8N8A2 993 aa11.81□□□□□ -0.52
SNX11-213ENST00000584335 DNAAF4Q8WXU2 420 aa11.81□□□□□ -0.52
SNX11-213ENST00000584335 GCC1Q96CN9 775 aa11.81□□□□□ -0.52
SNX11-213ENST00000584335 NGLY1Q96IV0 654 aa11.81□□□□□ -0.52
SNX11-213ENST00000584335 MEIS3Q99687 375 aa11.81□□□□□ -0.52
SNX11-213ENST00000584335 CICQ96RK0 1608 aaPredicted RBP11.81□□□□□ -0.52
SNX11-213ENST00000584335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.8□□□□□ -0.52
SNX11-213ENST00000584335 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
SNX11-213ENST00000584335 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
SNX11-213ENST00000584335 LRP10Q7Z4F1 713 aa11.8□□□□□ -0.52
SNX11-213ENST00000584335 SIRT2Q8IXJ6 389 aa11.8□□□□□ -0.52
SNX11-213ENST00000584335 ZFP91Q96JP5 570 aaPredicted RBP11.8□□□□□ -0.52
SNX11-213ENST00000584335 SRCIN1Q9C0H9 1055 aa11.8□□□□□ -0.52
SNX11-213ENST00000584335 USP16Q9Y5T5 823 aa11.8□□□□□ -0.52
SNX11-213ENST00000584335 THSD7AQ9UPZ6 1657 aa11.8□□□□□ -0.52
SNX11-213ENST00000584335 PI4KAP2A4QPH2 592 aa11.79□□□□□ -0.52
SNX11-213ENST00000584335 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
SNX11-213ENST00000584335 HSPA1LP34931 641 aa11.79□□□□□ -0.52
SNX11-213ENST00000584335 PI4KAP1Q8N8J0 262 aa11.79□□□□□ -0.52
SNX11-213ENST00000584335 PIGBQ92521 554 aa11.79□□□□□ -0.52
SNX11-213ENST00000584335 C8orf37Q96NL8 207 aa11.79□□□□□ -0.52
SNX11-213ENST00000584335 TEX13AQ9BXU3 409 aaPredicted RBP11.79□□□□□ -0.52
SNX11-213ENST00000584335 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
SNX11-213ENST00000584335 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
SNX11-213ENST00000584335 ANXA1P04083 346 aa11.78□□□□□ -0.52
SNX11-213ENST00000584335 GNAI2P04899 355 aa11.78□□□□□ -0.52
SNX11-213ENST00000584335 CEP85Q6P2H3 762 aa11.78□□□□□ -0.52
SNX11-213ENST00000584335 SLC39A7Q92504 469 aa11.78□□□□□ -0.52
SNX11-213ENST00000584335 USP44Q9H0E7 712 aa11.78□□□□□ -0.52
SNX11-213ENST00000584335 C1orf115Q9H7X2 142 aa11.78□□□□□ -0.52
SNX11-213ENST00000584335 ARFGEF2Q9Y6D5 1785 aa11.77□□□□□ -0.52
SNX11-213ENST00000584335 NUCB1Q02818 461 aa11.77□□□□□ -0.53
SNX11-213ENST00000584335 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.53
SNX11-213ENST00000584335 LINS1Q8NG48 757 aa11.77□□□□□ -0.53
SNX11-213ENST00000584335 DCTPP1Q9H773 170 aa11.77□□□□□ -0.53
SNX11-213ENST00000584335 ATG3Q9NT62 314 aa11.77□□□□□ -0.53
SNX11-213ENST00000584335 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
SNX11-213ENST00000584335 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.53
SNX11-213ENST00000584335 CCDC9Q9Y3X0 531 aaKnown RBP11.77□□□□□ -0.53
SNX11-213ENST00000584335 ZNF831Q5JPB2 1677 aa11.77□□□□□ -0.53
SNX11-213ENST00000584335 HMMRO75330 724 aa11.76□□□□□ -0.53
SNX11-213ENST00000584335 USP21Q9UK80 565 aa11.76□□□□□ -0.53
SNX11-213ENST00000584335 ASAP1Q9ULH1 1129 aa11.76□□□□□ -0.53
SNX11-213ENST00000584335 HDAC5Q9UQL6 1122 aa11.76□□□□□ -0.53
SNX11-213ENST00000584335 TJP1Q07157 1748 aa11.76□□□□□ -0.53
SNX11-213ENST00000584335 NUP188Q5SRE5 1749 aa11.76□□□□□ -0.53
SNX11-213ENST00000584335 UTYO14607 1347 aa11.76□□□□□ -0.53
SNX11-213ENST00000584335 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
SNX11-213ENST00000584335 UBTFL1P0CB47 393 aaPredicted RBP11.75□□□□□ -0.53
SNX11-213ENST00000584335 C7P10643 843 aa11.75□□□□□ -0.53
SNX11-213ENST00000584335 ANKRD13DQ6ZTN6 518 aa11.75□□□□□ -0.53
SNX11-213ENST00000584335 COPS6Q7L5N1 327 aa11.75□□□□□ -0.53
SNX11-213ENST00000584335 SKAP1Q86WV1 359 aa11.75□□□□□ -0.53
SNX11-213ENST00000584335 XAGE3Q8WTP9 111 aa11.75□□□□□ -0.53
SNX11-213ENST00000584335 ATRNO75882 1429 aa11.75□□□□□ -0.53
SNX11-213ENST00000584335 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 MYL6BP14649 208 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 PDE4AP27815 886 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 RGS3P49796 1198 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
SNX11-213ENST00000584335 CHD1LQ86WJ1 897 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 PLBD2Q8NHP8 589 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 METTL22Q9BUU2 404 aaPredicted RBP11.74□□□□□ -0.53
SNX11-213ENST00000584335 BACH2Q9BYV9 841 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
SNX11-213ENST00000584335 RREB1Q92766 1687 aa11.74□□□□□ -0.53
SNX11-213ENST00000584335 STK25O00506 426 aa11.73□□□□□ -0.53
SNX11-213ENST00000584335 PRIM1P49642 420 aaKnown RBP11.73□□□□□ -0.53
SNX11-213ENST00000584335 AFF2P51816 1311 aa11.73□□□□□ -0.53
SNX11-213ENST00000584335 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
SNX11-213ENST00000584335 AIMP1Q12904 312 aaKnown RBP11.73□□□□□ -0.53
SNX11-213ENST00000584335 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
SNX11-213ENST00000584335 MEX3CQ5U5Q3 659 aaKnown RBP11.73□□□□□ -0.53
SNX11-213ENST00000584335 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
SNX11-213ENST00000584335 COL15A1P39059 1388 aa11.72□□□□□ -0.53
SNX11-213ENST00000584335 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
SNX11-213ENST00000584335 STARD3NLO95772 234 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms