RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 TRIM35Q9UPQ4 493 aa19.31■□□□□ 0.68
SCN4A-203ENST00000584310 CHD4Q14839 1912 aa19.31■□□□□ 0.68
SCN4A-203ENST00000584310 CHRNA5P30532 468 aa19.3■□□□□ 0.68
SCN4A-203ENST00000584310 IFT57Q9NWB7 429 aa19.3■□□□□ 0.68
SCN4A-203ENST00000584310 KDM3BQ7LBC6 1761 aa19.29■□□□□ 0.68
SCN4A-203ENST00000584310 MAP3K15Q6ZN16 1313 aa19.29■□□□□ 0.68
SCN4A-203ENST00000584310 PRR5LQ6MZQ0 368 aa19.29■□□□□ 0.68
SCN4A-203ENST00000584310 ZNF622Q969S3 477 aaKnown RBP eCLIP19.29■□□□□ 0.68
SCN4A-203ENST00000584310 KIF13BQ9NQT8 1826 aa19.28■□□□□ 0.68
SCN4A-203ENST00000584310 SCN7AQ01118 1682 aa19.28■□□□□ 0.68
SCN4A-203ENST00000584310 HSP90AB3PQ58FF7 597 aa19.28■□□□□ 0.68
SCN4A-203ENST00000584310 HDGFL1Q5TGJ6 251 aa19.28■□□□□ 0.68
SCN4A-203ENST00000584310 CNKSR1Q969H4 720 aa19.28■□□□□ 0.68
SCN4A-203ENST00000584310 LAMB4A4D0S4 1761 aa19.27■□□□□ 0.68
SCN4A-203ENST00000584310 KCNA3P22001 575 aa19.26■□□□□ 0.67
SCN4A-203ENST00000584310 SOGA3Q5TF21 947 aa19.26■□□□□ 0.67
SCN4A-203ENST00000584310 PPP1R42Q7Z4L9 355 aa19.26■□□□□ 0.67
SCN4A-203ENST00000584310 ZBTB3Q9H5J0 574 aa19.26■□□□□ 0.67
SCN4A-203ENST00000584310 GPBP1L1Q9HC44 474 aaPredicted RBP19.26■□□□□ 0.67
SCN4A-203ENST00000584310 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
SCN4A-203ENST00000584310 PARP10Q53GL7 1025 aa19.25■□□□□ 0.67
SCN4A-203ENST00000584310 NECTIN2Q92692 538 aa19.25■□□□□ 0.67
SCN4A-203ENST00000584310 DDX21Q9NR30 783 aaKnown RBP eCLIP19.25■□□□□ 0.67
SCN4A-203ENST00000584310 DBF4Q9UBU7 674 aaPredicted RBP19.25■□□□□ 0.67
SCN4A-203ENST00000584310 MASTLQ96GX5 879 aa19.24■□□□□ 0.67
SCN4A-203ENST00000584310 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
SCN4A-203ENST00000584310 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
SCN4A-203ENST00000584310 AIMP1Q12904 312 aaKnown RBP19.23■□□□□ 0.67
SCN4A-203ENST00000584310 HLFQ16534 295 aa19.23■□□□□ 0.67
SCN4A-203ENST00000584310 CCDC27Q2M243 656 aa19.23■□□□□ 0.67
SCN4A-203ENST00000584310 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
SCN4A-203ENST00000584310 DUSP27Q5VZP5 1158 aa19.23■□□□□ 0.67
SCN4A-203ENST00000584310 STYK1Q6J9G0 422 aa19.23■□□□□ 0.67
SCN4A-203ENST00000584310 GIGYF2Q6Y7W6 1299 aaKnown RBP19.23■□□□□ 0.67
SCN4A-203ENST00000584310 HYPKQ9NX55 129 aa19.23■□□□□ 0.67
SCN4A-203ENST00000584310 TTLL7Q6ZT98 887 aa19.22■□□□□ 0.67
SCN4A-203ENST00000584310 CCDC24Q8N4L8 307 aa19.22■□□□□ 0.67
SCN4A-203ENST00000584310 TMX4Q9H1E5 349 aaPredicted RBP19.22■□□□□ 0.67
SCN4A-203ENST00000584310 NPR1P16066 1061 aa19.21■□□□□ 0.67
SCN4A-203ENST00000584310 ALDH1B1P30837 517 aa19.21■□□□□ 0.67
SCN4A-203ENST00000584310 COPS6Q7L5N1 327 aa19.21■□□□□ 0.67
SCN4A-203ENST00000584310 ATP10DQ9P241 1426 aa19.21■□□□□ 0.67
SCN4A-203ENST00000584310 NRXN2Q9P2S2 1712 aa19.2■□□□□ 0.66
SCN4A-203ENST00000584310 BCORQ6W2J9 1755 aa19.2■□□□□ 0.66
SCN4A-203ENST00000584310 GPTP24298 496 aa19.2■□□□□ 0.66
SCN4A-203ENST00000584310 CCDC184Q52MB2 194 aa19.2■□□□□ 0.66
SCN4A-203ENST00000584310 FAM9BQ8IZU0 186 aa19.2■□□□□ 0.66
SCN4A-203ENST00000584310 XAGE3Q8WTP9 111 aa19.2■□□□□ 0.66
SCN4A-203ENST00000584310 CHPF2Q9P2E5 772 aa19.2■□□□□ 0.66
SCN4A-203ENST00000584310 ZNF853P0CG23 659 aa19.19■□□□□ 0.66
SCN4A-203ENST00000584310 SRGNP10124 158 aa19.19■□□□□ 0.66
SCN4A-203ENST00000584310 GOLGA2Q08379 1002 aa19.19■□□□□ 0.66
SCN4A-203ENST00000584310 CCDC30Q5VVM6 783 aa19.19■□□□□ 0.66
SCN4A-203ENST00000584310 C9orf131Q5VYM1 1079 aa19.19■□□□□ 0.66
SCN4A-203ENST00000584310 ZNF526Q8TF50 670 aaPredicted RBP19.19■□□□□ 0.66
SCN4A-203ENST00000584310 RPGRQ92834 1020 aaKnown RBP19.19■□□□□ 0.66
SCN4A-203ENST00000584310 RNF181Q9P0P0 153 aa19.19■□□□□ 0.66
SCN4A-203ENST00000584310 IBTKQ9P2D0 1353 aaPredicted RBP19.19■□□□□ 0.66
SCN4A-203ENST00000584310 AFDNP55196 1824 aaKnown RBP19.18■□□□□ 0.66
SCN4A-203ENST00000584310 DDX58O95786 925 aaKnown RBP19.18■□□□□ 0.66
SCN4A-203ENST00000584310 UTP14AQ9BVJ6 771 aaKnown RBP19.18■□□□□ 0.66
SCN4A-203ENST00000584310 STK31Q9BXU1 1019 aa19.18■□□□□ 0.66
SCN4A-203ENST00000584310 RNF123Q5XPI4 1314 aa19.18■□□□□ 0.66
SCN4A-203ENST00000584310 ANXA1P04083 346 aa19.17■□□□□ 0.66
SCN4A-203ENST00000584310 LMNB1P20700 586 aa19.17■□□□□ 0.66
SCN4A-203ENST00000584310 PDIA6Q15084 440 aa19.17■□□□□ 0.66
SCN4A-203ENST00000584310 KRT24Q2M2I5 525 aa19.17■□□□□ 0.66
SCN4A-203ENST00000584310 ANKRD13DQ6ZTN6 518 aa19.17■□□□□ 0.66
SCN4A-203ENST00000584310 WWC1Q8IX03 1113 aa19.17■□□□□ 0.66
SCN4A-203ENST00000584310 IL16Q14005 1332 aa19.17■□□□□ 0.66
SCN4A-203ENST00000584310 KDM2BQ8NHM5 1336 aa19.17■□□□□ 0.66
SCN4A-203ENST00000584310 UTRNP46939 3433 aa19.17■□□□□ 0.66
SCN4A-203ENST00000584310 ELL2O00472 640 aaPredicted RBP19.16■□□□□ 0.66
SCN4A-203ENST00000584310 C21orf2O43822 256 aa19.16■□□□□ 0.66
SCN4A-203ENST00000584310 HSP90B1P14625 803 aaKnown RBP19.16■□□□□ 0.66
SCN4A-203ENST00000584310 PROSER3Q2NL68 480 aa19.16■□□□□ 0.66
SCN4A-203ENST00000584310 PRPF40BQ6NWY9 871 aaKnown RBP19.16■□□□□ 0.66
SCN4A-203ENST00000584310 ZNF34Q8IZ26 560 aa19.16■□□□□ 0.66
SCN4A-203ENST00000584310 PLBD2Q8NHP8 589 aa19.16■□□□□ 0.66
SCN4A-203ENST00000584310 NLRP3Q96P20 1036 aa19.16■□□□□ 0.66
SCN4A-203ENST00000584310 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
SCN4A-203ENST00000584310 ZC3H4Q9UPT8 1303 aaKnown RBP19.16■□□□□ 0.66
SCN4A-203ENST00000584310 KIAA1551Q9HCM1 1747 aa19.16■□□□□ 0.66
SCN4A-203ENST00000584310 RIC3Q7Z5B4 369 aa19.15■□□□□ 0.66
SCN4A-203ENST00000584310 NUTM1Q86Y26 1132 aa19.15■□□□□ 0.66
SCN4A-203ENST00000584310 RBM17Q96I25 401 aaKnown RBP19.15■□□□□ 0.66
SCN4A-203ENST00000584310 TCIRG1Q13488 830 aa19.14■□□□□ 0.65
SCN4A-203ENST00000584310 CCDC93Q567U6 631 aa19.14■□□□□ 0.65
SCN4A-203ENST00000584310 SUSD4Q5VX71 490 aa19.14■□□□□ 0.65
SCN4A-203ENST00000584310 WDR63Q8IWG1 891 aa19.14■□□□□ 0.65
SCN4A-203ENST00000584310 C16orf71Q8IYS4 520 aaPredicted RBP19.14■□□□□ 0.65
SCN4A-203ENST00000584310 TAOK3Q9H2K8 898 aa19.14■□□□□ 0.65
SCN4A-203ENST00000584310 SALL2Q9Y467 1007 aaPredicted RBP19.14■□□□□ 0.65
SCN4A-203ENST00000584310 ADCY9O60503 1353 aa19.14■□□□□ 0.65
SCN4A-203ENST00000584310 GOLGB1Q14789 3259 aaKnown RBP19.14■□□□□ 0.65
SCN4A-203ENST00000584310 KLRG2A4D1S0 409 aaPredicted RBP19.13■□□□□ 0.65
SCN4A-203ENST00000584310 ERFEQ4G0M1 354 aa19.13■□□□□ 0.65
SCN4A-203ENST00000584310 GRIPAP1Q4V328 841 aa19.13■□□□□ 0.65
SCN4A-203ENST00000584310 RTKN2Q8IZC4 609 aa19.13■□□□□ 0.65
SCN4A-203ENST00000584310 MYH16Q9H6N6 1097 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms