RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 PCDHGC3Q9UN70 934 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 RAD21O60216 631 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 RNF40O75150 1001 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 CD46P15529 392 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 BRCA1P38398 1863 aaKnown RBP4.16□□□□□ -1.74
CCDC178-213ENST00000583930 RIC1Q4ADV7 1423 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 WAPLQ7Z5K2 1190 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 RETREG2Q8NC44 543 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 RBM46Q8TBY0 533 aaKnown RBP4.16□□□□□ -1.74
CCDC178-213ENST00000583930 ADAMTS19Q8TE59 1207 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 CEMIPQ8WUJ3 1361 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 HEG1Q9ULI3 1381 aa4.16□□□□□ -1.74
CCDC178-213ENST00000583930 NUTM2BA6NNL0 878 aaPredicted RBP4.15□□□□□ -1.74
CCDC178-213ENST00000583930 NUTM2EB1AL46 878 aaPredicted RBP4.15□□□□□ -1.74
CCDC178-213ENST00000583930 FYB1O15117 783 aa4.15□□□□□ -1.74
CCDC178-213ENST00000583930 SLC10A3P09131 477 aa4.15□□□□□ -1.74
CCDC178-213ENST00000583930 HMGB2P26583 209 aaKnown RBP4.15□□□□□ -1.74
CCDC178-213ENST00000583930 CTDSPL2Q05D32 466 aa4.15□□□□□ -1.74
CCDC178-213ENST00000583930 VPS72Q15906 364 aa4.15□□□□□ -1.74
CCDC178-213ENST00000583930 CCDC27Q2M243 656 aa4.15□□□□□ -1.74
CCDC178-213ENST00000583930 NUTM2DQ5VT03 806 aaPredicted RBP4.15□□□□□ -1.74
CCDC178-213ENST00000583930 NUTM2AQ8IVF1 878 aaPredicted RBP4.15□□□□□ -1.74
CCDC178-213ENST00000583930 LRRN4Q8WUT4 740 aa4.15□□□□□ -1.74
CCDC178-213ENST00000583930 HTATSF1O43719 755 aaKnown RBP4.15□□□□□ -1.75
CCDC178-213ENST00000583930 PDIA4P13667 645 aaKnown RBP4.15□□□□□ -1.75
CCDC178-213ENST00000583930 RGL3Q3MIN7 710 aa4.15□□□□□ -1.75
CCDC178-213ENST00000583930 RSBN1LQ6PCB5 846 aaPredicted RBP4.15□□□□□ -1.75
CCDC178-213ENST00000583930 POTEEQ6S8J3 1075 aa4.15□□□□□ -1.75
CCDC178-213ENST00000583930 IP6K1Q92551 441 aa4.15□□□□□ -1.75
CCDC178-213ENST00000583930 TATDN2Q93075 761 aa4.15□□□□□ -1.75
CCDC178-213ENST00000583930 TRAK1Q9UPV9 953 aa4.15□□□□□ -1.75
CCDC178-213ENST00000583930 MYBBP1AQ9BQG0 1328 aaKnown RBP4.15□□□□□ -1.75
CCDC178-213ENST00000583930 ZNF646O15015 1829 aaPredicted RBP4.15□□□□□ -1.75
CCDC178-213ENST00000583930 NUTM1Q86Y26 1132 aa4.15□□□□□ -1.75
CCDC178-213ENST00000583930 POGKQ9P215 609 aa4.15□□□□□ -1.75
CCDC178-213ENST00000583930 PXDNLA1KZ92 1463 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.14□□□□□ -1.75
CCDC178-213ENST00000583930 SPATA31A5Q5VU36 1347 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 SPATA31A7Q8IWB4 1347 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 WDR17Q8IZU2 1322 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 MAP3K5Q99683 1374 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 ARAP2Q8WZ64 1704 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 IRF5Q13568 498 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 PUS10Q3MIT2 529 aaKnown RBP4.14□□□□□ -1.75
CCDC178-213ENST00000583930 KRT28Q7Z3Y7 464 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 NLRP13Q86W25 1043 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 GLMNQ92990 594 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 MARVELD3Q96A59 401 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 ZNF428Q96B54 188 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 KIAA1468Q9P260 1216 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 ERBB3P21860 1342 aa4.14□□□□□ -1.75
CCDC178-213ENST00000583930 GPR37L1O60883 481 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 USP17L8P0C7I0 530 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 VAC14Q08AM6 782 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 CCDC97Q96F63 343 aaPredicted RBP4.13□□□□□ -1.75
CCDC178-213ENST00000583930 TMEM134Q9H6X4 195 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 IL16Q14005 1332 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 MEGF6O75095 1541 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 SPDYE5A6NIY4 337 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 FUT2Q10981 343 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 CALR3Q96L12 384 aaKnown RBP4.13□□□□□ -1.75
CCDC178-213ENST00000583930 CARD10Q9BWT7 1032 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 SWT1Q5T5J6 900 aaKnown RBP4.13□□□□□ -1.75
CCDC178-213ENST00000583930 BCL2L12Q9HB09 334 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 ZNF521Q96K83 1311 aa4.13□□□□□ -1.75
CCDC178-213ENST00000583930 PSME4Q14997 1843 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 ARFGEF1Q9Y6D6 1849 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 LTBP1Q14766 1721 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 SPATA31A1Q5TZJ5 1347 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 TRIM6-TRIM34B2RNG4 842 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 ST18O60284 1047 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 KDM4AO75164 1064 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 PTPREP23469 700 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 IL13P35225 146 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 CABP1Q9NZU7 370 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 NEUROD1Q13562 356 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 DMRTA1Q5VZB9 504 aa4.12□□□□□ -1.75
CCDC178-213ENST00000583930 GJD4Q96KN9 370 aaPredicted RBP4.12□□□□□ -1.75
CCDC178-213ENST00000583930 KIAA0232Q92628 1395 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 CFAP99D6REC4 459 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 LILRB3O75022 631 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 DNAJB2P25686 324 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 DOK7Q18PE1 504 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 PPP4R3BQ5MIZ7 849 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 PLEKHF1Q96S99 279 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 SPTLC1O15269 473 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 HOXA2O43364 376 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 HOXC9P31274 260 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 ORAI2Q96SN7 254 aa4.11□□□□□ -1.75
CCDC178-213ENST00000583930 PRKRIP1Q9H875 184 aaPredicted RBP4.11□□□□□ -1.75
CCDC178-213ENST00000583930 PPP1R3GB7ZBB8 358 aa4.1□□□□□ -1.75
CCDC178-213ENST00000583930 FDX1P10109 184 aa4.1□□□□□ -1.75
CCDC178-213ENST00000583930 HDGFL1Q5TGJ6 251 aa4.1□□□□□ -1.75
CCDC178-213ENST00000583930 TRIM34Q9BYJ4 488 aa4.1□□□□□ -1.75
CCDC178-213ENST00000583930 POLKQ9UBT6 870 aa4.1□□□□□ -1.75
CCDC178-213ENST00000583930 KDM6AO15550 1401 aaPredicted RBP4.1□□□□□ -1.75
CCDC178-213ENST00000583930 MYH3P11055 1940 aa4.1□□□□□ -1.75
CCDC178-213ENST00000583930 COL15A1P39059 1388 aa4.1□□□□□ -1.75
CCDC178-213ENST00000583930 PPP2R1AP30153 589 aa4.1□□□□□ -1.75
CCDC178-213ENST00000583930 PPP2R2DQ66LE6 453 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms