RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 PRAMEF22A3QJZ6 481 aa27.38■■□□□ 1.97
SRSF1-206ENST00000583741 DZIP3Q86Y13 1208 aaKnown RBP27.38■■□□□ 1.97
SRSF1-206ENST00000583741 USP16Q9Y5T5 823 aa27.38■■□□□ 1.97
SRSF1-206ENST00000583741 LTBP3Q9NS15 1303 aa27.37■■□□□ 1.97
SRSF1-206ENST00000583741 SRGNP10124 158 aa27.37■■□□□ 1.97
SRSF1-206ENST00000583741 NPM2Q86SE8 214 aaKnown RBP27.37■■□□□ 1.97
SRSF1-206ENST00000583741 TAOK3Q9H2K8 898 aa27.37■■□□□ 1.97
SRSF1-206ENST00000583741 NPHP1O15259 732 aa27.36■■□□□ 1.97
SRSF1-206ENST00000583741 PRPF40BQ6NWY9 871 aaKnown RBP27.36■■□□□ 1.97
SRSF1-206ENST00000583741 ST5P78524 1137 aa27.35■■□□□ 1.97
SRSF1-206ENST00000583741 STYK1Q6J9G0 422 aa27.35■■□□□ 1.97
SRSF1-206ENST00000583741 CNKSR1Q969H4 720 aa27.34■■□□□ 1.97
SRSF1-206ENST00000583741 MCM10Q7L590 875 aa27.32■■□□□ 1.96
SRSF1-206ENST00000583741 MASTLQ96GX5 879 aa27.32■■□□□ 1.96
SRSF1-206ENST00000583741 DIEXFQ68CQ4 756 aaKnown RBP27.32■■□□□ 1.96
SRSF1-206ENST00000583741 CFAP53Q96M91 514 aa27.32■■□□□ 1.96
SRSF1-206ENST00000583741 DDNO94850 711 aaPredicted RBP27.31■■□□□ 1.96
SRSF1-206ENST00000583741 POTEIP0CG38 1075 aa27.31■■□□□ 1.96
SRSF1-206ENST00000583741 POTEJP0CG39 1038 aa27.31■■□□□ 1.96
SRSF1-206ENST00000583741 DDX10Q13206 875 aaKnown RBP27.31■■□□□ 1.96
SRSF1-206ENST00000583741 NBPF5PQ86XG9 351 aaPredicted RBP27.3■■□□□ 1.96
SRSF1-206ENST00000583741 HSPA1AP0DMV8 641 aaKnown RBP27.29■■□□□ 1.96
SRSF1-206ENST00000583741 HSPA1BP0DMV9 641 aaKnown RBP27.29■■□□□ 1.96
SRSF1-206ENST00000583741 CLEC4GQ6UXB4 293 aa27.29■■□□□ 1.96
SRSF1-206ENST00000583741 SNRPA1P09661 255 aaKnown RBP27.28■■□□□ 1.96
SRSF1-206ENST00000583741 SOGA3Q5TF21 947 aa27.28■■□□□ 1.96
SRSF1-206ENST00000583741 C7orf43Q8WVR3 580 aa27.28■■□□□ 1.96
SRSF1-206ENST00000583741 NBPF26B4DH59 902 aa27.27■■□□□ 1.96
SRSF1-206ENST00000583741 U2AF1L5P0DN76 240 aaPredicted RBP27.27■■□□□ 1.96
SRSF1-206ENST00000583741 U2AF1Q01081 240 aaKnown RBP eCLIP27.27■■□□□ 1.964e-9■■□□□ 14.5
SRSF1-206ENST00000583741 DCTN1Q14203 1278 aa27.27■■□□□ 1.96
SRSF1-206ENST00000583741 CHADLQ6NUI6 762 aa27.27■■□□□ 1.96
SRSF1-206ENST00000583741 NBPF10Q6P3W6 841 aaKnown RBP27.27■■□□□ 1.96
SRSF1-206ENST00000583741 TNS4Q8IZW8 715 aa27.27■■□□□ 1.96
SRSF1-206ENST00000583741 NBPF15Q8N660 670 aa27.27■■□□□ 1.96
SRSF1-206ENST00000583741 RTF1Q92541 710 aaKnown RBP27.26■■□□□ 1.95
SRSF1-206ENST00000583741 NUDCQ9Y266 331 aa27.26■■□□□ 1.95
SRSF1-206ENST00000583741 ZNF652Q9Y2D9 606 aa27.26■■□□□ 1.95
SRSF1-206ENST00000583741 LAMB4A4D0S4 1761 aa27.26■■□□□ 1.95
SRSF1-206ENST00000583741 CAPN15O75808 1086 aa27.25■■□□□ 1.95
SRSF1-206ENST00000583741 SCN4AP35499 1836 aa27.25■■□□□ 1.95
SRSF1-206ENST00000583741 PPP2R1AP30153 589 aa27.25■■□□□ 1.95
SRSF1-206ENST00000583741 KLRG2A4D1S0 409 aaPredicted RBP27.24■■□□□ 1.95
SRSF1-206ENST00000583741 NPR1P16066 1061 aa27.23■■□□□ 1.95
SRSF1-206ENST00000583741 CCDC93Q567U6 631 aa27.23■■□□□ 1.95
SRSF1-206ENST00000583741 OLFM4Q6UX06 510 aa27.23■■□□□ 1.95
SRSF1-206ENST00000583741 CREBZFQ9NS37 354 aa27.23■■□□□ 1.95
SRSF1-206ENST00000583741 NIP7Q9Y221 180 aaKnown RBP eCLIP27.23■■□□□ 1.95
SRSF1-206ENST00000583741 DLG5Q8TDM6 1919 aa27.21■■□□□ 1.95
SRSF1-206ENST00000583741 L3MBTL3Q96JM7 780 aaPredicted RBP27.21■■□□□ 1.95
SRSF1-206ENST00000583741 FAM177BA6PVY3 158 aa27.2■■□□□ 1.95
SRSF1-206ENST00000583741 TPTE2Q6XPS3 522 aa27.2■■□□□ 1.95
SRSF1-206ENST00000583741 MKRN1Q9UHC7 482 aaKnown RBP27.2■■□□□ 1.95
SRSF1-206ENST00000583741 ZNF541Q9H0D2 1346 aa27.2■■□□□ 1.94
SRSF1-206ENST00000583741 KDM3BQ7LBC6 1761 aa27.2■■□□□ 1.94
SRSF1-206ENST00000583741 RGL2O15211 777 aa27.19■■□□□ 1.94
SRSF1-206ENST00000583741 FKBP4Q02790 459 aaKnown RBP eCLIP27.19■■□□□ 1.94
SRSF1-206ENST00000583741 HLFQ16534 295 aa27.19■■□□□ 1.94
SRSF1-206ENST00000583741 ZNF277Q9NRM2 450 aaPredicted RBP27.19■■□□□ 1.94
SRSF1-206ENST00000583741 IQCA1LA6NCM1 817 aa27.19■■□□□ 1.94
SRSF1-206ENST00000583741 HTATSF1O43719 755 aaKnown RBP27.19■■□□□ 1.94
SRSF1-206ENST00000583741 TAF1DQ9H5J8 278 aaPredicted RBP27.19■■□□□ 1.94
SRSF1-206ENST00000583741 MIS18AQ9NYP9 233 aa27.19■■□□□ 1.94
SRSF1-206ENST00000583741 NUP98P52948 1817 aa27.18■■□□□ 1.94
SRSF1-206ENST00000583741 PASKQ96RG2 1323 aa27.17■■□□□ 1.94
SRSF1-206ENST00000583741 ADAMTSL1Q8N6G6 1762 aa27.17■■□□□ 1.94
SRSF1-206ENST00000583741 LDHDQ86WU2 507 aa27.17■■□□□ 1.94
SRSF1-206ENST00000583741 TAF7Q15545 349 aaPredicted RBP27.16■■□□□ 1.94
SRSF1-206ENST00000583741 ABCC12Q96J65 1359 aa27.15■■□□□ 1.94
SRSF1-206ENST00000583741 SNED1Q8TER0 1413 aa27.15■■□□□ 1.94
SRSF1-206ENST00000583741 RTKN2Q8IZC4 609 aa27.13■■□□□ 1.93
SRSF1-206ENST00000583741 CNTNAP1P78357 1384 aa27.13■■□□□ 1.93
SRSF1-206ENST00000583741 ITGBL1O95965 494 aaPredicted RBP27.11■■□□□ 1.93
SRSF1-206ENST00000583741 GTF2E1P29083 439 aaPredicted RBP27.11■■□□□ 1.93
SRSF1-206ENST00000583741 EAPPQ56P03 285 aaPredicted RBP27.11■■□□□ 1.93
SRSF1-206ENST00000583741 NUTM1Q86Y26 1132 aa27.11■■□□□ 1.93
SRSF1-206ENST00000583741 NGEFQ8N5V2 710 aa27.11■■□□□ 1.93
SRSF1-206ENST00000583741 COL4A5P29400 1685 aa27.1■■□□□ 1.93
SRSF1-206ENST00000583741 RNF123Q5XPI4 1314 aa27.1■■□□□ 1.93
SRSF1-206ENST00000583741 ALDH1B1P30837 517 aa27.1■■□□□ 1.93
SRSF1-206ENST00000583741 IARSP41252 1262 aaKnown RBP27.1■■□□□ 1.93
SRSF1-206ENST00000583741 CRY2Q49AN0 593 aa27.1■■□□□ 1.93
SRSF1-206ENST00000583741 HACL1Q9UJ83 578 aa27.1■■□□□ 1.93
SRSF1-206ENST00000583741 FZD9O00144 591 aa27.09■■□□□ 1.93
SRSF1-206ENST00000583741 SYNE4Q8N205 404 aa27.09■■□□□ 1.93
SRSF1-206ENST00000583741 EPHX2P34913 555 aa27.08■■□□□ 1.93
SRSF1-206ENST00000583741 TTLL7Q6ZT98 887 aa27.07■■□□□ 1.92
SRSF1-206ENST00000583741 MAP3K15Q6ZN16 1313 aa27.07■■□□□ 1.92
SRSF1-206ENST00000583741 ERVV-1B6SEH8 477 aa27.06■■□□□ 1.92
SRSF1-206ENST00000583741 UBN2Q6ZU65 1347 aa27.06■■□□□ 1.92
SRSF1-206ENST00000583741 TMEM88BA6NKF7 163 aa27.06■■□□□ 1.92
SRSF1-206ENST00000583741 FOXN1O15353 648 aa27.06■■□□□ 1.92
SRSF1-206ENST00000583741 EIF4A1P60842 406 aaKnown RBP27.06■■□□□ 1.92
SRSF1-206ENST00000583741 PSMD1Q99460 953 aa27.06■■□□□ 1.92
SRSF1-206ENST00000583741 THUMPD2Q9BTF0 503 aaKnown RBP27.06■■□□□ 1.92
SRSF1-206ENST00000583741 NYXQ9GZU5 481 aa27.06■■□□□ 1.92
SRSF1-206ENST00000583741 CLEC11AQ9Y240 323 aa27.06■■□□□ 1.92
SRSF1-206ENST00000583741 RRP7AQ9Y3A4 280 aaKnown RBP27.06■■□□□ 1.92
SRSF1-206ENST00000583741 LTBP1Q14766 1721 aa27.05■■□□□ 1.92
SRSF1-206ENST00000583741 VEGFBP49765 207 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms