RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 EXOC6BQ9Y2D4 811 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 BCL9O00512 1426 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 BTAF1O14981 1849 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 NUP98P52948 1817 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 A0A1B0GUL6 1792 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 ARAP2Q8WZ64 1704 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 ERVV-2B6SEH9 535 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 KSR2Q6VAB6 950 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 TBC1D9Q6ZT07 1266 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 LRP10Q7Z4F1 713 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 PLEKHM2Q8IWE5 1019 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 XAGE3Q8WTP9 111 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 SPEF2Q9C093 1822 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 COL15A1P39059 1388 aa6.82□□□□□ -1.32
CRLF3-204ENST00000583527 DDX60Q8IY21 1712 aaKnown RBP6.81□□□□□ -1.32
CRLF3-204ENST00000583527 UTYO14607 1347 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 AOX1Q06278 1338 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 MYH14Q7Z406 1995 aaKnown RBP6.81□□□□□ -1.32
CRLF3-204ENST00000583527 GRM8O00222 908 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 NBPF7P0C2Y1 421 aaPredicted RBP6.81□□□□□ -1.32
CRLF3-204ENST00000583527 EVA1CP58658 441 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 MTX1Q13505 466 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 CWF19L2Q2TBE0 894 aaKnown RBP6.81□□□□□ -1.32
CRLF3-204ENST00000583527 LINS1Q8NG48 757 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 SSH3Q8TE77 659 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 LRRCC1Q9C099 1032 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 CLEC11AQ9Y240 323 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 MYH7P12883 1935 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 COL24A1Q17RW2 1714 aa6.81□□□□□ -1.32
CRLF3-204ENST00000583527 SBF2Q86WG5 1849 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 NEURL1BA8MQ27 555 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 SRGAP3O43295 1099 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 IGKV5-2P06315 115 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 C4AP0C0L4 1744 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 C4BP0C0L5 1744 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 MYL6BP14649 208 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 MX1P20591 662 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 PIP4K2AP48426 406 aaPredicted RBP6.8□□□□□ -1.32
CRLF3-204ENST00000583527 ATP8B2P98198 1209 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 TSHZ3Q63HK5 1081 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 PPP1R42Q7Z4L9 355 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 SUCLG2Q96I99 432 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 C22orf23Q9BZE7 217 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 TMOD3Q9NYL9 352 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 USP35Q9P2H5 1018 aa6.8□□□□□ -1.32
CRLF3-204ENST00000583527 SPATA31A1Q5TZJ5 1347 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 LY75O60449 1722 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 ZNF609O15014 1411 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 TAF1LQ8IZX4 1826 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 ADAMTS2O95450 1211 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 PDE1AP54750 535 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 NEXNQ0ZGT2 675 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 AIMP1Q12904 312 aaKnown RBP6.79□□□□□ -1.32
CRLF3-204ENST00000583527 BECN1Q14457 450 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 RIC3Q7Z5B4 369 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 C16orf71Q8IYS4 520 aaPredicted RBP6.79□□□□□ -1.32
CRLF3-204ENST00000583527 DDX54Q8TDD1 881 aaKnown RBP6.79□□□□□ -1.32
CRLF3-204ENST00000583527 MYD88Q99836 296 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 BCL11AQ9H165 835 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 OSBPL3Q9H4L5 887 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 C9orf78Q9NZ63 289 aaPredicted RBP6.79□□□□□ -1.32
CRLF3-204ENST00000583527 JCADQ9P266 1359 aa6.79□□□□□ -1.32
CRLF3-204ENST00000583527 RIC1Q4ADV7 1423 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 NBPF26B4DH59 902 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 SDSP20132 328 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 SLC4A3P48751 1232 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 RBM25P49756 843 aaKnown RBP6.78□□□□□ -1.32
CRLF3-204ENST00000583527 NBPF14Q5TI25 921 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 CHADLQ6NUI6 762 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 NBPF10Q6P3W6 841 aaKnown RBP6.78□□□□□ -1.32
CRLF3-204ENST00000583527 COPS6Q7L5N1 327 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 NBPF15Q8N660 670 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 KIF1BPQ96EK5 621 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 METTL22Q9BUU2 404 aaPredicted RBP6.78□□□□□ -1.32
CRLF3-204ENST00000583527 BICC1Q9H694 974 aaKnown RBP6.78□□□□□ -1.32
CRLF3-204ENST00000583527 IL1RAPL2Q9NP60 686 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 DAXXQ9UER7 740 aaPredicted RBP6.78□□□□□ -1.32
CRLF3-204ENST00000583527 USP16Q9Y5T5 823 aa6.78□□□□□ -1.32
CRLF3-204ENST00000583527 SPATA31A5Q5VU36 1347 aa6.77□□□□□ -1.32
CRLF3-204ENST00000583527 SPATA31A7Q8IWB4 1347 aa6.77□□□□□ -1.32
CRLF3-204ENST00000583527 USP42Q9H9J4 1324 aaKnown RBP6.77□□□□□ -1.32
CRLF3-204ENST00000583527 PTCD1O75127 700 aaKnown RBP6.77□□□□□ -1.33
CRLF3-204ENST00000583527 RAB11FIP3O75154 756 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 SURF6O75683 361 aaKnown RBP6.77□□□□□ -1.33
CRLF3-204ENST00000583527 PIP4K2BP78356 416 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 OS9Q13438 667 aaPredicted RBP6.77□□□□□ -1.33
CRLF3-204ENST00000583527 GCKRQ14397 625 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 HSP90AB4PQ58FF6 505 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 CASC1Q6TDU7 716 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 TTLL7Q6ZT98 887 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 ERC1Q8IUD2 1116 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 PLBD2Q8NHP8 589 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 KAZALD1Q96I82 304 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 CDCA7Q9BWT1 371 aaPredicted RBP6.77□□□□□ -1.33
CRLF3-204ENST00000583527 STAP2Q9UGK3 403 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 HDAC5Q9UQL6 1122 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 BCL9LQ86UU0 1499 aa6.77□□□□□ -1.33
CRLF3-204ENST00000583527 NUTM2BA6NNL0 878 aaPredicted RBP6.76□□□□□ -1.33
CRLF3-204ENST00000583527 NUTM2EB1AL46 878 aaPredicted RBP6.76□□□□□ -1.33
CRLF3-204ENST00000583527 TOM1O60784 492 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms