RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 ZSCAN1Q8NBB4 408 aa7.25□□□□□ -1.25
VAPA-206ENST00000583475 MBIPQ9NS73 344 aa7.25□□□□□ -1.25
VAPA-206ENST00000583475 ATXN7L1Q9ULK2 861 aaPredicted RBP7.25□□□□□ -1.25
VAPA-206ENST00000583475 PHF24Q9UPV7 400 aa7.25□□□□□ -1.25
VAPA-206ENST00000583475 GPC6Q9Y625 555 aaPredicted RBP7.25□□□□□ -1.25
VAPA-206ENST00000583475 FOXO3O43524 673 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 PRMT3O60678 531 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 ADAMTS2O95450 1211 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 MX2P20592 715 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 TNP2Q05952 138 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 RHPN1Q8TCX5 695 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 ARID3AQ99856 593 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 SLAIN2Q9P270 581 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 GJA3Q9Y6H8 435 aa7.24□□□□□ -1.25
VAPA-206ENST00000583475 IGF1RP08069 1367 aa7.23□□□□□ -1.25
VAPA-206ENST00000583475 C2CD2LO14523 706 aa7.23□□□□□ -1.25
VAPA-206ENST00000583475 MAPTP10636 758 aaKnown RBP7.23□□□□□ -1.25
VAPA-206ENST00000583475 CTBSQ01459 385 aa7.23□□□□□ -1.25
VAPA-206ENST00000583475 FKBP5Q13451 457 aaPredicted RBP7.23□□□□□ -1.25
VAPA-206ENST00000583475 ZNF280CQ8ND82 737 aa7.23□□□□□ -1.25
VAPA-206ENST00000583475 WHAMMQ8TF30 809 aa7.23□□□□□ -1.25
VAPA-206ENST00000583475 CLP1Q92989 425 aaKnown RBP7.23□□□□□ -1.25
VAPA-206ENST00000583475 NGLY1Q96IV0 654 aa7.23□□□□□ -1.25
VAPA-206ENST00000583475 NEUROD4Q9HD90 331 aa7.23□□□□□ -1.25
VAPA-206ENST00000583475 FGFR3P22607 806 aa7.22□□□□□ -1.25
VAPA-206ENST00000583475 HSH2DQ96JZ2 352 aa7.22□□□□□ -1.25
VAPA-206ENST00000583475 SUSD3Q96L08 255 aa7.22□□□□□ -1.25
VAPA-206ENST00000583475 DCDC2BA2VCK2 349 aa7.21□□□□□ -1.26
VAPA-206ENST00000583475 FAM181BA6NEQ2 426 aa7.21□□□□□ -1.26
VAPA-206ENST00000583475 TMEM88BA6NKF7 163 aa7.21□□□□□ -1.26
VAPA-206ENST00000583475 EFSO43281 561 aa7.21□□□□□ -1.26
VAPA-206ENST00000583475 FAM157BP0CG42 384 aa7.21□□□□□ -1.26
VAPA-206ENST00000583475 RTN1Q16799 776 aa7.21□□□□□ -1.26
VAPA-206ENST00000583475 CXXC1Q9P0U4 656 aaPredicted RBP7.21□□□□□ -1.26
VAPA-206ENST00000583475 ANKIB1Q9P2G1 1089 aa7.21□□□□□ -1.26
VAPA-206ENST00000583475 KHNYNO15037 678 aaKnown RBP7.2□□□□□ -1.26
VAPA-206ENST00000583475 ZNF385CQ66K41 422 aaPredicted RBP7.2□□□□□ -1.26
VAPA-206ENST00000583475 LYPD4Q6UWN0 246 aa7.2□□□□□ -1.26
VAPA-206ENST00000583475 CAPN12Q6ZSI9 719 aa7.2□□□□□ -1.26
VAPA-206ENST00000583475 QTRT2Q9H974 415 aaKnown RBP7.2□□□□□ -1.26
VAPA-206ENST00000583475 STRN4Q9NRL3 753 aa7.2□□□□□ -1.26
VAPA-206ENST00000583475 NSFL1CQ9UNZ2 370 aaKnown RBP7.2□□□□□ -1.26
VAPA-206ENST00000583475 BCS1LQ9Y276 419 aa7.2□□□□□ -1.26
VAPA-206ENST00000583475 FAM182BQ5T319 152 aa7.19□□□□□ -1.26
VAPA-206ENST00000583475 VTI1AQ96AJ9 217 aa7.19□□□□□ -1.26
VAPA-206ENST00000583475 ACDQ96AP0 544 aa7.19□□□□□ -1.26
VAPA-206ENST00000583475 MYO19Q96H55 970 aa7.19□□□□□ -1.26
VAPA-206ENST00000583475 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.19□□□□□ -1.269e-8■■■□□ 18.4
VAPA-206ENST00000583475 CELA2BP08218 269 aaPredicted RBP7.18□□□□□ -1.26
VAPA-206ENST00000583475 CD33P20138 364 aa7.18□□□□□ -1.26
VAPA-206ENST00000583475 MAP2K3P46734 347 aa7.18□□□□□ -1.26
VAPA-206ENST00000583475 SFSWAPQ12872 951 aaKnown RBP7.18□□□□□ -1.26
VAPA-206ENST00000583475 LAMC2Q13753 1193 aa7.18□□□□□ -1.26
VAPA-206ENST00000583475 KLK14Q9P0G3 267 aa7.18□□□□□ -1.26
VAPA-206ENST00000583475 MARK1Q9P0L2 795 aa7.18□□□□□ -1.26
VAPA-206ENST00000583475 DMGDHQ9UI17 866 aaKnown RBP7.18□□□□□ -1.26
VAPA-206ENST00000583475 LRFN2Q9ULH4 789 aa7.18□□□□□ -1.26
VAPA-206ENST00000583475 CARNS1A5YM72 827 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 ARHGEF15O94989 841 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 BMP4P12644 408 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 ATP2B4P23634 1241 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 GRIN2CQ14957 1233 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 HIF1AQ16665 826 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 C11orf91Q3C1V1 193 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 COX20Q5RI15 118 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 BTLAQ7Z6A9 289 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 COL26A1Q96A83 441 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 CEP63Q96MT8 703 aa7.17□□□□□ -1.26
VAPA-206ENST00000583475 TYRO3Q06418 890 aa7.16□□□□□ -1.26
VAPA-206ENST00000583475 DGKZQ13574 1117 aa7.16□□□□□ -1.26
VAPA-206ENST00000583475 IER5Q5VY09 327 aa7.16□□□□□ -1.26
VAPA-206ENST00000583475 OXCT2Q9BYC2 517 aaPredicted RBP7.16□□□□□ -1.26
VAPA-206ENST00000583475 SAP130Q9H0E3 1048 aa7.16□□□□□ -1.26
VAPA-206ENST00000583475 KLF15Q9UIH9 416 aa7.16□□□□□ -1.26
VAPA-206ENST00000583475 TGFBR3LH3BV60 316 aa7.15□□□□□ -1.26
VAPA-206ENST00000583475 BCRP11274 1271 aa7.15□□□□□ -1.26
VAPA-206ENST00000583475 KCNQ4P56696 695 aa7.15□□□□□ -1.26
VAPA-206ENST00000583475 C1orf229Q6ZS94 237 aaPredicted RBP7.15□□□□□ -1.26
VAPA-206ENST00000583475 SVOPQ8N4V2 548 aa7.15□□□□□ -1.26
VAPA-206ENST00000583475 MKNK1Q9BUB5 465 aa7.15□□□□□ -1.26
VAPA-206ENST00000583475 BRD7Q9NPI1 651 aa7.15□□□□□ -1.26
VAPA-206ENST00000583475 SSFA2P28290 1259 aa7.14□□□□□ -1.27
VAPA-206ENST00000583475 SCNN1AP37088 669 aa7.14□□□□□ -1.27
VAPA-206ENST00000583475 NAA30Q147X3 362 aaPredicted RBP7.14□□□□□ -1.27
VAPA-206ENST00000583475 IFT43Q96FT9 208 aa7.14□□□□□ -1.27
VAPA-206ENST00000583475 ADAMTS8Q9UP79 889 aa7.14□□□□□ -1.27
VAPA-206ENST00000583475 KCNH4Q9UQ05 1017 aa7.14□□□□□ -1.27
VAPA-206ENST00000583475 OIP5O43482 229 aa7.13□□□□□ -1.27
VAPA-206ENST00000583475 PTCD1O75127 700 aaKnown RBP7.13□□□□□ -1.27
VAPA-206ENST00000583475 ARAFP10398 606 aa7.13□□□□□ -1.27
VAPA-206ENST00000583475 PHLDB3Q6NSJ2 640 aa7.13□□□□□ -1.27
VAPA-206ENST00000583475 C16orf46Q6P387 395 aa7.13□□□□□ -1.27
VAPA-206ENST00000583475 SLC30A3Q99726 388 aa7.13□□□□□ -1.27
VAPA-206ENST00000583475 LRRC4BQ9NT99 713 aa7.13□□□□□ -1.27
VAPA-206ENST00000583475 SEPT3Q9UH03 358 aa7.13□□□□□ -1.27
VAPA-206ENST00000583475 GGA1Q9UJY5 639 aa7.13□□□□□ -1.27
VAPA-206ENST00000583475 GDF2Q9UK05 429 aaPredicted RBP7.13□□□□□ -1.27
VAPA-206ENST00000583475 OPLAHO14841 1288 aa7.12□□□□□ -1.27
VAPA-206ENST00000583475 MICAL2O94851 1124 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms