RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 C1QTNF8P60827 252 aa20.83■□□□□ 0.93
CDK5RAP3-228ENST00000583363 COPS6Q7L5N1 327 aa20.83■□□□□ 0.93
CDK5RAP3-228ENST00000583363 NLGN2Q8NFZ4 835 aa20.83■□□□□ 0.93
CDK5RAP3-228ENST00000583363 API5Q9BZZ5 524 aaKnown RBP20.83■□□□□ 0.93
CDK5RAP3-228ENST00000583363 TRIM27P14373 513 aa20.82■□□□□ 0.92
CDK5RAP3-228ENST00000583363 PDE3AQ14432 1141 aa20.82■□□□□ 0.92
CDK5RAP3-228ENST00000583363 XAGE3Q8WTP9 111 aa20.82■□□□□ 0.92
CDK5RAP3-228ENST00000583363 MS4A1P11836 297 aa20.81■□□□□ 0.92
CDK5RAP3-228ENST00000583363 EIF5P55010 431 aaKnown RBP20.81■□□□□ 0.92
CDK5RAP3-228ENST00000583363 AIMP1Q12904 312 aaKnown RBP20.81■□□□□ 0.92
CDK5RAP3-228ENST00000583363 FKBP5Q13451 457 aaPredicted RBP20.81■□□□□ 0.92
CDK5RAP3-228ENST00000583363 PELP1Q8IZL8 1130 aaKnown RBP20.81■□□□□ 0.92
CDK5RAP3-228ENST00000583363 TNNQ9UQP3 1299 aa20.81■□□□□ 0.92
CDK5RAP3-228ENST00000583363 MYH14Q7Z406 1995 aaKnown RBP20.8■□□□□ 0.92
CDK5RAP3-228ENST00000583363 C20orf194Q5TEA3 1177 aa20.8■□□□□ 0.92
CDK5RAP3-228ENST00000583363 RPS6KA4O75676 772 aa20.79■□□□□ 0.92
CDK5RAP3-228ENST00000583363 KSR2Q6VAB6 950 aa20.79■□□□□ 0.92
CDK5RAP3-228ENST00000583363 COL23A1Q86Y22 540 aaPredicted RBP20.79■□□□□ 0.92
CDK5RAP3-228ENST00000583363 DZIP1LQ8IYY4 767 aaKnown RBP20.79■□□□□ 0.92
CDK5RAP3-228ENST00000583363 COL5A3P25940 1745 aaPredicted RBP20.78■□□□□ 0.92
CDK5RAP3-228ENST00000583363 PI4KAP2A4QPH2 592 aa20.78■□□□□ 0.92
CDK5RAP3-228ENST00000583363 DDX58O95786 925 aaKnown RBP20.78■□□□□ 0.92
CDK5RAP3-228ENST00000583363 TTLL7Q6ZT98 887 aa20.78■□□□□ 0.92
CDK5RAP3-228ENST00000583363 ANKRD13DQ6ZTN6 518 aa20.78■□□□□ 0.92
CDK5RAP3-228ENST00000583363 PI4KAP1Q8N8J0 262 aa20.78■□□□□ 0.92
CDK5RAP3-228ENST00000583363 CLUAP1Q96AJ1 413 aa20.78■□□□□ 0.92
CDK5RAP3-228ENST00000583363 TAF1LQ8IZX4 1826 aa20.77■□□□□ 0.92
CDK5RAP3-228ENST00000583363 RLBP1P12271 317 aa20.77■□□□□ 0.92
CDK5RAP3-228ENST00000583363 PANK1Q8TE04 598 aa20.77■□□□□ 0.92
CDK5RAP3-228ENST00000583363 F6X3S4 739 aa20.76■□□□□ 0.91
CDK5RAP3-228ENST00000583363 MSH5O43196 834 aa20.76■□□□□ 0.91
CDK5RAP3-228ENST00000583363 PLBD2Q8NHP8 589 aa20.76■□□□□ 0.91
CDK5RAP3-228ENST00000583363 ZNF330Q9Y3S2 320 aaPredicted RBP20.76■□□□□ 0.91
CDK5RAP3-228ENST00000583363 ABCC4O15439 1325 aa20.76■□□□□ 0.91
CDK5RAP3-228ENST00000583363 YBX3P16989 372 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDK5RAP3-228ENST00000583363 RIC3Q7Z5B4 369 aa20.75■□□□□ 0.91
CDK5RAP3-228ENST00000583363 NPM2Q86SE8 214 aaKnown RBP20.75■□□□□ 0.91
CDK5RAP3-228ENST00000583363 FTSJ3Q8IY81 847 aaKnown RBP20.75■□□□□ 0.91
CDK5RAP3-228ENST00000583363 DNAAF4Q8WXU2 420 aa20.75■□□□□ 0.91
CDK5RAP3-228ENST00000583363 AK7Q96M32 723 aa20.75■□□□□ 0.91
CDK5RAP3-228ENST00000583363 MAP3K2Q9Y2U5 619 aa20.75■□□□□ 0.91
CDK5RAP3-228ENST00000583363 RTCBQ9Y3I0 505 aaKnown RBP20.75■□□□□ 0.91
CDK5RAP3-228ENST00000583363 ADCY9O60503 1353 aa20.74■□□□□ 0.91
CDK5RAP3-228ENST00000583363 A0A087WZG4 1122 aa20.74■□□□□ 0.91
CDK5RAP3-228ENST00000583363 GNPATO15228 680 aa20.74■□□□□ 0.91
CDK5RAP3-228ENST00000583363 IRX6P78412 446 aaPredicted RBP20.74■□□□□ 0.91
CDK5RAP3-228ENST00000583363 MSL1Q68DK7 614 aa20.74■□□□□ 0.91
CDK5RAP3-228ENST00000583363 TMEM57Q8N5G2 664 aa20.74■□□□□ 0.91
CDK5RAP3-228ENST00000583363 INTS3Q68E01 1043 aaKnown RBP20.73■□□□□ 0.91
CDK5RAP3-228ENST00000583363 TBC1D2BQ9UPU7 963 aa20.73■□□□□ 0.91
CDK5RAP3-228ENST00000583363 C4BP0C0L5 1744 aa20.73■□□□□ 0.91
CDK5RAP3-228ENST00000583363 ERVV-1B6SEH8 477 aa20.72■□□□□ 0.91
CDK5RAP3-228ENST00000583363 NEFLP07196 543 aa20.72■□□□□ 0.91
CDK5RAP3-228ENST00000583363 SLC4A10Q6U841 1118 aa20.72■□□□□ 0.91
CDK5RAP3-228ENST00000583363 KIF6Q6ZMV9 814 aa20.72■□□□□ 0.91
CDK5RAP3-228ENST00000583363 AMIGO3Q86WK7 504 aa20.72■□□□□ 0.91
CDK5RAP3-228ENST00000583363 DZIP3Q86Y13 1208 aaKnown RBP20.72■□□□□ 0.91
CDK5RAP3-228ENST00000583363 COG6Q9Y2V7 657 aa20.72■□□□□ 0.91
CDK5RAP3-228ENST00000583363 MAP3K15Q6ZN16 1313 aa20.72■□□□□ 0.91
CDK5RAP3-228ENST00000583363 CCT4P50991 539 aaKnown RBP20.71■□□□□ 0.91
CDK5RAP3-228ENST00000583363 TRAPPC3LQ5T215 181 aa20.71■□□□□ 0.91
CDK5RAP3-228ENST00000583363 SMIM5Q71RC9 77 aa20.71■□□□□ 0.91
CDK5RAP3-228ENST00000583363 CRBNQ96SW2 442 aa20.71■□□□□ 0.91
CDK5RAP3-228ENST00000583363 METTL22Q9BUU2 404 aaPredicted RBP20.71■□□□□ 0.91
CDK5RAP3-228ENST00000583363 MVPQ14764 893 aaKnown RBP20.7■□□□□ 0.9
CDK5RAP3-228ENST00000583363 BEND3Q5T5X7 828 aa20.7■□□□□ 0.9
CDK5RAP3-228ENST00000583363 ARHGEF1Q92888 912 aaKnown RBP20.7■□□□□ 0.9
CDK5RAP3-228ENST00000583363 ZBTB3Q9H5J0 574 aa20.7■□□□□ 0.9
CDK5RAP3-228ENST00000583363 COL15A1P39059 1388 aa20.7■□□□□ 0.9
CDK5RAP3-228ENST00000583363 GRIN3BO60391 1043 aa20.69■□□□□ 0.9
CDK5RAP3-228ENST00000583363 CAMTA2O94983 1202 aa20.69■□□□□ 0.9
CDK5RAP3-228ENST00000583363 ADRA2BP18089 450 aa20.69■□□□□ 0.9
CDK5RAP3-228ENST00000583363 SSFA2P28290 1259 aa20.68■□□□□ 0.9
CDK5RAP3-228ENST00000583363 FKBP8Q14318 412 aa20.68■□□□□ 0.9
CDK5RAP3-228ENST00000583363 HLFQ16534 295 aa20.68■□□□□ 0.9
CDK5RAP3-228ENST00000583363 GIGYF2Q6Y7W6 1299 aaKnown RBP20.68■□□□□ 0.9
CDK5RAP3-228ENST00000583363 MYD88Q99836 296 aa20.68■□□□□ 0.9
CDK5RAP3-228ENST00000583363 NARFQ9UHQ1 456 aa20.68■□□□□ 0.9
CDK5RAP3-228ENST00000583363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.67■□□□□ 0.9
CDK5RAP3-228ENST00000583363 TCIRG1Q13488 830 aa20.67■□□□□ 0.9
CDK5RAP3-228ENST00000583363 ITPRIPQ8IWB1 547 aa20.67■□□□□ 0.9
CDK5RAP3-228ENST00000583363 LINS1Q8NG48 757 aa20.67■□□□□ 0.9
CDK5RAP3-228ENST00000583363 EXOC6Q8TAG9 804 aa20.67■□□□□ 0.9
CDK5RAP3-228ENST00000583363 SRCIN1Q9C0H9 1055 aa20.67■□□□□ 0.9
CDK5RAP3-228ENST00000583363 ZBTB7BO15156 539 aaPredicted RBP20.66■□□□□ 0.9
CDK5RAP3-228ENST00000583363 RGL2O15211 777 aa20.66■□□□□ 0.9
CDK5RAP3-228ENST00000583363 ALDH1L1O75891 902 aa20.66■□□□□ 0.9
CDK5RAP3-228ENST00000583363 IGKV5-2P06315 115 aa20.66■□□□□ 0.9
CDK5RAP3-228ENST00000583363 NEXNQ0ZGT2 675 aa20.66■□□□□ 0.9
CDK5RAP3-228ENST00000583363 DDX19BQ9UMR2 479 aa20.66■□□□□ 0.9
CDK5RAP3-228ENST00000583363 ATP10DQ9P241 1426 aa20.66■□□□□ 0.9
CDK5RAP3-228ENST00000583363 UBR3Q6ZT12 1888 aa20.66■□□□□ 0.9
CDK5RAP3-228ENST00000583363 PXDNLA1KZ92 1463 aa20.65■□□□□ 0.9
CDK5RAP3-228ENST00000583363 PHF14O94880 888 aa20.65■□□□□ 0.9
CDK5RAP3-228ENST00000583363 RFC4P35249 363 aa20.65■□□□□ 0.9
CDK5RAP3-228ENST00000583363 HSP90AB3PQ58FF7 597 aa20.65■□□□□ 0.9
CDK5RAP3-228ENST00000583363 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
CDK5RAP3-228ENST00000583363 FLAD1Q8NFF5 587 aa20.65■□□□□ 0.9
CDK5RAP3-228ENST00000583363 ISCA1Q9BUE6 129 aa20.65■□□□□ 0.9
CDK5RAP3-228ENST00000583363 CD2APQ9Y5K6 639 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms